FFCP PHASE1:Hg19::chr17:6659333..6659344,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54739|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30932|TSSclassifier=S|UniProt=|association_with_transcript=-16bp_to_uc002gdp.2,uc002gdq.2,uc002gdr.2_5end|description=CAGE_peak_3_at_XAF1_5end|id=chr17:6659333..6659344,+|ontology_enrichment_celltype=CL:0002031!9.73e-11!124;CL:0002087!1.89e-09!119;CL:0000738!8.39e-09!140;CL:0000037!1.35e-07!172;CL:0000566!1.35e-07!172;CL:0000839!2.03e-07!70;CL:0002057!2.29e-07!42;CL:0002032!2.94e-07!165;CL:0000837!2.94e-07!165|ontology_enrichment_celltype_v019=CL:0000163;2.92e-09;9!CL:0000097;4.53e-09;5!CL:0000860;2.94e-08;33!CL:0002057;2.94e-08;33!CL:0000625;9.05e-07;11|ontology_enrichment_celltype_v019_2=CL:0000163,1.76e-09,9;CL:0000097,3.93e-09,5;CL:0002028,3.93e-09,5;CL:0002031,8.05e-09,120;CL:0000738,2.07e-07,136;CL:0000839,2.80e-07,66;CL:0000860,2.89e-07,42;CL:0002057,2.89e-07,42;CL:0000557,4.29e-07,67|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.36e-08!102;UBERON:0003061!9.36e-08!102;UBERON:0007023!5.14e-07!115;UBERON:0002193!5.97e-07!112;UBERON:0002405!7.38e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-07,76|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.164201178899891,0.787107813136792,0,0,0.464448369948228,0,0,0,0,0,2.05520307534393,0,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0,0,0,0.822335776043652,0,3.16461631554365,1.5369642391746,1.41889337933151,0,0.645484683583826,0,0,0,0.449446968890169,2.14258724659632,0.641858054152187,1.91801137739712,0.659702600373432,1.19678194572979,1.70489900213078,2.03146467040009,2.26954089876456,2.4912889959823,2.51248665256743,2.08593167368081,0.868755378820466,1.81619850790011,1.10483290796269,1.26584954976354,0.845021145247767,0.425208599930087,0.628975936525128,0.561643155732475,0.600707571366025,0.803627933485401,0.570025487482497,1.39241674039363,0.182664153764634,0,0.546138611262131,1.77901850772711,0,0,0.574752439954483,0,0,0.569212969109448,0,1.14681968437569,1.32171328579026,0.560508562981536,0.526768169550154,0.786839080455332,0,0.822405995998037,0.83593247695339,2.28145586643513,1.89379122293893,0,0.668462741311041,0.589211814949674,1.32920336750173,0.541607727530031,1.28091319725675,1.43065282315866,1.31550323682941,0.552700035571697,1.15921234294021,0.741432815810302,1.60524496853828,0,0.339928028092699,1.14966148080576,0.68725489096526,0.759059076058509,1.27426165729639,0.651083453856419,2.85135613334512,1.20460095262218,0.895906278080929,1.24930726552346,1.18388626022008,0,1.20964045934839,1.06976078313403,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0,0.797747763113191,0,1.71598473234038,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,1.03366703667732,0,0.33472061276467,0,0,0,0,0,1.07159673940896,0.22452937262617,0.900891843866578,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.529636723252875,0.286836620748814,0,0,0,0,0.933633106199299,0.538842688278752,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0.323745888736263,0,0.408308342509787,0.122834317311768,0.413303124703062,3.56400857184616,2.22540236350701,0,0,0,0.125118519871964,0,0.438977620880838,0,0.751190294532984,0.340296549480063,0.179389635688862,0,1.05965950579781,0.600182192168805,0.618315175430633,0.772921620136887,1.30281799432113,0.843881661206331,0.487185025805993,0.757301322732344,1.01254888506529,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,2.53510069643662,2.94848165003288,1.77236972004421,0,0.122988438543114,0.171567810298526,0,0,0.402115889646523,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,2.35174979478403,0.567100388969546,0.268675568108545,0,0,2.95597942737566,1.14462964217194,1.24396869324463,1.8735593944205,2.14612136824846,0,0,0,0,0,0,1.14330573052231,0,0,0.2933531432838,0.517086863031111,0,0,1.32969058292435,0,0,0,0,0.714889968290738,0,0,0.325736184293735,1.42156779497018,0,0,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.448340575974109,0.985153801009636,0.431255149719035,1.15508732651774,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.892144943985809,1.26161932027148,0.937131319941706,0.300946099727719,0,0,0,0.184369168541703,1.39013783148933,0,0,0,0.647142602455851,0.640365346820666,0,0,0,0.992431231275107,0.61384789315225,0,0.640695746278505,0.511707249066704,0,0,0.771048469013278,0.355123450626254,0.328508624055237,1.03850885836724,0.232420756919918,0,0,0,0.574072240823034,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0.4385197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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30932 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_uc002gdp.2,uc002gdq.2,uc002gdr.2_5end | |||
|description=CAGE_peak_3_at_XAF1_5end | |||
|id=chr17:6659333..6659344,+ | |||
|ontology_enrichment_celltype=CL:0002031!9.73e-11!124;CL:0002087!1.89e-09!119;CL:0000738!8.39e-09!140;CL:0000037!1.35e-07!172;CL:0000566!1.35e-07!172;CL:0000839!2.03e-07!70;CL:0002057!2.29e-07!42;CL:0002032!2.94e-07!165;CL:0000837!2.94e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000163;2.92e-09;9!CL:0000097;4.53e-09;5!CL:0000860;2.94e-08;33!CL:0002057;2.94e-08;33!CL:0000625;9.05e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000163,1.76e-09,9;CL:0000097,3.93e-09,5;CL:0002028,3.93e-09,5;CL:0002031,8.05e-09,120;CL:0000738,2.07e-07,136;CL:0000839,2.80e-07,66;CL:0000860,2.89e-07,42;CL:0002057,2.89e-07,42;CL:0000557,4.29e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.36e-08!102;UBERON:0003061!9.36e-08!102;UBERON:0007023!5.14e-07!115;UBERON:0002193!5.97e-07!112;UBERON:0002405!7.38e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-07,76 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.164201178899891,0.787107813136792,0,0,0.464448369948228,0,0,0,0,0,2.05520307534393,0,0.601633342410425,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0,0,0,0.822335776043652,0,3.16461631554365,1.5369642391746,1.41889337933151,0,0.645484683583826,0,0,0,0.449446968890169,2.14258724659632,0.641858054152187,1.91801137739712,0.659702600373432,1.19678194572979,1.70489900213078,2.03146467040009,2.26954089876456,2.4912889959823,2.51248665256743,2.08593167368081,0.868755378820466,1.81619850790011,1.10483290796269,1.26584954976354,0.845021145247767,0.425208599930087,0.628975936525128,0.561643155732475,0.600707571366025,0.803627933485401,0.570025487482497,1.39241674039363,0.182664153764634,0,0.546138611262131,1.77901850772711,0,0,0.574752439954483,0,0,0.569212969109448,0,1.14681968437569,1.32171328579026,0.560508562981536,0.526768169550154,0.786839080455332,0,0.822405995998037,0.83593247695339,2.28145586643513,1.89379122293893,0,0.668462741311041,0.589211814949674,1.32920336750173,0.541607727530031,1.28091319725675,1.43065282315866,1.31550323682941,0.552700035571697,1.15921234294021,0.741432815810302,1.60524496853828,0,0.339928028092699,1.14966148080576,0.68725489096526,0.759059076058509,1.27426165729639,0.651083453856419,2.85135613334512,1.20460095262218,0.895906278080929,1.24930726552346,1.18388626022008,0,1.20964045934839,1.06976078313403,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0,0.797747763113191,0,1.71598473234038,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,1.03366703667732,0,0.33472061276467,0,0,0,0,0,1.07159673940896,0.22452937262617,0.900891843866578,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.529636723252875,0.286836620748814,0,0,0,0,0.933633106199299,0.538842688278752,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0.323745888736263,0,0.408308342509787,0.122834317311768,0.413303124703062,3.56400857184616,2.22540236350701,0,0,0,0.125118519871964,0,0.438977620880838,0,0.751190294532984,0.340296549480063,0.179389635688862,0,1.05965950579781,0.600182192168805,0.618315175430633,0.772921620136887,1.30281799432113,0.843881661206331,0.487185025805993,0.757301322732344,1.01254888506529,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,2.53510069643662,2.94848165003288,1.77236972004421,0,0.122988438543114,0.171567810298526,0,0,0.402115889646523,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,2.35174979478403,0.567100388969546,0.268675568108545,0,0,2.95597942737566,1.14462964217194,1.24396869324463,1.8735593944205,2.14612136824846,0,0,0,0,0,0,1.14330573052231,0,0,0.2933531432838,0.517086863031111,0,0,1.32969058292435,0,0,0,0,0.714889968290738,0,0,0.325736184293735,1.42156779497018,0,0,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0.448340575974109,0.985153801009636,0.431255149719035,1.15508732651774,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.892144943985809,1.26161932027148,0.937131319941706,0.300946099727719,0,0,0,0.184369168541703,1.39013783148933,0,0,0,0.647142602455851,0.640365346820666,0,0,0,0.992431231275107,0.61384789315225,0,0.640695746278505,0.511707249066704,0,0,0.771048469013278,0.355123450626254,0.328508624055237,1.03850885836724,0.232420756919918,0,0,0,0.574072240823034,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0.438519753291869,0,0,0.328014645699706,0,0.824328093181778,0,0,0,0,3.21367859688319,0.96670718292122,0,0,0,1.18162269355101,0,0.170453254832202,1.24644849905432,0,0,0,0,0,0.31481234683064,0,2.15623506123262,0,0,0,0.858749320451947,1.86079184679834,0,1.14378116354295,0,0.42793898803392,0,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,4.38684281336312,0,0.682499557039929,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0.633322905892992,0,0,0,0,0,0,0.564862804660675,0,0,0,0.918893600827838,0,0.764637207142375,1.70894156152249,0.714695326373367,1.23408681925858,0.648473311192717,0.540031437238115,0,0,0,0,0,0.432807638929335,0.284567373393656,2.23196781820351,0.199579371432817,0.383010740264733,1.48171507906718,0,0,0.456469358066384,0.47003968731907,0,0,0.481764225311099,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0.333698283423817,0.781552381608161,0,0,0.540911356951966,0,1.4098700508785,0.18714054040822,1.31857361344705,0,0.111443384277478,2.27308917445131,0,0,0,0,1.40669416410513,0.556543525114529,0.659215496907038,0,0.796991953004279,1.10513566212459,0,0,0.369254416383208,0.311039587661807,1.97710372524119,0.537063524026827,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.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| |||
|short_description=p3@XAF1 | |||
}} |
Revision as of 15:15, 11 September 2013
Short description: | p3@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_XAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_uc002gdp.2, uc002gdq.2, uc002gdr.2_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine cell | 1.76e-09 | 9 |
mast cell | 3.93e-09 | 5 |
basophil mast progenitor cell | 3.93e-09 | 5 |
hematopoietic lineage restricted progenitor cell | 8.05e-09 | 120 |
leukocyte | 2.07e-07 | 136 |
myeloid lineage restricted progenitor cell | 2.80e-07 | 66 |
classical monocyte | 2.89e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-07 | 42 |
granulocyte monocyte progenitor cell | 4.29e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.51e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.