FFCP PHASE1:Hg19::chr17:41738684..41738704,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4222|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7013|TSSclassifier=N|UniProt=|association_with_transcript=197bp_to_AB527749,CU686836,EU446636_5end|coexpression_cluster_id=C3636|description=CAGE_peak_2_at_MEOX1_5end|id=chr17:41738684..41738704,-|ontology_enrichment_celltype=CL:0000791!1.85e-20!18;CL:0000789!1.85e-20!18;CL:0002420!1.85e-20!18;CL:0002419!1.85e-20!18;CL:0000790!1.85e-20!18;CL:0000084!2.11e-15!25;CL:0000827!2.11e-15!25;CL:0000625!3.08e-13!11;CL:0000838!3.45e-11!52;CL:0000542!7.44e-11!53;CL:0000051!7.44e-11!53;CL:0000624!1.80e-10!6|ontology_enrichment_celltype_v019=CL:0000791;7.08e-15;18!CL:0000789;7.08e-15;18!CL:0002419;7.08e-15;18!CL:0000084;2.73e-12;25!CL:0000625;3.41e-09;11!CL:0000624;1.63e-08;6|ontology_enrichment_celltype_v019_2=CL:0000791,4.63e-15,18;CL:0000789,4.63e-15,18;CL:0002420,4.63e-15,18;CL:0002419,4.63e-15,18;CL:0000790,4.63e-15,18;CL:0000084,1.96e-12,25;CL:0000827,1.96e-12,25;CL:0000625,2.31e-09,11;CL:0000624,1.57e-08,6|ontology_enrichment_development_v019=CL:0000790;7.08e-15;18!UBERON:0005062;3.15e-08;4!UBERON:0007284;3.15e-08;4!UBERON:0004872;2.18e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.32e-24!115;UBERON:0003978!8.69e-07!3;UBERON:0009751!8.69e-07!3;UBERON:0000946!8.69e-07!3;UBERON:0002523!8.69e-07!3;UBERON:0005983!8.69e-07!3;UBERON:0002165!8.69e-07!3;UBERON:0002062!8.69e-07!3;UBERON:0007280!8.69e-07!3|ontology_enrichment_uberon_v019=UBERON:0003978;7.36e-11;3!UBERON:0000946;7.36e-11;3!UBERON:0002081;9.53e-08;2!UBERON:0002133;9.53e-08;2!UBERON:0003127;3.24e-07;2!UBERON:0005090;9.01e-07;2!UBERON:0001829;9.01e-07;2!UBERON:0001630;9.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.52e-22,114;UBERON:0003978,7.79e-11,3;UBERON:0009751,7.79e-11,3;UBERON:0000946,7.79e-11,3;UBERON:0002523,7.79e-11,3;UBERON:0005983,7.79e-11,3;UBERON:0002165,7.79e-11,3;UBERON:0002062,7.79e-11,3;UBERON:0007280,7.79e-11,3;UBERON:0002133,9.58e-08,2;UBERON:0002081,1.06e-07,2;UBERON:0010227,1.06e-07,2;UBERON:0003127,2.50e-07,2;UBERON:0005090,9.05e-07,2;UBERON:0001630,9.05e-07,2;UBERON:0001829,9.61e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,1.17903228824749,1.85041349099558,0.334372990781356,0.977766799900771,0,1.94826728407911,0.334231370655521,3.24066498222321,4.2091439970888,2.97884250141517,2.43373507478783,2.08094956095805,0,0,0.579606171470105,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,3.44898444241729,1.71813722741315,2.02415753615602,1.59282707162048,1.95325036156926,0,1.05402583354441,0.639933055772092,3.74792179657038,1.89421801635213,1.64225599384209,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0,0,0.648473311192717,1.08006287447623,0,1.28188885352968,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,3.61666214967846,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.353830258013357,1.83309043480088,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,2.42472541221049,0,1.12990370390266,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51354161145029,4.12488763221031,8.61447629492177,0.199679000498991,2.57535628881943,4.01708623395371,1.20930250476107,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,2.1440859791201,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9846640872478,4.14984426985683,0,0,0.544017803369474,4.0110383043632,1.53172788381731,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7013 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=197bp_to_AB527749,CU686836,EU446636_5end | |||
|coexpression_cluster_id=C3636 | |||
|description=CAGE_peak_2_at_MEOX1_5end | |||
|id=chr17:41738684..41738704,- | |||
|ontology_enrichment_celltype=CL:0000791!1.85e-20!18;CL:0000789!1.85e-20!18;CL:0002420!1.85e-20!18;CL:0002419!1.85e-20!18;CL:0000790!1.85e-20!18;CL:0000084!2.11e-15!25;CL:0000827!2.11e-15!25;CL:0000625!3.08e-13!11;CL:0000838!3.45e-11!52;CL:0000542!7.44e-11!53;CL:0000051!7.44e-11!53;CL:0000624!1.80e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.08e-15;18!CL:0000789;7.08e-15;18!CL:0002419;7.08e-15;18!CL:0000084;2.73e-12;25!CL:0000625;3.41e-09;11!CL:0000624;1.63e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.63e-15,18;CL:0000789,4.63e-15,18;CL:0002420,4.63e-15,18;CL:0002419,4.63e-15,18;CL:0000790,4.63e-15,18;CL:0000084,1.96e-12,25;CL:0000827,1.96e-12,25;CL:0000625,2.31e-09,11;CL:0000624,1.57e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;7.08e-15;18!UBERON:0005062;3.15e-08;4!UBERON:0007284;3.15e-08;4!UBERON:0004872;2.18e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.32e-24!115;UBERON:0003978!8.69e-07!3;UBERON:0009751!8.69e-07!3;UBERON:0000946!8.69e-07!3;UBERON:0002523!8.69e-07!3;UBERON:0005983!8.69e-07!3;UBERON:0002165!8.69e-07!3;UBERON:0002062!8.69e-07!3;UBERON:0007280!8.69e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.36e-11;3!UBERON:0000946;7.36e-11;3!UBERON:0002081;9.53e-08;2!UBERON:0002133;9.53e-08;2!UBERON:0003127;3.24e-07;2!UBERON:0005090;9.01e-07;2!UBERON:0001829;9.01e-07;2!UBERON:0001630;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.52e-22,114;UBERON:0003978,7.79e-11,3;UBERON:0009751,7.79e-11,3;UBERON:0000946,7.79e-11,3;UBERON:0002523,7.79e-11,3;UBERON:0005983,7.79e-11,3;UBERON:0002165,7.79e-11,3;UBERON:0002062,7.79e-11,3;UBERON:0007280,7.79e-11,3;UBERON:0002133,9.58e-08,2;UBERON:0002081,1.06e-07,2;UBERON:0010227,1.06e-07,2;UBERON:0003127,2.50e-07,2;UBERON:0005090,9.05e-07,2;UBERON:0001630,9.05e-07,2;UBERON:0001829,9.61e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,1.17903228824749,1.85041349099558,0.334372990781356,0.977766799900771,0,1.94826728407911,0.334231370655521,3.24066498222321,4.2091439970888,2.97884250141517,2.43373507478783,2.08094956095805,0,0,0.579606171470105,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,3.44898444241729,1.71813722741315,2.02415753615602,1.59282707162048,1.95325036156926,0,1.05402583354441,0.639933055772092,3.74792179657038,1.89421801635213,1.64225599384209,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0,0,0.648473311192717,1.08006287447623,0,1.28188885352968,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39524537815682,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0.398495976502139,1.93398740871803,0,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,3.61666214967846,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.353830258013357,1.83309043480088,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,2.42472541221049,0,1.12990370390266,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51354161145029,4.12488763221031,8.61447629492177,0.199679000498991,2.57535628881943,4.01708623395371,1.20930250476107,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,2.1440859791201,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9846640872478,4.14984426985683,0,0,0.544017803369474,4.0110383043632,1.53172788381731,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,0,0,0,0,0,1.09651553371436,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72684804271131,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.348724276104376,0,0,0,0,0,1.29068207646083,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,1.84793052341245,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0,0,0,0,1.69171052363736,3.15843651070528,0,0,0,0,0,1.83491713361816,0,0.315543124386369,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0,1.70587185520785,0.23806443146374,0.0645889098360061,0.744896571550295,0,0.509177266225319,0.202117188958219,3.9189014621453,0.342233301085281,1.01028079521881,1.79305513481691,3.32660356546013,0,0,0,0,0,4.52293343476606,1.22068853494722,5.3260541934841,5.03184483977566,0 | |||
|short_description=p2@MEOX1 | |||
}} |
Revision as of 13:49, 11 September 2013
Short description: | p2@MEOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MEOX1_5end |
Coexpression cluster: | C3636_CD4_heart_vagina_vein_lymphangiectasia_adipose_breast |
Association with transcript: | 197bp_to_AB527749, CU686836, EU446636_5end |
EntrezGene: | MEOX1 |
HGNC: | 7013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.63e-15 | 18 |
alpha-beta T cell | 4.63e-15 | 18 |
immature T cell | 4.63e-15 | 18 |
mature T cell | 4.63e-15 | 18 |
immature alpha-beta T cell | 4.63e-15 | 18 |
T cell | 1.96e-12 | 25 |
pro-T cell | 1.96e-12 | 25 |
CD8-positive, alpha-beta T cell | 2.31e-09 | 11 |
CD4-positive, alpha-beta T cell | 1.57e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.52e-22 | 114 |
valve | 7.79e-11 | 3 |
cardiac mesenchyme | 7.79e-11 | 3 |
cardial valve | 7.79e-11 | 3 |
tunica intima | 7.79e-11 | 3 |
heart layer | 7.79e-11 | 3 |
endocardium | 7.79e-11 | 3 |
endocardial cushion | 7.79e-11 | 3 |
presumptive endocardium | 7.79e-11 | 3 |
atrioventricular valve | 9.58e-08 | 2 |
cardiac atrium | 1.06e-07 | 2 |
future cardiac atrium | 1.06e-07 | 2 |
open tracheal system trachea | 2.50e-07 | 2 |
muscle structure | 9.05e-07 | 2 |
muscle organ | 9.05e-07 | 2 |
major salivary gland | 9.61e-07 | 2 |
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