FFCP PHASE1:Hg19::chr17:33759580..33759595,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55106|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25500|TSSclassifier=S|UniProt=Q8IYM2|association_with_transcript=-37bp_to_ENST00000304905,NM_018042,uc002hji.3_5end|description=CAGE_peak_4_at_SLFN12_5end|id=chr17:33759580..33759595,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002138;5.66e-09;6!CL:0000511;6.16e-07;1!CL:0002625;6.16e-07;1!CL:0000216;6.16e-07;1|ontology_enrichment_celltype_v019_2=CL:0005020,9.97e-09,6;CL:0002138,9.97e-09,6;CL:0005022,9.97e-09,6;CL:0000511,3.17e-07,1;CL:0002625,3.17e-07,1;CL:0000216,3.17e-07,1|ontology_enrichment_development_v019=CL:0005022;5.66e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0006834;6.16e-07;1!UBERON:0001136;6.16e-07;1!UBERON:0001343;6.16e-07;1!UBERON:0002171;6.16e-07;1!UBERON:0006518;6.16e-07;1!UBERON:0008949;6.16e-07;1!UBERON:0004910;6.16e-07;1!UBERON:0000101;6.16e-07;1!UBERON:0004813;6.16e-07;1!UBERON:0002167;6.16e-07;1!UBERON:0001473;7.76e-07;8!UBERON:0004536;7.76e-07;8!UBERON:0006558;7.76e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.99e-07,1;UBERON:0006518,2.99e-07,1;UBERON:0008949,2.99e-07,1;UBERON:0000101,2.99e-07,1;UBERON:0002167,2.99e-07,1;UBERON:0001136,3.17e-07,1;UBERON:0001343,3.17e-07,1;UBERON:0004910,3.17e-07,1;UBERON:0005154,3.17e-07,1;UBERON:0005295,3.17e-07,1;UBERON:0004813,3.17e-07,1;UBERON:0005297,3.17e-07,1;UBERON:0005294,3.17e-07,1;UBERON:0010141,3.17e-07,1;UBERON:0005891,3.17e-07,1;UBERON:0006834,4.51e-07,1|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0.125542639594803,0.534893840235659,0.410502947249729,0.472264687882075,0,0,0.309632246632152,0.919421224478927,0,0,0,0,0.587200878669695,0.553995408531877,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0.918251677112708,0,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0,0.75374599577023,0,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0.425208599930087,0,0.22465726229299,0,0,0.285012743741249,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,0.889509253863555,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0,0.328875809207352,0,0,0.296573126324121,0.267540828089713,0,0.226618685395132,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,0,0,1.50575119077773,1.15187950038977,0,1.18388626022008,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0.378139268656271,0.443458794925128,0.175669571386252,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0.417989933073621,0,1.06729878806013,1.33888245105868,0.402829317109147,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0.379891534993739,0.926864265692532,0.860509862246441,0,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0,0.772921620136887,0.18611685633159,0.337552664482532,0.389748020644795,1.00973509697646,0.460249493211497,0.484938170456436,0,0.10075209822764,0.169560592310488,0.773043412653187,0.545492241181669,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0.721832238805369,0.462985512576611,1.14152491340759,0,0,0,0,0.148631162288728,0,0.503946384596579,0.567100388969546,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0.336393253036082,0.87192013766656,0.2933531432838,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0.197030760201927,0,0.385029108839245,0,1.30139853857622,0,0,0,0,0,0.414415513436035,0.24538298343828,0,0,0,0.356857977594324,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0,0,0.306923946576125,0,0.512556597022804,0,0.321707842287215,0,0.462629081407967,0,0.574890092096664,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0.07701533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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55106 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25500 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYM2 | |||
|association_with_transcript=-37bp_to_ENST00000304905,NM_018042,uc002hji.3_5end | |||
|description=CAGE_peak_4_at_SLFN12_5end | |||
|id=chr17:33759580..33759595,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;5.66e-09;6!CL:0000511;6.16e-07;1!CL:0002625;6.16e-07;1!CL:0000216;6.16e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,9.97e-09,6;CL:0002138,9.97e-09,6;CL:0005022,9.97e-09,6;CL:0000511,3.17e-07,1;CL:0002625,3.17e-07,1;CL:0000216,3.17e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;5.66e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;6.16e-07;1!UBERON:0001136;6.16e-07;1!UBERON:0001343;6.16e-07;1!UBERON:0002171;6.16e-07;1!UBERON:0006518;6.16e-07;1!UBERON:0008949;6.16e-07;1!UBERON:0004910;6.16e-07;1!UBERON:0000101;6.16e-07;1!UBERON:0004813;6.16e-07;1!UBERON:0002167;6.16e-07;1!UBERON:0001473;7.76e-07;8!UBERON:0004536;7.76e-07;8!UBERON:0006558;7.76e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.99e-07,1;UBERON:0006518,2.99e-07,1;UBERON:0008949,2.99e-07,1;UBERON:0000101,2.99e-07,1;UBERON:0002167,2.99e-07,1;UBERON:0001136,3.17e-07,1;UBERON:0001343,3.17e-07,1;UBERON:0004910,3.17e-07,1;UBERON:0005154,3.17e-07,1;UBERON:0005295,3.17e-07,1;UBERON:0004813,3.17e-07,1;UBERON:0005297,3.17e-07,1;UBERON:0005294,3.17e-07,1;UBERON:0010141,3.17e-07,1;UBERON:0005891,3.17e-07,1;UBERON:0006834,4.51e-07,1 | |||
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| |||
|short_description=p4@SLFN12 | |||
}} |
Revision as of 13:04, 11 September 2013
Short description: | p4@SLFN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLFN12_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENST00000304905, NM_018042, uc002hji.3_5end |
EntrezGene: | SLFN12 |
HGNC: | 25500 |
UniProt: | Q8IYM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.97e-09 | 6 |
endothelial cell of lymphatic vessel | 9.97e-09 | 6 |
vascular lymphangioblast | 9.97e-09 | 6 |
androgen binding protein secreting cell | 3.17e-07 | 1 |
seminiferous tubule epithelial cell | 3.17e-07 | 1 |
Sertoli cell | 3.17e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.99e-07 | 1 |
right lung lobe | 2.99e-07 | 1 |
lower lobe of lung | 2.99e-07 | 1 |
lobe of lung | 2.99e-07 | 1 |
right lung | 2.99e-07 | 1 |
mesothelium | 3.17e-07 | 1 |
seminiferous tubule of testis | 3.17e-07 | 1 |
epithelium of male gonad | 3.17e-07 | 1 |
epithelial cord | 3.17e-07 | 1 |
sex cord | 3.17e-07 | 1 |
seminiferous tubule epithelium | 3.17e-07 | 1 |
testis sex cord | 3.17e-07 | 1 |
genital ridge | 3.17e-07 | 1 |
primitive sex cord of indifferent gonad | 3.17e-07 | 1 |
coelomic epithelium | 3.17e-07 | 1 |
uterus or analog | 4.51e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.