FFCP PHASE1:Hg19::chr17:29248750..29248768,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55803|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16487|TSSclassifier=S|UniProt=Q9NPF8|association_with_transcript=0bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end|description=CAGE_peak_4_at_ADAP2_5end|id=chr17:29248750..29248768,+|ontology_enrichment_celltype=CL:0002194!4.63e-53!63;CL:0000576!4.63e-53!63;CL:0000040!4.63e-53!63;CL:0000559!4.63e-53!63;CL:0002009!7.12e-51!65;CL:0002057!1.12e-49!42;CL:0000766!9.30e-49!76;CL:0000839!5.88e-46!70;CL:0000860!2.27e-45!45;CL:0000557!4.67e-45!71;CL:0000738!6.14e-40!140;CL:0002087!8.39e-37!119;CL:0000763!8.64e-34!112;CL:0000049!8.64e-34!112;CL:0002031!1.61e-30!124;CL:0000037!3.55e-30!172;CL:0000566!3.55e-30!172;CL:0000988!3.30e-27!182;CL:0002032!6.96e-27!165;CL:0000837!6.96e-27!165;CL:0002393!3.32e-11!9;CL:0002397!3.32e-11!9;CL:0000451!1.21e-09!10;CL:0000990!1.61e-07!8|ontology_enrichment_celltype_v019=CL:0000576;3.37e-38;48!CL:0000473;5.82e-31;39!CL:0000234;5.82e-31;39!CL:0000860;1.10e-26;33!CL:0002057;1.10e-26;33!CL:0000766;6.26e-25;69!CL:0000875;4.20e-16;3!CL:0002396;4.20e-16;3!CL:0002393;1.26e-13;6!CL:0002397;1.26e-13;6!CL:0000763;1.28e-13;100!CL:0000235;2.78e-13;6!CL:0000738;1.41e-10;136!CL:0002087;2.74e-10;104!CL:0002619;9.69e-08;3!CL:0000451;5.27e-07;10|ontology_enrichment_celltype_v019_2=CL:0002194,1.54e-66,59;CL:0000576,1.54e-66,59;CL:0000040,1.54e-66,59;CL:0000559,1.54e-66,59;CL:0002009,3.51e-64,61;CL:0000473,1.84e-62,48;CL:0000234,1.84e-62,48;CL:0000839,6.69e-59,66;CL:0000557,6.14e-58,67;CL:0000766,2.54e-57,72;CL:0000860,7.14e-51,42;CL:0002057,7.14e-51,42;CL:0002087,8.03e-39,115;CL:0000763,8.98e-39,108;CL:0000049,8.98e-39,108;CL:0000738,1.24e-38,136;CL:0002031,6.30e-37,120;CL:0000037,6.28e-30,168;CL:0002032,1.43e-29,161;CL:0000837,1.43e-29,161;CL:0000988,4.83e-28,177;CL:0002393,1.33e-26,9;CL:0002397,1.33e-26,9;CL:0000875,3.83e-16,3;CL:0002396,3.83e-16,3;CL:0000235,3.72e-13,6;CL:0000134,3.04e-11,354;CL:0002320,7.05e-11,361;CL:0000219,1.37e-09,386;CL:0000048,5.13e-08,427;CL:0002619,7.46e-08,3;CL:0000723,8.45e-08,433;CL:0000034,1.61e-07,441;CL:0000451,5.55e-07,10|ontology_enrichment_development_v019=CL:0002057;9.19e-36;42!CL:0000049;1.44e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.08e-43!102;UBERON:0003061!5.08e-43!102;UBERON:0002193!2.71e-40!112;UBERON:0002371!1.74e-39!80;UBERON:0001474!1.78e-35!86;UBERON:0002405!4.29e-33!115;UBERON:0004765!9.90e-29!101;UBERON:0001434!9.90e-29!101;UBERON:0007023!3.91e-22!115;UBERON:0003081!8.61e-14!216;UBERON:0002204!4.20e-12!167;UBERON:0001049!2.39e-08!57;UBERON:0005068!2.39e-08!57;UBERON:0006241!2.39e-08!57;UBERON:0007135!2.39e-08!57;UBERON:0000062!7.34e-07!511;UBERON:0002298!8.45e-07!8|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.14e-50,76;UBERON:0001474,2.82e-46,82;UBERON:0004765,1.26e-41,90;UBERON:0002390,1.79e-40,98;UBERON:0003061,1.79e-40,98;UBERON:0002405,4.36e-40,93;UBERON:0001434,7.52e-37,100;UBERON:0002193,3.86e-36,108;UBERON:0002204,1.65e-19,167;UBERON:0003081,3.74e-16,203;UBERON:0002384,2.22e-10,371;UBERON:0000926,6.72e-09,315;UBERON:0004120,6.72e-09,315;UBERON:0006603,6.72e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.619264493264304,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,2.91090116511902,0.971680998056939,2.83333124397605,2.18097358169347,0.755751887377619,1.4555043671269,0.232429036905685,0.411167888021826,0.929119112685311,1.43846196161075,0.768482119587302,0.236482229888585,2.06847408441971,0.645484683583826,1.35426486594342,0.941211697713023,0.272906150057846,0.674170453335254,0.612167784741805,0.962787081228281,1.91801137739712,0.989553900560148,1.19678194572979,0.852449501065388,0.580418477257168,0,1.86846674698672,0.75374599577023,1.5644487552606,1.08594422352558,1.21079900526674,1.10483290796269,0.316462387440884,2.74631872205524,2.33864729961548,3.35453832813401,1.23561494261145,1.20141514273205,1.44653028027372,4.84521664360123,2.38700012638908,2.73996230646951,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0.569212969109448,4.69789751496751,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,1.39303789839414,1.32957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,0.702012795417713,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16487 | |||
|TSSclassifier=S | |||
|UniProt=Q9NPF8 | |||
|association_with_transcript=0bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end | |||
|description=CAGE_peak_4_at_ADAP2_5end | |||
|id=chr17:29248750..29248768,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.63e-53!63;CL:0000576!4.63e-53!63;CL:0000040!4.63e-53!63;CL:0000559!4.63e-53!63;CL:0002009!7.12e-51!65;CL:0002057!1.12e-49!42;CL:0000766!9.30e-49!76;CL:0000839!5.88e-46!70;CL:0000860!2.27e-45!45;CL:0000557!4.67e-45!71;CL:0000738!6.14e-40!140;CL:0002087!8.39e-37!119;CL:0000763!8.64e-34!112;CL:0000049!8.64e-34!112;CL:0002031!1.61e-30!124;CL:0000037!3.55e-30!172;CL:0000566!3.55e-30!172;CL:0000988!3.30e-27!182;CL:0002032!6.96e-27!165;CL:0000837!6.96e-27!165;CL:0002393!3.32e-11!9;CL:0002397!3.32e-11!9;CL:0000451!1.21e-09!10;CL:0000990!1.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.37e-38;48!CL:0000473;5.82e-31;39!CL:0000234;5.82e-31;39!CL:0000860;1.10e-26;33!CL:0002057;1.10e-26;33!CL:0000766;6.26e-25;69!CL:0000875;4.20e-16;3!CL:0002396;4.20e-16;3!CL:0002393;1.26e-13;6!CL:0002397;1.26e-13;6!CL:0000763;1.28e-13;100!CL:0000235;2.78e-13;6!CL:0000738;1.41e-10;136!CL:0002087;2.74e-10;104!CL:0002619;9.69e-08;3!CL:0000451;5.27e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.54e-66,59;CL:0000576,1.54e-66,59;CL:0000040,1.54e-66,59;CL:0000559,1.54e-66,59;CL:0002009,3.51e-64,61;CL:0000473,1.84e-62,48;CL:0000234,1.84e-62,48;CL:0000839,6.69e-59,66;CL:0000557,6.14e-58,67;CL:0000766,2.54e-57,72;CL:0000860,7.14e-51,42;CL:0002057,7.14e-51,42;CL:0002087,8.03e-39,115;CL:0000763,8.98e-39,108;CL:0000049,8.98e-39,108;CL:0000738,1.24e-38,136;CL:0002031,6.30e-37,120;CL:0000037,6.28e-30,168;CL:0002032,1.43e-29,161;CL:0000837,1.43e-29,161;CL:0000988,4.83e-28,177;CL:0002393,1.33e-26,9;CL:0002397,1.33e-26,9;CL:0000875,3.83e-16,3;CL:0002396,3.83e-16,3;CL:0000235,3.72e-13,6;CL:0000134,3.04e-11,354;CL:0002320,7.05e-11,361;CL:0000219,1.37e-09,386;CL:0000048,5.13e-08,427;CL:0002619,7.46e-08,3;CL:0000723,8.45e-08,433;CL:0000034,1.61e-07,441;CL:0000451,5.55e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;9.19e-36;42!CL:0000049;1.44e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.08e-43!102;UBERON:0003061!5.08e-43!102;UBERON:0002193!2.71e-40!112;UBERON:0002371!1.74e-39!80;UBERON:0001474!1.78e-35!86;UBERON:0002405!4.29e-33!115;UBERON:0004765!9.90e-29!101;UBERON:0001434!9.90e-29!101;UBERON:0007023!3.91e-22!115;UBERON:0003081!8.61e-14!216;UBERON:0002204!4.20e-12!167;UBERON:0001049!2.39e-08!57;UBERON:0005068!2.39e-08!57;UBERON:0006241!2.39e-08!57;UBERON:0007135!2.39e-08!57;UBERON:0000062!7.34e-07!511;UBERON:0002298!8.45e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.14e-50,76;UBERON:0001474,2.82e-46,82;UBERON:0004765,1.26e-41,90;UBERON:0002390,1.79e-40,98;UBERON:0003061,1.79e-40,98;UBERON:0002405,4.36e-40,93;UBERON:0001434,7.52e-37,100;UBERON:0002193,3.86e-36,108;UBERON:0002204,1.65e-19,167;UBERON:0003081,3.74e-16,203;UBERON:0002384,2.22e-10,371;UBERON:0000926,6.72e-09,315;UBERON:0004120,6.72e-09,315;UBERON:0006603,6.72e-09,315 | |||
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|short_description=p4@ADAP2 | |||
}} |
Revision as of 12:53, 11 September 2013
Short description: | p4@ADAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ADAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_018404, uc002hfx.2, uc002hfy.2, uc010csk.2, uc010csl.2_5end |
EntrezGene: | ADAP2 |
HGNC: | 16487 |
UniProt: | Q9NPF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.14e-50 | 76 |
bone element | 2.82e-46 | 82 |
skeletal element | 1.26e-41 | 90 |
hematopoietic system | 1.79e-40 | 98 |
blood island | 1.79e-40 | 98 |
immune system | 4.36e-40 | 93 |
skeletal system | 7.52e-37 | 100 |
hemolymphoid system | 3.86e-36 | 108 |
musculoskeletal system | 1.65e-19 | 167 |
lateral plate mesoderm | 3.74e-16 | 203 |
connective tissue | 2.22e-10 | 371 |
mesoderm | 6.72e-09 | 315 |
mesoderm-derived structure | 6.72e-09 | 315 |
presumptive mesoderm | 6.72e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.