FFCP PHASE1:Hg19::chr17:38599535..38599558,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3487|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5473|TSSclassifier=W|UniProt=P22692|association_with_transcript=-117bp_to_NM_001552,uc002hus.2_5end|description=CAGE_peak_3_at_IGFBP4_5end|id=chr17:38599535..38599558,+|ontology_enrichment_celltype=CL:0000766!1.14e-07!76;CL:0000557!1.40e-07!71;CL:0002057!1.99e-07!42|ontology_enrichment_celltype_v019=CL:0000860;1.29e-12;33!CL:0002057;1.29e-12;33!CL:0000473;4.06e-11;39!CL:0000234;4.06e-11;39|ontology_enrichment_celltype_v019_2=CL:0000766,4.08e-12,72;CL:0000557,1.36e-11,67;CL:0000473,7.56e-10,48;CL:0000234,7.56e-10,48;CL:0002009,3.49e-09,61;CL:0000839,4.61e-09,66;CL:0000860,6.02e-09,42;CL:0002057,6.02e-09,42;CL:0000763,1.21e-08,108;CL:0000049,1.21e-08,108;CL:0002194,4.87e-08,59;CL:0000576,4.87e-08,59;CL:0000040,4.87e-08,59;CL:0000559,4.87e-08,59|ontology_enrichment_development_v019=CL:0002057;5.85e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.80e-08!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.45e-10,76;UBERON:0001474,4.25e-09,82;UBERON:0004765,7.11e-09,90;UBERON:0002405,3.78e-08,93;UBERON:0001434,4.71e-07,100|phase1_expression=1.09007027562334,1.2846031433459,1.26858963686374,1.0007329835313,1.34088328328186,1.74467704820074,0,1.89515962028049,1.30592814099919,0,0.697801167972428,0.436882744260345,0.263766978228454,0.247532705920093,0.662794751455832,3.36162573225888,1.80808358407193,0.730310090387373,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,2.75354993794233,1.53531759238885,4.02521920621798,0,0.30120591877825,0.739508020333575,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0.447830948479849,1.29557466407592,2.83333124397605,0.872389432677388,3.77875943688809,1.94067248950253,0.464858073811369,3.70051099219643,3.71647645074124,2.3015391385772,2.30544635876191,0.236482229888585,3.10271112662957,5.16387746867061,10.8341189275473,1.31769637679823,3.0019676506363,1.12361742222542,1.83650335422542,0.962787081228281,3.83602275479425,0.329851300186716,3.39088217956774,2.98357325372886,0.580418477257168,2.26954089876456,1.86846674698672,1.7587406567972,6.77927793946262,0.65156653411535,6.05399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.48217676009124,0.285012743741249,0,0.547992461293902,0,1.09227722252426,0.889509253863555,2.98711155796555,2.00197993518006,0.574752439954483,0,0,1.70763890732835,0.587237189370939,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0.977766799900771,0.473447805734733,1.94826728407911,0.334231370655521,0.883817722424512,0.221533894583621,1.08321545506006,0.768547918354051,0.520237390239513,0.493313713811028,0,0,0.14828656316206,1.60524496853828,4.18142095219907,0.566546713487831,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.947109008176067,0.821127996921047,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.895037932904712,0,0.50133791063589,1.15877215168659,0,0.486634870302636,0.189069634328136,0.443458794925128,0.614843499851882,0.261958150995425,0,0,0,0.348259474598534,0.531831842075461,0,2.85997455390064,1.85728750664782,0.79504962946682,0,2.08284300964557,0.56530794192401,0,1.10047216776027,0.835979866147242,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.267899184852239,0.673588117878509,0.450445921933289,4.5994991239765,0,0.366403487860815,3.9534125230819,3.87780264148325,0,0,0.379891534993739,1.72131935057184,0.286836620748814,0,0,2.1349799145941,1.48000529050296,0.622422070799533,0.538842688278752,0.163461903113459,0.454072282934794,1.15235184896,0,1.24864030732128,0,0.298897361103602,0.117434498643765,0,0,0,0.245668634623536,0.826606249406124,0,0.494533858557114,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.901428353439581,0.226864366320042,0,0.640672166455702,0.211931901159562,0,0,0.515281080091258,0.37223371266318,0.843881661206331,0,0,0.0920498986422993,0.484938170456436,0,0.201504196455281,0.67824236924195,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.207322110030741,1.26160425437814,0.36497735907583,0,1.92972281457866,1.38134921352481,0.464367928031979,0.721879481669586,0.828147600278907,1.68584690078102,1.44606617930089,0.772057809126758,1.52515610864684,1.18635309555548,0.943819157121151,1.76599318612811,2.69323009862473,0.738155454624648,0,0.8231480226628,0,0,0.982827216677626,1.77236972004421,0,0.122988438543114,2.40194934417936,0,1.1240175325762,0,0.185176890317059,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0.858486162094873,0.492434012174795,0.702012795417713,0.297262324577456,1.8746766797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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3487 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5473 | |||
|TSSclassifier=W | |||
|UniProt=P22692 | |||
|association_with_transcript=-117bp_to_NM_001552,uc002hus.2_5end | |||
|description=CAGE_peak_3_at_IGFBP4_5end | |||
|id=chr17:38599535..38599558,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.14e-07!76;CL:0000557!1.40e-07!71;CL:0002057!1.99e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-12;33!CL:0002057;1.29e-12;33!CL:0000473;4.06e-11;39!CL:0000234;4.06e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.08e-12,72;CL:0000557,1.36e-11,67;CL:0000473,7.56e-10,48;CL:0000234,7.56e-10,48;CL:0002009,3.49e-09,61;CL:0000839,4.61e-09,66;CL:0000860,6.02e-09,42;CL:0002057,6.02e-09,42;CL:0000763,1.21e-08,108;CL:0000049,1.21e-08,108;CL:0002194,4.87e-08,59;CL:0000576,4.87e-08,59;CL:0000040,4.87e-08,59;CL:0000559,4.87e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;5.85e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.80e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.45e-10,76;UBERON:0001474,4.25e-09,82;UBERON:0004765,7.11e-09,90;UBERON:0002405,3.78e-08,93;UBERON:0001434,4.71e-07,100 | |||
|phase1_expression=1.09007027562334,1.2846031433459,1.26858963686374,1.0007329835313,1.34088328328186,1.74467704820074,0,1.89515962028049,1.30592814099919,0,0.697801167972428,0.436882744260345,0.263766978228454,0.247532705920093,0.662794751455832,3.36162573225888,1.80808358407193,0.730310090387373,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,2.75354993794233,1.53531759238885,4.02521920621798,0,0.30120591877825,0.739508020333575,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0.447830948479849,1.29557466407592,2.83333124397605,0.872389432677388,3.77875943688809,1.94067248950253,0.464858073811369,3.70051099219643,3.71647645074124,2.3015391385772,2.30544635876191,0.236482229888585,3.10271112662957,5.16387746867061,10.8341189275473,1.31769637679823,3.0019676506363,1.12361742222542,1.83650335422542,0.962787081228281,3.83602275479425,0.329851300186716,3.39088217956774,2.98357325372886,0.580418477257168,2.26954089876456,1.86846674698672,1.7587406567972,6.77927793946262,0.65156653411535,6.05399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.48217676009124,0.285012743741249,0,0.547992461293902,0,1.09227722252426,0.889509253863555,2.98711155796555,2.00197993518006,0.574752439954483,0,0,1.70763890732835,0.587237189370939,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0.977766799900771,0.473447805734733,1.94826728407911,0.334231370655521,0.883817722424512,0.221533894583621,1.08321545506006,0.768547918354051,0.520237390239513,0.493313713811028,0,0,0.14828656316206,1.60524496853828,4.18142095219907,0.566546713487831,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.947109008176067,0.821127996921047,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.895037932904712,0,0.50133791063589,1.15877215168659,0,0.486634870302636,0.189069634328136,0.443458794925128,0.614843499851882,0.261958150995425,0,0,0,0.348259474598534,0.531831842075461,0,2.85997455390064,1.85728750664782,0.79504962946682,0,2.08284300964557,0.56530794192401,0,1.10047216776027,0.835979866147242,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.267899184852239,0.673588117878509,0.450445921933289,4.5994991239765,0,0.366403487860815,3.9534125230819,3.87780264148325,0,0,0.379891534993739,1.72131935057184,0.286836620748814,0,0,2.1349799145941,1.48000529050296,0.622422070799533,0.538842688278752,0.163461903113459,0.454072282934794,1.15235184896,0,1.24864030732128,0,0.298897361103602,0.117434498643765,0,0,0,0.245668634623536,0.826606249406124,0,0.494533858557114,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.901428353439581,0.226864366320042,0,0.640672166455702,0.211931901159562,0,0,0.515281080091258,0.37223371266318,0.843881661206331,0,0,0.0920498986422993,0.484938170456436,0,0.201504196455281,0.67824236924195,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.207322110030741,1.26160425437814,0.36497735907583,0,1.92972281457866,1.38134921352481,0.464367928031979,0.721879481669586,0.828147600278907,1.68584690078102,1.44606617930089,0.772057809126758,1.52515610864684,1.18635309555548,0.943819157121151,1.76599318612811,2.69323009862473,0.738155454624648,0,0.8231480226628,0,0,0.982827216677626,1.77236972004421,0,0.122988438543114,2.40194934417936,0,1.1240175325762,0,0.185176890317059,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0.858486162094873,0.492434012174795,0.702012795417713,0.297262324577456,1.87467667973554,0.503946384596579,0.141775097242386,0,0.290633938513962,0.766765358330422,0.492663237895943,0.528290604079356,6.63449969730471,4.32359860250884,5.6809095041871,0.126995788584338,1.14596527667483,3.51652341630141,5.13217338068116,0.411309970813294,0.300343057843917,1.42913216315289,0.224262168690721,0.43596006883328,0.5867062865676,0.129271715757778,7.15312891703765,10.143633030672,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.799266537048298,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.699810938274399,1.2162378064119,1.50677127429638,12.6500363689819,0.239624855491583,0,0,0,1.02738161275192,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.613457458595699,2.50085260529839,0.542530047399471,1.66376689224646,1.07057393278297,1.10391690523754,1.28855556491985,0.902838299183157,2.27407504055985,2.0694614258501,0,0.553107505625109,0.347534457872331,0.195801157462741,0,0,0,0.426910231213777,0,0,0.604780586659361,0.496215615637554,2.455391572609,1.12264037773229,0.384417447767103,0.511707249066704,1.12597744800525,0,0.154209693802656,0.887808626565635,0.0821271560138091,0,0.232420756919918,0,0,0.276242966807689,0.229628896329213,1.0925470080403,1.04899531967539,0.451199612907412,0.0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| |||
|short_description=p3@IGFBP4 | |||
}} |
Revision as of 13:26, 11 September 2013
Short description: | p3@IGFBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IGFBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_NM_001552, uc002hus.2_5end |
EntrezGene: | IGFBP4 |
HGNC: | 5473 |
UniProt: | P22692 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.08e-12 | 72 |
granulocyte monocyte progenitor cell | 1.36e-11 | 67 |
defensive cell | 7.56e-10 | 48 |
phagocyte | 7.56e-10 | 48 |
macrophage dendritic cell progenitor | 3.49e-09 | 61 |
myeloid lineage restricted progenitor cell | 4.61e-09 | 66 |
classical monocyte | 6.02e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.02e-09 | 42 |
myeloid cell | 1.21e-08 | 108 |
common myeloid progenitor | 1.21e-08 | 108 |
monopoietic cell | 4.87e-08 | 59 |
monocyte | 4.87e-08 | 59 |
monoblast | 4.87e-08 | 59 |
promonocyte | 4.87e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.45e-10 | 76 |
bone element | 4.25e-09 | 82 |
skeletal element | 7.11e-09 | 90 |
immune system | 3.78e-08 | 93 |
skeletal system | 4.71e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.