FFCP PHASE1:Hg19::chr17:43045721..43045737,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10882|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24182|TSSclassifier=S|UniProt=O75973|association_with_transcript=-77bp_to_ENST00000253407,NM_006688,uc002ihv.2_5end|coexpression_cluster_id=C2411|description=CAGE_peak_3_at_C1QL1_5end|id=chr17:43045721..43045737,-|ontology_enrichment_celltype=CL:0002319!1.52e-14!25;CL:0000095!5.09e-09!17;CL:0000123!5.09e-09!17;CL:0000133!9.84e-09!59;CL:0000243!8.50e-08!15;CL:0000125!8.50e-08!15;CL:0000030!8.50e-08!15;CL:0000339!8.50e-08!15;CL:0000128!2.21e-07!7;CL:0000126!2.21e-07!7;CL:0000127!2.21e-07!7;CL:0002453!2.21e-07!7;CL:0000047!2.43e-07!8|ontology_enrichment_celltype_v019=CL:0002319;3.85e-15;25!CL:0000128;7.95e-12;7!CL:0000126;7.95e-12;7!CL:0000127;7.95e-12;7!CL:0002605;4.80e-08;3!CL:0000095;6.52e-08;17!CL:0002603;1.41e-07;3!CL:0000333;2.20e-07;5!CL:0000243;2.93e-07;15!CL:0000125;2.93e-07;15|ontology_enrichment_celltype_v019_2=CL:0002319,3.36e-15,25;CL:0000128,5.80e-12,7;CL:0000126,5.80e-12,7;CL:0000127,5.80e-12,7;CL:0002453,5.80e-12,7;CL:0000047,7.48e-10,8;CL:0000133,3.05e-09,59;CL:0002605,4.32e-08,3;CL:0000095,5.95e-08,17;CL:0000123,5.95e-08,17;CL:0002603,1.07e-07,3;CL:0000243,2.30e-07,15;CL:0000125,2.30e-07,15;CL:0000030,2.30e-07,15;CL:0000339,2.30e-07,15;CL:0000221,9.07e-07,72|ontology_enrichment_development_v019=CL:0000339;2.93e-07;15|ontology_enrichment_disease=DOID:0050687!2.15e-15!143;DOID:162!3.04e-11!235;DOID:14566!2.04e-10!239;DOID:305!7.32e-09!106|ontology_enrichment_disease_v019=DOID:171;3.29e-07;10|ontology_enrichment_disease_v019_2=DOID:0050687,1.44e-08,143;DOID:171,8.84e-07,10|ontology_enrichment_uberon=UBERON:0000073!3.38e-38!94;UBERON:0001016!3.38e-38!94;UBERON:0001017!6.17e-38!82;UBERON:0005743!1.77e-37!86;UBERON:0000955!2.04e-29!69;UBERON:0006238!2.04e-29!69;UBERON:0001049!6.20e-28!57;UBERON:0005068!6.20e-28!57;UBERON:0006241!6.20e-28!57;UBERON:0007135!6.20e-28!57;UBERON:0002346!1.71e-27!90;UBERON:0003075!1.05e-25!86;UBERON:0007284!1.05e-25!86;UBERON:0000924!7.23e-24!173;UBERON:0006601!7.23e-24!173;UBERON:0002616!4.09e-23!59;UBERON:0004121!2.72e-22!169;UBERON:0001893!1.76e-19!34;UBERON:0002020!1.99e-19!34;UBERON:0003528!1.99e-19!34;UBERON:0003080!3.04e-19!42;UBERON:0002791!6.31e-19!33;UBERON:0002780!1.06e-18!41;UBERON:0001890!1.06e-18!41;UBERON:0006240!1.06e-18!41;UBERON:0001869!3.44e-18!32;UBERON:0003056!2.53e-17!61;UBERON:0000033!1.55e-16!123;UBERON:0000153!3.56e-15!129;UBERON:0007811!3.56e-15!129;UBERON:0000956!5.01e-14!25;UBERON:0000203!5.01e-14!25;UBERON:0002619!1.90e-11!22;UBERON:0001950!3.35e-10!20;UBERON:0003076!6.14e-10!15;UBERON:0003057!6.14e-10!15;UBERON:0000064!1.48e-09!219;UBERON:0007023!6.74e-09!115;UBERON:0004733!5.30e-08!12;UBERON:0002028!5.30e-08!12;UBERON:0007277!5.30e-08!12;UBERON:0002420!2.11e-07!9;UBERON:0007245!2.11e-07!9;UBERON:0010009!2.11e-07!9;UBERON:0010011!2.11e-07!9;UBERON:0000454!2.11e-07!9;UBERON:0004732!4.17e-07!13;UBERON:0002308!6.58e-07!9;UBERON:0000125!6.58e-07!9;UBERON:0000477!8.26e-07!286;UBERON:0002298!8.98e-07!8|ontology_enrichment_uberon_v019=UBERON:0000956;1.57e-14;25!UBERON:0000203;1.57e-14;25!UBERON:0001893;5.85e-12;34!UBERON:0003528;6.45e-12;34!UBERON:0002020;6.45e-12;34!UBERON:0002791;2.07e-11;32!UBERON:0001869;2.07e-11;32!UBERON:0000073;2.59e-10;53!UBERON:0002616;2.59e-10;53!UBERON:0002619;5.02e-10;22!UBERON:0001950;2.26e-09;20!UBERON:0001016;2.12e-08;83!UBERON:0002780;2.15e-08;41!UBERON:0001890;2.15e-08;41!UBERON:0004733;4.05e-08;12!UBERON:0002028;4.05e-08;12!UBERON:0004732;2.09e-07;13!UBERON:0001017;2.15e-07;75!UBERON:0000013;2.20e-07;5!UBERON:0002410;2.20e-07;5!UBERON:0001896;3.27e-07;3!UBERON:0005290;3.27e-07;3!UBERON:0000955;5.33e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.37e-28,89;UBERON:0001017,3.70e-25,81;UBERON:0001049,4.41e-18,56;UBERON:0005068,4.41e-18,56;UBERON:0006241,4.41e-18,56;UBERON:0007135,4.41e-18,56;UBERON:0000955,1.59e-17,68;UBERON:0006238,1.59e-17,68;UBERON:0000073,3.32e-16,53;UBERON:0002616,3.32e-16,53;UBERON:0002346,5.09e-16,86;UBERON:0004121,3.33e-15,171;UBERON:0000924,3.33e-15,171;UBERON:0006601,3.33e-15,171;UBERON:0003075,7.39e-15,82;UBERON:0007284,7.39e-15,82;UBERON:0000956,1.74e-14,25;UBERON:0000203,1.74e-14,25;UBERON:0011216,5.47e-14,223;UBERON:0003528,6.22e-13,34;UBERON:0002020,6.22e-13,34;UBERON:0001893,7.71e-13,34;UBERON:0002791,3.26e-12,32;UBERON:0001869,3.26e-12,32;UBERON:0010371,5.83e-11,104;UBERON:0003076,1.59e-10,15;UBERON:0003057,1.59e-10,15;UBERON:0002780,5.40e-10,41;UBERON:0001890,5.40e-10,41;UBERON:0003080,5.40e-10,41;UBERON:0006240,5.40e-10,41;UBERON:0002619,5.71e-10,22;UBERON:0003056,2.10e-09,61;UBERON:0001950,2.58e-09,20;UBERON:0004733,1.82e-08,12;UBERON:0002028,1.82e-08,12;UBERON:0007277,1.82e-08,12;UBERON:0010314,7.84e-08,132;UBERON:0004732,1.01e-07,13;UBERON:0001896,1.28e-07,3;UBERON:0005290,1.28e-07,3;UBERON:0010096,1.28e-07,3;UBERON:0000013,4.19e-07,5;UBERON:0002410,4.19e-07,5;UBERON:0001872,8.34e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.3712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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24182 | |||
|TSSclassifier=S | |||
|UniProt=O75973 | |||
|association_with_transcript=-77bp_to_ENST00000253407,NM_006688,uc002ihv.2_5end | |||
|coexpression_cluster_id=C2411 | |||
|description=CAGE_peak_3_at_C1QL1_5end | |||
|id=chr17:43045721..43045737,- | |||
|ontology_enrichment_celltype=CL:0002319!1.52e-14!25;CL:0000095!5.09e-09!17;CL:0000123!5.09e-09!17;CL:0000133!9.84e-09!59;CL:0000243!8.50e-08!15;CL:0000125!8.50e-08!15;CL:0000030!8.50e-08!15;CL:0000339!8.50e-08!15;CL:0000128!2.21e-07!7;CL:0000126!2.21e-07!7;CL:0000127!2.21e-07!7;CL:0002453!2.21e-07!7;CL:0000047!2.43e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.85e-15;25!CL:0000128;7.95e-12;7!CL:0000126;7.95e-12;7!CL:0000127;7.95e-12;7!CL:0002605;4.80e-08;3!CL:0000095;6.52e-08;17!CL:0002603;1.41e-07;3!CL:0000333;2.20e-07;5!CL:0000243;2.93e-07;15!CL:0000125;2.93e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.36e-15,25;CL:0000128,5.80e-12,7;CL:0000126,5.80e-12,7;CL:0000127,5.80e-12,7;CL:0002453,5.80e-12,7;CL:0000047,7.48e-10,8;CL:0000133,3.05e-09,59;CL:0002605,4.32e-08,3;CL:0000095,5.95e-08,17;CL:0000123,5.95e-08,17;CL:0002603,1.07e-07,3;CL:0000243,2.30e-07,15;CL:0000125,2.30e-07,15;CL:0000030,2.30e-07,15;CL:0000339,2.30e-07,15;CL:0000221,9.07e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000339;2.93e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!2.15e-15!143;DOID:162!3.04e-11!235;DOID:14566!2.04e-10!239;DOID:305!7.32e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:171;3.29e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.44e-08,143;DOID:171,8.84e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.38e-38!94;UBERON:0001016!3.38e-38!94;UBERON:0001017!6.17e-38!82;UBERON:0005743!1.77e-37!86;UBERON:0000955!2.04e-29!69;UBERON:0006238!2.04e-29!69;UBERON:0001049!6.20e-28!57;UBERON:0005068!6.20e-28!57;UBERON:0006241!6.20e-28!57;UBERON:0007135!6.20e-28!57;UBERON:0002346!1.71e-27!90;UBERON:0003075!1.05e-25!86;UBERON:0007284!1.05e-25!86;UBERON:0000924!7.23e-24!173;UBERON:0006601!7.23e-24!173;UBERON:0002616!4.09e-23!59;UBERON:0004121!2.72e-22!169;UBERON:0001893!1.76e-19!34;UBERON:0002020!1.99e-19!34;UBERON:0003528!1.99e-19!34;UBERON:0003080!3.04e-19!42;UBERON:0002791!6.31e-19!33;UBERON:0002780!1.06e-18!41;UBERON:0001890!1.06e-18!41;UBERON:0006240!1.06e-18!41;UBERON:0001869!3.44e-18!32;UBERON:0003056!2.53e-17!61;UBERON:0000033!1.55e-16!123;UBERON:0000153!3.56e-15!129;UBERON:0007811!3.56e-15!129;UBERON:0000956!5.01e-14!25;UBERON:0000203!5.01e-14!25;UBERON:0002619!1.90e-11!22;UBERON:0001950!3.35e-10!20;UBERON:0003076!6.14e-10!15;UBERON:0003057!6.14e-10!15;UBERON:0000064!1.48e-09!219;UBERON:0007023!6.74e-09!115;UBERON:0004733!5.30e-08!12;UBERON:0002028!5.30e-08!12;UBERON:0007277!5.30e-08!12;UBERON:0002420!2.11e-07!9;UBERON:0007245!2.11e-07!9;UBERON:0010009!2.11e-07!9;UBERON:0010011!2.11e-07!9;UBERON:0000454!2.11e-07!9;UBERON:0004732!4.17e-07!13;UBERON:0002308!6.58e-07!9;UBERON:0000125!6.58e-07!9;UBERON:0000477!8.26e-07!286;UBERON:0002298!8.98e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.57e-14;25!UBERON:0000203;1.57e-14;25!UBERON:0001893;5.85e-12;34!UBERON:0003528;6.45e-12;34!UBERON:0002020;6.45e-12;34!UBERON:0002791;2.07e-11;32!UBERON:0001869;2.07e-11;32!UBERON:0000073;2.59e-10;53!UBERON:0002616;2.59e-10;53!UBERON:0002619;5.02e-10;22!UBERON:0001950;2.26e-09;20!UBERON:0001016;2.12e-08;83!UBERON:0002780;2.15e-08;41!UBERON:0001890;2.15e-08;41!UBERON:0004733;4.05e-08;12!UBERON:0002028;4.05e-08;12!UBERON:0004732;2.09e-07;13!UBERON:0001017;2.15e-07;75!UBERON:0000013;2.20e-07;5!UBERON:0002410;2.20e-07;5!UBERON:0001896;3.27e-07;3!UBERON:0005290;3.27e-07;3!UBERON:0000955;5.33e-07;68 | |||
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| |||
|short_description=p3@C1QL1 | |||
}} |
Revision as of 14:01, 11 September 2013
Short description: | p3@C1QL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C1QL1_5end |
Coexpression cluster: | C2411_renal_anaplastic_medulla_argyrophil_Astrocyte_pleomorphic_mesothelioma |
Association with transcript: | -77bp_to_ENST00000253407, NM_006688, uc002ihv.2_5end |
EntrezGene: | C1QL1 |
HGNC: | 24182 |
UniProt: | O75973 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.36e-15 | 25 |
oligodendrocyte | 5.80e-12 | 7 |
macroglial cell | 5.80e-12 | 7 |
astrocyte | 5.80e-12 | 7 |
oligodendrocyte precursor cell | 5.80e-12 | 7 |
neuronal stem cell | 7.48e-10 | 8 |
neurectodermal cell | 3.05e-09 | 59 |
astrocyte of the cerebral cortex | 4.32e-08 | 3 |
neuron associated cell | 5.95e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.95e-08 | 17 |
astrocyte of the cerebellum | 1.07e-07 | 3 |
glial cell (sensu Vertebrata) | 2.30e-07 | 15 |
glial cell | 2.30e-07 | 15 |
glioblast | 2.30e-07 | 15 |
glioblast (sensu Vertebrata) | 2.30e-07 | 15 |
ectodermal cell | 9.07e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.44e-08 | 143 |
neuroectodermal tumor | 8.84e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.