FFCP PHASE1:Hg19::chr17:48134072..48134102,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:48134072..48134102,-|id=chr17:48134072..48134102,-|ontology_enrichment_celltype=CL:0000066!7.14e-25!254;CL:0000220!4.37e-19!246;CL:0002321!1.26e-18!248;CL:0000076!6.40e-13!62;CL:0002076!4.52e-12!43;CL:0002077!2.30e-11!33;CL:0000077!7.03e-11!19;CL:0000223!8.07e-11!59;CL:0002368!5.84e-10!13;CL:0000221!2.67e-08!71;CL:0002159!1.73e-07!13;CL:0000548!2.12e-07!679;CL:0000004!2.12e-07!679;CL:0000255!2.12e-07!679;CL:0000012!4.17e-07!682;CL:0002202!6.62e-07!9;CL:0002632!6.62e-07!9|ontology_enrichment_celltype_v019=CL:0002076;1.98e-17;42!CL:0002368;7.25e-17;13!CL:0000244;1.79e-14;4!CL:0000731;1.79e-14;4!CL:0002202;3.64e-14;9!CL:0002632;3.64e-14;9!CL:0002328;5.93e-12;3!CL:0000622;2.74e-11;5!CL:0000154;2.04e-09;6!CL:0002159;1.11e-08;14!CL:0000575;2.02e-08;2!CL:0000317;6.94e-08;2!CL:1000448;6.94e-08;2!CL:0002308;6.94e-08;2!CL:0002140;6.94e-08;2!CL:0002251;1.56e-07;20|ontology_enrichment_celltype_v019_2=CL:0002076,8.93e-23,42;CL:0000223,1.53e-21,58;CL:0000066,2.99e-19,253;CL:0002368,3.02e-17,13;CL:0000244,6.20e-15,4;CL:0000731,6.20e-15,4;CL:0002202,1.91e-14,9;CL:0002632,1.91e-14,9;CL:0002321,6.43e-13,250;CL:0002328,2.59e-12,3;CL:0000622,1.07e-10,5;CL:0000076,1.55e-10,63;CL:0000154,6.25e-09,6;CL:0002159,1.53e-08,14;CL:0000575,1.61e-08,2;CL:0000317,1.35e-07,2;CL:1000448,1.35e-07,2;CL:0002308,1.35e-07,2;CL:0002140,1.35e-07,2;CL:0002251,2.38e-07,20|ontology_enrichment_development_v019=CL:0000223;4.14e-10;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005085!8.69e-08!29;UBERON:0004119!2.44e-07!169;UBERON:0000925!2.44e-07!169;UBERON:0006595!2.44e-07!169;UBERON:0003102!2.86e-07!95;UBERON:0002097!3.63e-07!40;UBERON:0001048!4.68e-07!168|ontology_enrichment_uberon_v019=UBERON:0004815;5.93e-12;3!UBERON:0002031;5.93e-12;3!UBERON:0000365;1.36e-11;5!UBERON:0000486;5.40e-10;12!UBERON:0005910;1.14e-09;6!UBERON:0005911;5.04e-09;36!UBERON:0007196;3.27e-08;15!UBERON:0001558;3.27e-08;15!UBERON:0002419;6.94e-08;2!UBERON:0007771;6.94e-08;2!UBERON:0003297;6.94e-08;2!UBERON:0001821;6.94e-08;2!UBERON:0003487;6.94e-08;2!UBERON:0001820;6.94e-08;2!UBERON:0002185;2.55e-07;5!UBERON:0004807;3.87e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.59e-12,3;UBERON:0002031,2.59e-12,3;UBERON:0000365,5.87e-12,5;UBERON:0005910,5.73e-10,6;UBERON:0007196,2.26e-08,15;UBERON:0001558,2.26e-08,15;UBERON:0003102,6.66e-08,99;UBERON:0002419,1.35e-07,2;UBERON:0007771,1.35e-07,2;UBERON:0003297,1.35e-07,2;UBERON:0001821,1.35e-07,2;UBERON:0003487,1.35e-07,2;UBERON:0001820,1.35e-07,2;UBERON:0005089,1.35e-07,2;UBERON:0005088,1.35e-07,2;UBERON:0000033,1.37e-07,56;UBERON:0002185,1.57e-07,5;UBERON:0001004,2.19e-07,74;UBERON:0004119,8.33e-07,160;UBERON:0000925,8.33e-07,160;UBERON:0006595,8.33e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,3.67768489791571,3.91567694411725,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.702678285545008,0.196468613246569,4.00724817121796,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,1.22595118319608,0,0,1.07633781413317,0.213557388818567,0.211931901159562,0.900273288253207,0,0.257640540045629,0,1.35021065793013,0.292311015483596,0.252433774244115,0.276149695926898,0.969876340912871,0.710019185033229,0.302256294682921,0.508681776931463,1.54608682530637,0.545492241181669,1.14721838155602,0,0,0,0,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0.928735856063958,0,0.236613600079688,0.337169380156203,0,0.441175890929576,0.653638332277218,0.474541238222193,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.98775256867763,0,0.502644862058154,1.38882667737794,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,0.425325291727159,0.985143749731331,1.16253575405585,3.83382679165211,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0.308482478109971,0.600686115687835,0.285826432630578,0.560655421726804,0,0.8800594298514,0.258543431515556,3.57656445851882,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.904318131178758,1.74306691720059,0.99972991182057,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:48134072..48134102,- | |||
|id=chr17:48134072..48134102,- | |||
|ontology_enrichment_celltype=CL:0000066!7.14e-25!254;CL:0000220!4.37e-19!246;CL:0002321!1.26e-18!248;CL:0000076!6.40e-13!62;CL:0002076!4.52e-12!43;CL:0002077!2.30e-11!33;CL:0000077!7.03e-11!19;CL:0000223!8.07e-11!59;CL:0002368!5.84e-10!13;CL:0000221!2.67e-08!71;CL:0002159!1.73e-07!13;CL:0000548!2.12e-07!679;CL:0000004!2.12e-07!679;CL:0000255!2.12e-07!679;CL:0000012!4.17e-07!682;CL:0002202!6.62e-07!9;CL:0002632!6.62e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.98e-17;42!CL:0002368;7.25e-17;13!CL:0000244;1.79e-14;4!CL:0000731;1.79e-14;4!CL:0002202;3.64e-14;9!CL:0002632;3.64e-14;9!CL:0002328;5.93e-12;3!CL:0000622;2.74e-11;5!CL:0000154;2.04e-09;6!CL:0002159;1.11e-08;14!CL:0000575;2.02e-08;2!CL:0000317;6.94e-08;2!CL:1000448;6.94e-08;2!CL:0002308;6.94e-08;2!CL:0002140;6.94e-08;2!CL:0002251;1.56e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.93e-23,42;CL:0000223,1.53e-21,58;CL:0000066,2.99e-19,253;CL:0002368,3.02e-17,13;CL:0000244,6.20e-15,4;CL:0000731,6.20e-15,4;CL:0002202,1.91e-14,9;CL:0002632,1.91e-14,9;CL:0002321,6.43e-13,250;CL:0002328,2.59e-12,3;CL:0000622,1.07e-10,5;CL:0000076,1.55e-10,63;CL:0000154,6.25e-09,6;CL:0002159,1.53e-08,14;CL:0000575,1.61e-08,2;CL:0000317,1.35e-07,2;CL:1000448,1.35e-07,2;CL:0002308,1.35e-07,2;CL:0002140,1.35e-07,2;CL:0002251,2.38e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;4.14e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005085!8.69e-08!29;UBERON:0004119!2.44e-07!169;UBERON:0000925!2.44e-07!169;UBERON:0006595!2.44e-07!169;UBERON:0003102!2.86e-07!95;UBERON:0002097!3.63e-07!40;UBERON:0001048!4.68e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.93e-12;3!UBERON:0002031;5.93e-12;3!UBERON:0000365;1.36e-11;5!UBERON:0000486;5.40e-10;12!UBERON:0005910;1.14e-09;6!UBERON:0005911;5.04e-09;36!UBERON:0007196;3.27e-08;15!UBERON:0001558;3.27e-08;15!UBERON:0002419;6.94e-08;2!UBERON:0007771;6.94e-08;2!UBERON:0003297;6.94e-08;2!UBERON:0001821;6.94e-08;2!UBERON:0003487;6.94e-08;2!UBERON:0001820;6.94e-08;2!UBERON:0002185;2.55e-07;5!UBERON:0004807;3.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.59e-12,3;UBERON:0002031,2.59e-12,3;UBERON:0000365,5.87e-12,5;UBERON:0005910,5.73e-10,6;UBERON:0007196,2.26e-08,15;UBERON:0001558,2.26e-08,15;UBERON:0003102,6.66e-08,99;UBERON:0002419,1.35e-07,2;UBERON:0007771,1.35e-07,2;UBERON:0003297,1.35e-07,2;UBERON:0001821,1.35e-07,2;UBERON:0003487,1.35e-07,2;UBERON:0001820,1.35e-07,2;UBERON:0005089,1.35e-07,2;UBERON:0005088,1.35e-07,2;UBERON:0000033,1.37e-07,56;UBERON:0002185,1.57e-07,5;UBERON:0001004,2.19e-07,74;UBERON:0004119,8.33e-07,160;UBERON:0000925,8.33e-07,160;UBERON:0006595,8.33e-07,160 | |||
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| |||
|short_description=p@chr17:48134072..48134102,- | |||
}} |
Revision as of 14:23, 11 September 2013
Short description: | p@chr17:48134072..48134102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:48134072..48134102, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.93e-23 | 42 |
endodermal cell | 1.53e-21 | 58 |
epithelial cell | 2.99e-19 | 253 |
respiratory epithelial cell | 3.02e-17 | 13 |
transitional epithelial cell | 6.20e-15 | 4 |
urothelial cell | 6.20e-15 | 4 |
epithelial cell of tracheobronchial tree | 1.91e-14 | 9 |
epithelial cell of lower respiratory tract | 1.91e-14 | 9 |
embryonic cell | 6.43e-13 | 250 |
bronchial epithelial cell | 2.59e-12 | 3 |
acinar cell | 1.07e-10 | 5 |
squamous epithelial cell | 1.55e-10 | 63 |
protein secreting cell | 6.25e-09 | 6 |
general ecto-epithelial cell | 1.53e-08 | 14 |
corneal epithelial cell | 1.61e-08 | 2 |
sebum secreting cell | 1.35e-07 | 2 |
epithelial cell of sweat gland | 1.35e-07 | 2 |
epithelial cell of skin gland | 1.35e-07 | 2 |
acinar cell of sebaceous gland | 1.35e-07 | 2 |
epithelial cell of alimentary canal | 2.38e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.59e-12 | 3 |
epithelium of bronchus | 2.59e-12 | 3 |
urothelium | 5.87e-12 | 5 |
transitional epithelium | 5.73e-10 | 6 |
tracheobronchial tree | 2.26e-08 | 15 |
lower respiratory tract | 2.26e-08 | 15 |
surface structure | 6.66e-08 | 99 |
skin gland | 1.35e-07 | 2 |
epidermis gland | 1.35e-07 | 2 |
gland of integumental system | 1.35e-07 | 2 |
sebaceous gland | 1.35e-07 | 2 |
skin sebaceous gland | 1.35e-07 | 2 |
sweat gland | 1.35e-07 | 2 |
sweat gland placode | 1.35e-07 | 2 |
sebaceous gland placode | 1.35e-07 | 2 |
head | 1.37e-07 | 56 |
bronchus | 1.57e-07 | 5 |
respiratory system | 2.19e-07 | 74 |
endoderm-derived structure | 8.33e-07 | 160 |
endoderm | 8.33e-07 | 160 |
presumptive endoderm | 8.33e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.