FFCP PHASE1:Hg19::chr17:4803023..4803037,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100130311|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=37238|TSSclassifier=S|UniProt=Q6ZR85|association_with_transcript=75bp_to_NM_001145536,uc002fzl.3,uc010ckr.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_8_at_C17orf107_5end|id=chr17:4803023..4803037,+|ontology_enrichment_celltype=CL:0000738!1.52e-25!140;CL:0002057!1.80e-24!42;CL:0000766!1.32e-22!76;CL:0000860!2.99e-22!45;CL:0000037!1.36e-19!172;CL:0000566!1.36e-19!172;CL:0002032!5.66e-18!165;CL:0000837!5.66e-18!165;CL:0002031!9.86e-18!124;CL:0000988!1.38e-17!182;CL:0000557!4.56e-17!71;CL:0002087!6.60e-17!119;CL:0000839!6.29e-16!70;CL:0000763!1.25e-15!112;CL:0000049!1.25e-15!112;CL:0002009!1.05e-13!65;CL:0002194!3.75e-13!63;CL:0000576!3.75e-13!63;CL:0000040!3.75e-13!63;CL:0000559!3.75e-13!63;CL:0000094!1.52e-11!8;CL:0002393!5.79e-11!9;CL:0002397!5.79e-11!9;CL:0002322!1.91e-08!5;CL:0000081!5.54e-08!11;CL:0000775!4.43e-07!3;CL:0000898!9.02e-07!3|ontology_enrichment_celltype_v019=CL:0000094;2.90e-29;8!CL:0000775;9.77e-29;3!CL:0000081;2.83e-21;11!CL:0000771;6.74e-20;2!CL:0000815;4.13e-19;2!CL:0000792;4.13e-19;2!CL:0002677;4.13e-19;2!CL:0000097;7.97e-17;5!CL:0000624;4.02e-14;6!CL:0000898;4.55e-13;3!CL:0000226;7.40e-13;3!CL:0000842;7.40e-13;3!CL:0002032;2.87e-10;1!CL:0000557;2.87e-10;1!CL:0000163;1.35e-09;9|ontology_enrichment_celltype_v019_2=CL:0000094,2.66e-29,8;CL:0000775,8.12e-29,3;CL:0000081,2.66e-21,11;CL:0000771,7.08e-20,2;CL:0000815,2.61e-19,2;CL:0000792,2.61e-19,2;CL:0002677,2.61e-19,2;CL:0000738,1.14e-18,136;CL:0000097,8.20e-17,5;CL:0002028,8.20e-17,5;CL:0000037,1.75e-16,168;CL:0000988,1.69e-15,177;CL:0000624,3.14e-14,6;CL:0002032,1.68e-13,161;CL:0000837,1.68e-13,161;CL:0000766,1.81e-13,72;CL:0000898,3.36e-13,3;CL:0000226,6.97e-13,3;CL:0000842,6.97e-13,3;CL:0000763,3.85e-10,108;CL:0000049,3.85e-10,108;CL:0000163,1.37e-09,9;CL:0002031,2.78e-07,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002371!4.35e-14!80;UBERON:0001474!1.79e-13!86;UBERON:0002193!4.01e-13!112;UBERON:0004765!7.11e-11!101;UBERON:0001434!7.11e-11!101;UBERON:0002405!8.33e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0.929716147622738,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0.422510572623884,0.425208599930087,0.209658645508376,4.26848798356681,0.750884464207532,1.12507910687956,0.570025487482497,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0,1.23360899399706,0,2.93330039970231,0.473447805734733,3.89653456815823,0,1.47302953737419,0.886135578334485,0.270803863765016,0,0,0,0,0,0.889719378972363,0,1.04535523804977,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.464775771478074,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90259361757081,1.00883967391873,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,5.99205619157746,2.99161459204025,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.647142602455851,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100130311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37238 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZR85 | |||
|association_with_transcript=75bp_to_NM_001145536,uc002fzl.3,uc010ckr.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_C17orf107_5end | |||
|id=chr17:4803023..4803037,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.52e-25!140;CL:0002057!1.80e-24!42;CL:0000766!1.32e-22!76;CL:0000860!2.99e-22!45;CL:0000037!1.36e-19!172;CL:0000566!1.36e-19!172;CL:0002032!5.66e-18!165;CL:0000837!5.66e-18!165;CL:0002031!9.86e-18!124;CL:0000988!1.38e-17!182;CL:0000557!4.56e-17!71;CL:0002087!6.60e-17!119;CL:0000839!6.29e-16!70;CL:0000763!1.25e-15!112;CL:0000049!1.25e-15!112;CL:0002009!1.05e-13!65;CL:0002194!3.75e-13!63;CL:0000576!3.75e-13!63;CL:0000040!3.75e-13!63;CL:0000559!3.75e-13!63;CL:0000094!1.52e-11!8;CL:0002393!5.79e-11!9;CL:0002397!5.79e-11!9;CL:0002322!1.91e-08!5;CL:0000081!5.54e-08!11;CL:0000775!4.43e-07!3;CL:0000898!9.02e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.90e-29;8!CL:0000775;9.77e-29;3!CL:0000081;2.83e-21;11!CL:0000771;6.74e-20;2!CL:0000815;4.13e-19;2!CL:0000792;4.13e-19;2!CL:0002677;4.13e-19;2!CL:0000097;7.97e-17;5!CL:0000624;4.02e-14;6!CL:0000898;4.55e-13;3!CL:0000226;7.40e-13;3!CL:0000842;7.40e-13;3!CL:0002032;2.87e-10;1!CL:0000557;2.87e-10;1!CL:0000163;1.35e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.66e-29,8;CL:0000775,8.12e-29,3;CL:0000081,2.66e-21,11;CL:0000771,7.08e-20,2;CL:0000815,2.61e-19,2;CL:0000792,2.61e-19,2;CL:0002677,2.61e-19,2;CL:0000738,1.14e-18,136;CL:0000097,8.20e-17,5;CL:0002028,8.20e-17,5;CL:0000037,1.75e-16,168;CL:0000988,1.69e-15,177;CL:0000624,3.14e-14,6;CL:0002032,1.68e-13,161;CL:0000837,1.68e-13,161;CL:0000766,1.81e-13,72;CL:0000898,3.36e-13,3;CL:0000226,6.97e-13,3;CL:0000842,6.97e-13,3;CL:0000763,3.85e-10,108;CL:0000049,3.85e-10,108;CL:0000163,1.37e-09,9;CL:0002031,2.78e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002371!4.35e-14!80;UBERON:0001474!1.79e-13!86;UBERON:0002193!4.01e-13!112;UBERON:0004765!7.11e-11!101;UBERON:0001434!7.11e-11!101;UBERON:0002405!8.33e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0,0,0.929716147622738,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0,0.422510572623884,0.425208599930087,0.209658645508376,4.26848798356681,0.750884464207532,1.12507910687956,0.570025487482497,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0,1.23360899399706,0,2.93330039970231,0.473447805734733,3.89653456815823,0,1.47302953737419,0.886135578334485,0.270803863765016,0,0,0,0,0,0.889719378972363,0,1.04535523804977,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.464775771478074,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90259361757081,1.00883967391873,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,5.99205619157746,2.99161459204025,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.647142602455851,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0.449947783103001,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0,0.250707539292375,0.530450887527676,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@C17orf107 | |||
}} |
Revision as of 14:23, 11 September 2013
Short description: | p8@C17orf107 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_C17orf107_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 75bp_to_NM_001145536, uc002fzl.3, uc010ckr.2_5end |
EntrezGene: | C17orf107 |
HGNC: | 37238 |
UniProt: | Q6ZR85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.66e-29 | 8 |
neutrophil | 8.12e-29 | 3 |
blood cell | 2.66e-21 | 11 |
eosinophil | 7.08e-20 | 2 |
regulatory T cell | 2.61e-19 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.61e-19 | 2 |
naive regulatory T cell | 2.61e-19 | 2 |
leukocyte | 1.14e-18 | 136 |
mast cell | 8.20e-17 | 5 |
basophil mast progenitor cell | 8.20e-17 | 5 |
hematopoietic stem cell | 1.75e-16 | 168 |
hematopoietic cell | 1.69e-15 | 177 |
CD4-positive, alpha-beta T cell | 3.14e-14 | 6 |
hematopoietic oligopotent progenitor cell | 1.68e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-13 | 161 |
myeloid leukocyte | 1.81e-13 | 72 |
naive T cell | 3.36e-13 | 3 |
single nucleate cell | 6.97e-13 | 3 |
mononuclear cell | 6.97e-13 | 3 |
myeloid cell | 3.85e-10 | 108 |
common myeloid progenitor | 3.85e-10 | 108 |
endocrine cell | 1.37e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 2.78e-07 | 120 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.