FFCP PHASE1:Hg19::chr17:37307837..37307915,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20945|TSSclassifier=S|UniProt=Q8IUK5|association_with_transcript=0bp_to_ENST00000315392,ENST00000394316,ENST00000394318,NM_020405,uc002hrg.2,uc002hrh.2,uc002hri.2_5end|description=CAGE_peak_1_at_PLXDC1_5end|id=chr17:37307837..37307915,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000625;8.41e-08;11!CL:0000791;1.71e-07;18!CL:0000789;1.71e-07;18!CL:0002419;1.71e-07;18|ontology_enrichment_celltype_v019_2=CL:0000625,7.03e-08,11;CL:0000791,1.62e-07,18;CL:0000789,1.62e-07,18;CL:0002420,1.62e-07,18;CL:0002419,1.62e-07,18;CL:0000790,1.62e-07,18|ontology_enrichment_development_v019=UBERON:0006601;3.64e-10;82!CL:0000790;1.71e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.05e-56!115;UBERON:0001017!6.22e-28!82;UBERON:0001049!8.25e-28!57;UBERON:0005068!8.25e-28!57;UBERON:0006241!8.25e-28!57;UBERON:0007135!8.25e-28!57;UBERON:0005743!1.10e-26!86;UBERON:0002616!2.06e-25!59;UBERON:0000955!9.76e-25!69;UBERON:0006238!9.76e-25!69;UBERON:0000073!1.83e-24!94;UBERON:0001016!1.83e-24!94;UBERON:0002346!1.90e-20!90;UBERON:0003080!4.32e-20!42;UBERON:0003075!8.69e-20!86;UBERON:0007284!8.69e-20!86;UBERON:0002780!1.29e-19!41;UBERON:0001890!1.29e-19!41;UBERON:0006240!1.29e-19!41;UBERON:0001893!1.44e-17!34;UBERON:0002020!2.27e-17!34;UBERON:0003528!2.27e-17!34;UBERON:0002791!7.72e-17!33;UBERON:0001869!2.38e-16!32;UBERON:0000153!5.95e-15!129;UBERON:0007811!5.95e-15!129;UBERON:0002619!1.04e-14!22;UBERON:0001950!5.87e-14!20;UBERON:0000924!1.89e-13!173;UBERON:0006601!1.89e-13!173;UBERON:0000033!4.80e-13!123;UBERON:0004121!8.11e-13!169;UBERON:0000956!8.19e-13!25;UBERON:0000203!8.19e-13!25;UBERON:0003056!1.17e-12!61;UBERON:0003076!7.16e-09!15;UBERON:0003057!7.16e-09!15;UBERON:0004733!2.87e-07!12;UBERON:0002028!2.87e-07!12;UBERON:0007277!2.87e-07!12|ontology_enrichment_uberon_v019=UBERON:0001950;4.09e-18;20!UBERON:0002619;8.70e-18;22!UBERON:0001893;1.08e-16;34!UBERON:0007023;2.62e-16;114!UBERON:0003528;2.63e-16;34!UBERON:0002020;2.63e-16;34!UBERON:0001869;3.44e-16;32!UBERON:0002791;4.26e-16;32!UBERON:0000073;8.80e-16;53!UBERON:0002616;8.80e-16;53!UBERON:0002780;1.85e-15;41!UBERON:0001890;1.85e-15;41!UBERON:0000956;7.89e-15;25!UBERON:0000203;7.89e-15;25!UBERON:0000955;1.71e-10;68!UBERON:0001017;2.05e-10;75!UBERON:0001016;4.93e-10;83!UBERON:0004733;3.42e-07;12!UBERON:0002028;3.42e-07;12!UBERON:0000200;6.31e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.03e-62,114;UBERON:0001049,3.17e-29,56;UBERON:0005068,3.17e-29,56;UBERON:0006241,3.17e-29,56;UBERON:0007135,3.17e-29,56;UBERON:0000073,5.06e-27,53;UBERON:0002616,5.06e-27,53;UBERON:0001017,2.10e-25,81;UBERON:0001016,4.43e-24,89;UBERON:0000955,3.60e-22,68;UBERON:0006238,3.60e-22,68;UBERON:0002346,7.76e-22,86;UBERON:0003075,1.38e-21,82;UBERON:0007284,1.38e-21,82;UBERON:0002780,4.09e-21,41;UBERON:0001890,4.09e-21,41;UBERON:0003080,4.09e-21,41;UBERON:0006240,4.09e-21,41;UBERON:0001893,4.84e-20,34;UBERON:0003528,8.57e-20,34;UBERON:0002020,8.57e-20,34;UBERON:0001869,1.92e-18,32;UBERON:0002791,2.96e-18,32;UBERON:0001950,3.32e-18,20;UBERON:0002619,7.22e-18,22;UBERON:0010371,1.25e-16,104;UBERON:0010314,1.59e-16,132;UBERON:0000956,6.72e-15,25;UBERON:0000203,6.72e-15,25;UBERON:0004121,7.03e-14,171;UBERON:0000924,7.03e-14,171;UBERON:0006601,7.03e-14,171;UBERON:0011216,3.02e-13,223;UBERON:0003056,1.29e-12,61;UBERON:0003076,3.08e-09,15;UBERON:0003057,3.08e-09,15;UBERON:0004733,3.82e-07,12;UBERON:0002028,3.82e-07,12;UBERON:0007277,3.82e-07,12;UBERON:0000200,6.49e-07,6|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,1.26343974685366,6.00726944859629,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,2.19418305034661,0,0,0.502170558379211,0,0,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,1.30206522429511,0.447830948479849,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,4.52432471261816,1.57204305099666,2.2616164889946,0,0,1.89379122293893,5.84480185223734,0,0,0,0,0,0,0,0,0,10.3800594213442,11.5042556078577,17.7710390468461,0,1.14966148080576,2.06176467289578,1.51811815211702,3.18565414324097,3.25541726928209,4.75226022224187,2.40920190524436,2.68771883424279,1.24930726552346,2.36777252044017,1.64225599384209,4.03213486449465,1.87208137048455,9.99288386791313,0,0,0,0,0,0.869079113764942,15.905718941022,2.43317435151318,0,0.221729397462564,0,11.2642004928033,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8672662123986,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,1.31693286264251,0,0.901428353439581,0,0.358779271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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |||
|TSSclassifier=S | |||
|UniProt=Q8IUK5 | |||
|association_with_transcript=0bp_to_ENST00000315392,ENST00000394316,ENST00000394318,NM_020405,uc002hrg.2,uc002hrh.2,uc002hri.2_5end | |||
|description=CAGE_peak_1_at_PLXDC1_5end | |||
|id=chr17:37307837..37307915,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.41e-08;11!CL:0000791;1.71e-07;18!CL:0000789;1.71e-07;18!CL:0002419;1.71e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.03e-08,11;CL:0000791,1.62e-07,18;CL:0000789,1.62e-07,18;CL:0002420,1.62e-07,18;CL:0002419,1.62e-07,18;CL:0000790,1.62e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.64e-10;82!CL:0000790;1.71e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-56!115;UBERON:0001017!6.22e-28!82;UBERON:0001049!8.25e-28!57;UBERON:0005068!8.25e-28!57;UBERON:0006241!8.25e-28!57;UBERON:0007135!8.25e-28!57;UBERON:0005743!1.10e-26!86;UBERON:0002616!2.06e-25!59;UBERON:0000955!9.76e-25!69;UBERON:0006238!9.76e-25!69;UBERON:0000073!1.83e-24!94;UBERON:0001016!1.83e-24!94;UBERON:0002346!1.90e-20!90;UBERON:0003080!4.32e-20!42;UBERON:0003075!8.69e-20!86;UBERON:0007284!8.69e-20!86;UBERON:0002780!1.29e-19!41;UBERON:0001890!1.29e-19!41;UBERON:0006240!1.29e-19!41;UBERON:0001893!1.44e-17!34;UBERON:0002020!2.27e-17!34;UBERON:0003528!2.27e-17!34;UBERON:0002791!7.72e-17!33;UBERON:0001869!2.38e-16!32;UBERON:0000153!5.95e-15!129;UBERON:0007811!5.95e-15!129;UBERON:0002619!1.04e-14!22;UBERON:0001950!5.87e-14!20;UBERON:0000924!1.89e-13!173;UBERON:0006601!1.89e-13!173;UBERON:0000033!4.80e-13!123;UBERON:0004121!8.11e-13!169;UBERON:0000956!8.19e-13!25;UBERON:0000203!8.19e-13!25;UBERON:0003056!1.17e-12!61;UBERON:0003076!7.16e-09!15;UBERON:0003057!7.16e-09!15;UBERON:0004733!2.87e-07!12;UBERON:0002028!2.87e-07!12;UBERON:0007277!2.87e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.09e-18;20!UBERON:0002619;8.70e-18;22!UBERON:0001893;1.08e-16;34!UBERON:0007023;2.62e-16;114!UBERON:0003528;2.63e-16;34!UBERON:0002020;2.63e-16;34!UBERON:0001869;3.44e-16;32!UBERON:0002791;4.26e-16;32!UBERON:0000073;8.80e-16;53!UBERON:0002616;8.80e-16;53!UBERON:0002780;1.85e-15;41!UBERON:0001890;1.85e-15;41!UBERON:0000956;7.89e-15;25!UBERON:0000203;7.89e-15;25!UBERON:0000955;1.71e-10;68!UBERON:0001017;2.05e-10;75!UBERON:0001016;4.93e-10;83!UBERON:0004733;3.42e-07;12!UBERON:0002028;3.42e-07;12!UBERON:0000200;6.31e-07;6 | |||
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| |||
|short_description=p1@PLXDC1 | |||
}} |
Revision as of 13:15, 11 September 2013
Short description: | p1@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000315392, ENST00000394316, ENST00000394318, NM_020405, uc002hrg.2, uc002hrh.2, uc002hri.2_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | Q8IUK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.03e-08 | 11 |
mature alpha-beta T cell | 1.62e-07 | 18 |
alpha-beta T cell | 1.62e-07 | 18 |
immature T cell | 1.62e-07 | 18 |
mature T cell | 1.62e-07 | 18 |
immature alpha-beta T cell | 1.62e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.