FFCP PHASE1:Hg19::chr17:47288020..47288029,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51225|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29859|TSSclassifier=W|UniProt=Q9P2A4|association_with_transcript=247bp_to_ENST00000419580_5end|coexpression_cluster_id=C92|description=CAGE_peak_3_at_ABI3_5end|id=chr17:47288020..47288029,+|ontology_enrichment_celltype=CL:0002009!2.03e-31!65;CL:0002194!2.36e-29!63;CL:0000576!2.36e-29!63;CL:0000040!2.36e-29!63;CL:0000559!2.36e-29!63;CL:0002057!4.60e-29!42;CL:0000557!2.49e-27!71;CL:0002087!4.88e-27!119;CL:0000860!3.08e-26!45;CL:0000738!9.12e-26!140;CL:0000766!1.53e-25!76;CL:0000839!8.22e-25!70;CL:0002031!3.25e-24!124;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002032!5.60e-19!165;CL:0000837!5.60e-19!165;CL:0000763!3.48e-18!112;CL:0000049!3.48e-18!112;CL:0000988!4.20e-18!182;CL:0002393!7.81e-10!9;CL:0002397!7.81e-10!9|ontology_enrichment_celltype_v019=CL:0000576;2.38e-33;48!CL:0000860;1.50e-26;33!CL:0002057;1.50e-26;33!CL:0000473;5.97e-21;39!CL:0000234;5.97e-21;39!CL:0000766;5.76e-17;69!CL:0000840;1.51e-15;5!CL:0000875;4.42e-13;3!CL:0002396;4.42e-13;3!CL:0002393;9.14e-11;6!CL:0002397;9.14e-11;6!CL:0000990;2.91e-10;8!CL:0000738;3.30e-10;136!CL:0000763;7.57e-09;100!CL:0000451;2.45e-08;10!CL:0001014;2.56e-08;2!CL:0001016;2.56e-08;2!CL:0002087;1.42e-07;104|ontology_enrichment_celltype_v019_2=CL:0002009,5.16e-55,61;CL:0002194,8.68e-50,59;CL:0000576,8.68e-50,59;CL:0000040,8.68e-50,59;CL:0000559,8.68e-50,59;CL:0000557,1.93e-49,67;CL:0000860,8.94e-47,42;CL:0002057,8.94e-47,42;CL:0000839,8.87e-44,66;CL:0000473,1.53e-43,48;CL:0000234,1.53e-43,48;CL:0000766,1.90e-42,72;CL:0000763,5.26e-32,108;CL:0000049,5.26e-32,108;CL:0002031,7.69e-28,120;CL:0002087,1.51e-25,115;CL:0000738,2.74e-25,136;CL:0002032,1.41e-21,161;CL:0000837,1.41e-21,161;CL:0002393,5.67e-21,9;CL:0002397,5.67e-21,9;CL:0000037,2.54e-20,168;CL:0000988,7.45e-19,177;CL:0000840,1.23e-15,5;CL:0001029,1.23e-15,5;CL:0000875,4.53e-13,3;CL:0002396,4.53e-13,3;CL:0000990,2.54e-10,8;CL:0000451,2.20e-08,10;CL:0001014,2.71e-08,2;CL:0001016,2.71e-08,2|ontology_enrichment_development_v019=CL:0002057;2.54e-34;42!CL:0000049;2.14e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.04e-30!112;UBERON:0002390!1.94e-29!102;UBERON:0003061!1.94e-29!102;UBERON:0007023!3.62e-28!115;UBERON:0002405!1.89e-22!115;UBERON:0002371!2.15e-22!80;UBERON:0001474!1.04e-19!86;UBERON:0004765!2.65e-15!101;UBERON:0001434!2.65e-15!101;UBERON:0003081!9.35e-14!216;UBERON:0001049!7.05e-12!57;UBERON:0005068!7.05e-12!57;UBERON:0006241!7.05e-12!57;UBERON:0007135!7.05e-12!57;UBERON:0002780!6.15e-11!41;UBERON:0001890!6.15e-11!41;UBERON:0006240!6.15e-11!41;UBERON:0003080!1.66e-10!42;UBERON:0002616!2.22e-09!59;UBERON:0002020!1.03e-08!34;UBERON:0003528!1.03e-08!34;UBERON:0001893!1.28e-08!34;UBERON:0002791!3.85e-08!33;UBERON:0001017!9.12e-08!82;UBERON:0005743!1.49e-07!86;UBERON:0000955!2.17e-07!69;UBERON:0006238!2.17e-07!69;UBERON:0001869!3.74e-07!32|ontology_enrichment_uberon_v019=UBERON:0002106;4.69e-12;3!UBERON:0004177;2.15e-07;5!UBERON:0005057;2.15e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-43,98;UBERON:0003061,1.44e-43,98;UBERON:0002371,1.04e-42,76;UBERON:0002405,4.30e-41,93;UBERON:0001474,4.90e-39,82;UBERON:0002193,9.63e-39,108;UBERON:0004765,6.84e-35,90;UBERON:0001434,1.23e-30,100;UBERON:0003081,5.44e-19,203;UBERON:0002204,2.95e-15,167;UBERON:0002106,5.47e-12,3;UBERON:0004854,5.47e-12,3;UBERON:0009034,5.47e-12,3;UBERON:0002095,5.47e-12,3;UBERON:0004782,5.47e-12,3;UBERON:0003281,5.47e-12,3;UBERON:0009664,5.47e-12,3;UBERON:0002296,5.47e-12,3;UBERON:0005602,5.47e-12,3;UBERON:0001179,5.47e-12,3;UBERON:0006293,5.47e-12,3;UBERON:0000926,4.72e-09,315;UBERON:0004120,4.72e-09,315;UBERON:0006603,4.72e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.393553906568396,1.57345710739562,0.383829398097213,0.619264493264304,0,0,0,0,1.56386155736164,0,1.10799081706375,0,0.868043482863407,1.34349284543955,0.32389366601898,2.06060454107349,2.4717700592526,4.91238726795452,7.27752183563449,0.232429036905685,0,0.929119112685311,0.863077176966451,2.30544635876191,1.41889337933151,0,1.29096936716765,0,1.88242339542605,3.27487380069415,1.57306439111559,0.612167784741805,1.60464513538047,0,4.61791820261403,6.78176435913548,7.6720455095885,0.290209238628584,0,0,1.7587406567972,4.69334626578181,2.17188844705117,0.605399502633369,0.368277635987565,0,10.3515090292851,9.56719349842696,6.49941801075965,1.46027220490444,0.600707571366025,0.64290234678832,14.5356499308037,9.34908382835724,8.58521522693779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.657751618414705,0.276350017785848,0,0.296573126324121,0,0,0.453237370790265,0,0,0,0.318565414324097,0,0.950452044448374,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51225 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29859 | |||
|TSSclassifier=W | |||
|UniProt=Q9P2A4 | |||
|association_with_transcript=247bp_to_ENST00000419580_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_3_at_ABI3_5end | |||
|id=chr17:47288020..47288029,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.03e-31!65;CL:0002194!2.36e-29!63;CL:0000576!2.36e-29!63;CL:0000040!2.36e-29!63;CL:0000559!2.36e-29!63;CL:0002057!4.60e-29!42;CL:0000557!2.49e-27!71;CL:0002087!4.88e-27!119;CL:0000860!3.08e-26!45;CL:0000738!9.12e-26!140;CL:0000766!1.53e-25!76;CL:0000839!8.22e-25!70;CL:0002031!3.25e-24!124;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002032!5.60e-19!165;CL:0000837!5.60e-19!165;CL:0000763!3.48e-18!112;CL:0000049!3.48e-18!112;CL:0000988!4.20e-18!182;CL:0002393!7.81e-10!9;CL:0002397!7.81e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.38e-33;48!CL:0000860;1.50e-26;33!CL:0002057;1.50e-26;33!CL:0000473;5.97e-21;39!CL:0000234;5.97e-21;39!CL:0000766;5.76e-17;69!CL:0000840;1.51e-15;5!CL:0000875;4.42e-13;3!CL:0002396;4.42e-13;3!CL:0002393;9.14e-11;6!CL:0002397;9.14e-11;6!CL:0000990;2.91e-10;8!CL:0000738;3.30e-10;136!CL:0000763;7.57e-09;100!CL:0000451;2.45e-08;10!CL:0001014;2.56e-08;2!CL:0001016;2.56e-08;2!CL:0002087;1.42e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.16e-55,61;CL:0002194,8.68e-50,59;CL:0000576,8.68e-50,59;CL:0000040,8.68e-50,59;CL:0000559,8.68e-50,59;CL:0000557,1.93e-49,67;CL:0000860,8.94e-47,42;CL:0002057,8.94e-47,42;CL:0000839,8.87e-44,66;CL:0000473,1.53e-43,48;CL:0000234,1.53e-43,48;CL:0000766,1.90e-42,72;CL:0000763,5.26e-32,108;CL:0000049,5.26e-32,108;CL:0002031,7.69e-28,120;CL:0002087,1.51e-25,115;CL:0000738,2.74e-25,136;CL:0002032,1.41e-21,161;CL:0000837,1.41e-21,161;CL:0002393,5.67e-21,9;CL:0002397,5.67e-21,9;CL:0000037,2.54e-20,168;CL:0000988,7.45e-19,177;CL:0000840,1.23e-15,5;CL:0001029,1.23e-15,5;CL:0000875,4.53e-13,3;CL:0002396,4.53e-13,3;CL:0000990,2.54e-10,8;CL:0000451,2.20e-08,10;CL:0001014,2.71e-08,2;CL:0001016,2.71e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-34;42!CL:0000049;2.14e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.04e-30!112;UBERON:0002390!1.94e-29!102;UBERON:0003061!1.94e-29!102;UBERON:0007023!3.62e-28!115;UBERON:0002405!1.89e-22!115;UBERON:0002371!2.15e-22!80;UBERON:0001474!1.04e-19!86;UBERON:0004765!2.65e-15!101;UBERON:0001434!2.65e-15!101;UBERON:0003081!9.35e-14!216;UBERON:0001049!7.05e-12!57;UBERON:0005068!7.05e-12!57;UBERON:0006241!7.05e-12!57;UBERON:0007135!7.05e-12!57;UBERON:0002780!6.15e-11!41;UBERON:0001890!6.15e-11!41;UBERON:0006240!6.15e-11!41;UBERON:0003080!1.66e-10!42;UBERON:0002616!2.22e-09!59;UBERON:0002020!1.03e-08!34;UBERON:0003528!1.03e-08!34;UBERON:0001893!1.28e-08!34;UBERON:0002791!3.85e-08!33;UBERON:0001017!9.12e-08!82;UBERON:0005743!1.49e-07!86;UBERON:0000955!2.17e-07!69;UBERON:0006238!2.17e-07!69;UBERON:0001869!3.74e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.69e-12;3!UBERON:0004177;2.15e-07;5!UBERON:0005057;2.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-43,98;UBERON:0003061,1.44e-43,98;UBERON:0002371,1.04e-42,76;UBERON:0002405,4.30e-41,93;UBERON:0001474,4.90e-39,82;UBERON:0002193,9.63e-39,108;UBERON:0004765,6.84e-35,90;UBERON:0001434,1.23e-30,100;UBERON:0003081,5.44e-19,203;UBERON:0002204,2.95e-15,167;UBERON:0002106,5.47e-12,3;UBERON:0004854,5.47e-12,3;UBERON:0009034,5.47e-12,3;UBERON:0002095,5.47e-12,3;UBERON:0004782,5.47e-12,3;UBERON:0003281,5.47e-12,3;UBERON:0009664,5.47e-12,3;UBERON:0002296,5.47e-12,3;UBERON:0005602,5.47e-12,3;UBERON:0001179,5.47e-12,3;UBERON:0006293,5.47e-12,3;UBERON:0000926,4.72e-09,315;UBERON:0004120,4.72e-09,315;UBERON:0006603,4.72e-09,315 | |||
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|short_description=p3@ABI3 | |||
}} |
Revision as of 14:20, 11 September 2013
Short description: | p3@ABI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ABI3_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 247bp_to_ENST00000419580_5end |
EntrezGene: | ABI3 |
HGNC: | 29859 |
UniProt: | Q9P2A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-43 | 98 |
blood island | 1.44e-43 | 98 |
bone marrow | 1.04e-42 | 76 |
immune system | 4.30e-41 | 93 |
bone element | 4.90e-39 | 82 |
hemolymphoid system | 9.63e-39 | 108 |
skeletal element | 6.84e-35 | 90 |
skeletal system | 1.23e-30 | 100 |
lateral plate mesoderm | 5.44e-19 | 203 |
musculoskeletal system | 2.95e-15 | 167 |
spleen | 5.47e-12 | 3 |
gastrointestinal system mesentery | 5.47e-12 | 3 |
stomach region | 5.47e-12 | 3 |
mesentery | 5.47e-12 | 3 |
gastrointestinal system serosa | 5.47e-12 | 3 |
mesentery of stomach | 5.47e-12 | 3 |
gut mesentery | 5.47e-12 | 3 |
dorsal mesentery | 5.47e-12 | 3 |
dorsal mesogastrium | 5.47e-12 | 3 |
peritoneal cavity | 5.47e-12 | 3 |
spleen primordium | 5.47e-12 | 3 |
mesoderm | 4.72e-09 | 315 |
mesoderm-derived structure | 4.72e-09 | 315 |
presumptive mesoderm | 4.72e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.