FFCP PHASE1:Hg19::chr17:40427641..40427655,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C93|description=CAGE_peak_at_chr17:40427641..40427655,-|id=chr17:40427641..40427655,-|ontology_enrichment_celltype=CL:0000080!5.05e-12!6;CL:0000988!2.20e-10!182;CL:0000623!2.06e-09!3;CL:0000825!2.06e-09!3;CL:0000081!6.29e-09!11;CL:0000767!6.34e-09!3;CL:0000037!7.59e-09!172;CL:0000566!7.59e-09!172;CL:0000094!9.27e-09!8;CL:0002150!2.33e-08!3;CL:0000861!2.33e-08!3;CL:0002032!4.79e-08!165;CL:0000837!4.79e-08!165;CL:0000624!5.71e-08!6;CL:0000084!1.32e-07!25;CL:0000827!1.32e-07!25;CL:0000838!3.19e-07!52;CL:0000542!5.00e-07!53;CL:0000051!5.00e-07!53;CL:0000791!5.16e-07!18;CL:0000789!5.16e-07!18;CL:0002420!5.16e-07!18;CL:0002419!5.16e-07!18;CL:0000790!5.16e-07!18|ontology_enrichment_celltype_v019=CL:0000081;3.86e-13;11!CL:0000771;6.17e-09;2!CL:0000094;1.65e-08;8!CL:0000791;3.79e-08;18!CL:0000789;3.79e-08;18!CL:0002419;3.79e-08;18|ontology_enrichment_celltype_v019_2=CL:0000988,2.02e-13,177;CL:0000081,4.11e-13,11;CL:0000771,6.42e-09,2;CL:0000094,1.71e-08,8;CL:0002032,1.85e-08,161;CL:0000837,1.85e-08,161;CL:0000791,3.84e-08,18;CL:0000789,3.84e-08,18;CL:0002420,3.84e-08,18;CL:0002419,3.84e-08,18;CL:0000790,3.84e-08,18;CL:0000037,4.58e-08,168|ontology_enrichment_development_v019=CL:0000790;3.79e-08;18|ontology_enrichment_disease=DOID:1036!3.07e-13!8|ontology_enrichment_disease_v019=DOID:1036;7.52e-48;8!DOID:8692;7.32e-13;31!DOID:1240;4.58e-09;39|ontology_enrichment_disease_v019_2=DOID:1036,6.50e-48,8;DOID:8692,1.83e-12,31;DOID:1240,6.57e-10,39;DOID:2531,1.44e-07,51;DOID:0060083,1.44e-07,51|ontology_enrichment_uberon=UBERON:0000178!2.19e-08!15;UBERON:0000179!2.19e-08!15;UBERON:0000463!2.19e-08!15|ontology_enrichment_uberon_v019=UBERON:0002331;1.41e-14;10!UBERON:0000178;6.39e-10;15!UBERON:0000179;6.39e-10;15!UBERON:0000463;6.39e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.41e-14,10;UBERON:0000358,1.41e-14,10;UBERON:0000307,1.41e-14,10;UBERON:0000091,1.41e-14,10;UBERON:0000087,1.41e-14,10;UBERON:0007010,1.41e-14,10;UBERON:0007806,1.41e-14,10;UBERON:0008780,1.41e-14,10;UBERON:0005728,1.41e-14,10;UBERON:0000178,6.39e-10,15;UBERON:0000179,6.39e-10,15;UBERON:0000463,6.39e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.786839080455332,2.75107533924415,0.616804496998528,0,0.32592226663359,0,0,0,0,0.443067789167242,0.812411591295047,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0,0,0,0,0,1.20964045934839,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.77005821767849,0,0,0,0,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.332423363800313,4.96310453357798,4.70550082362575,8.39107934879214,5.31310451627718,0.476809736941136,0,0,0,0,0,0,0,8.00607047437679,3.83048210734159,5.95205112181096,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.292357268344742,0.246346371159628,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr17:40427641..40427655,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_at_chr17:40427641..40427655,- | |||
|id=chr17:40427641..40427655,- | |||
|ontology_enrichment_celltype=CL:0000080!5.05e-12!6;CL:0000988!2.20e-10!182;CL:0000623!2.06e-09!3;CL:0000825!2.06e-09!3;CL:0000081!6.29e-09!11;CL:0000767!6.34e-09!3;CL:0000037!7.59e-09!172;CL:0000566!7.59e-09!172;CL:0000094!9.27e-09!8;CL:0002150!2.33e-08!3;CL:0000861!2.33e-08!3;CL:0002032!4.79e-08!165;CL:0000837!4.79e-08!165;CL:0000624!5.71e-08!6;CL:0000084!1.32e-07!25;CL:0000827!1.32e-07!25;CL:0000838!3.19e-07!52;CL:0000542!5.00e-07!53;CL:0000051!5.00e-07!53;CL:0000791!5.16e-07!18;CL:0000789!5.16e-07!18;CL:0002420!5.16e-07!18;CL:0002419!5.16e-07!18;CL:0000790!5.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000081;3.86e-13;11!CL:0000771;6.17e-09;2!CL:0000094;1.65e-08;8!CL:0000791;3.79e-08;18!CL:0000789;3.79e-08;18!CL:0002419;3.79e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.02e-13,177;CL:0000081,4.11e-13,11;CL:0000771,6.42e-09,2;CL:0000094,1.71e-08,8;CL:0002032,1.85e-08,161;CL:0000837,1.85e-08,161;CL:0000791,3.84e-08,18;CL:0000789,3.84e-08,18;CL:0002420,3.84e-08,18;CL:0002419,3.84e-08,18;CL:0000790,3.84e-08,18;CL:0000037,4.58e-08,168 | |||
|ontology_enrichment_development_v019=CL:0000790;3.79e-08;18 | |||
|ontology_enrichment_disease=DOID:1036!3.07e-13!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.52e-48;8!DOID:8692;7.32e-13;31!DOID:1240;4.58e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.50e-48,8;DOID:8692,1.83e-12,31;DOID:1240,6.57e-10,39;DOID:2531,1.44e-07,51;DOID:0060083,1.44e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.19e-08!15;UBERON:0000179!2.19e-08!15;UBERON:0000463!2.19e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.41e-14;10!UBERON:0000178;6.39e-10;15!UBERON:0000179;6.39e-10;15!UBERON:0000463;6.39e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.41e-14,10;UBERON:0000358,1.41e-14,10;UBERON:0000307,1.41e-14,10;UBERON:0000091,1.41e-14,10;UBERON:0000087,1.41e-14,10;UBERON:0007010,1.41e-14,10;UBERON:0007806,1.41e-14,10;UBERON:0008780,1.41e-14,10;UBERON:0005728,1.41e-14,10;UBERON:0000178,6.39e-10,15;UBERON:0000179,6.39e-10,15;UBERON:0000463,6.39e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.786839080455332,2.75107533924415,0.616804496998528,0,0.32592226663359,0,0,0,0,0.443067789167242,0.812411591295047,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0,0,0,0,0,1.20964045934839,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.77005821767849,0,0,0,0,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.332423363800313,4.96310453357798,4.70550082362575,8.39107934879214,5.31310451627718,0.476809736941136,0,0,0,0,0,0,0,8.00607047437679,3.83048210734159,5.95205112181096,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.292357268344742,0.246346371159628,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:40427641..40427655,- | |||
}} |
Revision as of 13:42, 11 September 2013
Short description: | p@chr17:40427641..40427655, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:40427641..40427655, - |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.02e-13 | 177 |
blood cell | 4.11e-13 | 11 |
eosinophil | 6.42e-09 | 2 |
granulocyte | 1.71e-08 | 8 |
hematopoietic oligopotent progenitor cell | 1.85e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-08 | 161 |
mature alpha-beta T cell | 3.84e-08 | 18 |
alpha-beta T cell | 3.84e-08 | 18 |
immature T cell | 3.84e-08 | 18 |
mature T cell | 3.84e-08 | 18 |
immature alpha-beta T cell | 3.84e-08 | 18 |
hematopoietic stem cell | 4.58e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.41e-14 | 10 |
blastocyst | 1.41e-14 | 10 |
blastula | 1.41e-14 | 10 |
bilaminar disc | 1.41e-14 | 10 |
inner cell mass | 1.41e-14 | 10 |
cleaving embryo | 1.41e-14 | 10 |
connecting stalk | 1.41e-14 | 10 |
inner cell mass derived epiblast | 1.41e-14 | 10 |
extraembryonic mesoderm | 1.41e-14 | 10 |
blood | 6.39e-10 | 15 |
haemolymphatic fluid | 6.39e-10 | 15 |
organism substance | 6.39e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.50e-48 | 8 |
myeloid leukemia | 1.83e-12 | 31 |
leukemia | 6.57e-10 | 39 |
hematologic cancer | 1.44e-07 | 51 |
immune system cancer | 1.44e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.