FFCP PHASE1:Hg19::chr17:2240775..2240812,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29026 | |||
|TSSclassifier=S | |||
|UniProt=O43147,B9A6J3 | |||
|association_with_transcript=0bp_to_ENST00000268989,ENST00000426855,NM_001098509,NM_014853,uc002fum.3,uc002fun.3,uc010vqw.1_5end | |||
|description=CAGE_peak_1_at_SGSM2_5end | |||
|id=chr17:2240775..2240812,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.99e-07!18;CL:0000789!3.99e-07!18;CL:0002420!3.99e-07!18;CL:0002419!3.99e-07!18;CL:0000790!3.99e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.36e-07;18!CL:0000789;4.36e-07;18!CL:0002419;4.36e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.99e-07,18;CL:0000789,3.99e-07,18;CL:0002420,3.99e-07,18;CL:0002419,3.99e-07,18;CL:0000790,3.99e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.36e-07;18!UBERON:0006601;5.67e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.03e-25!57;UBERON:0005068!2.03e-25!57;UBERON:0006241!2.03e-25!57;UBERON:0007135!2.03e-25!57;UBERON:0005743!1.12e-24!86;UBERON:0000073!2.96e-24!94;UBERON:0001016!2.96e-24!94;UBERON:0001017!4.25e-24!82;UBERON:0002616!8.55e-23!59;UBERON:0000955!2.08e-22!69;UBERON:0006238!2.08e-22!69;UBERON:0007023!2.31e-22!115;UBERON:0002780!6.63e-22!41;UBERON:0001890!6.63e-22!41;UBERON:0006240!6.63e-22!41;UBERON:0003080!3.24e-21!42;UBERON:0003075!1.26e-20!86;UBERON:0007284!1.26e-20!86;UBERON:0002346!1.80e-20!90;UBERON:0002020!2.74e-18!34;UBERON:0003528!2.74e-18!34;UBERON:0001893!5.01e-18!34;UBERON:0001869!1.07e-17!32;UBERON:0002791!1.89e-17!33;UBERON:0003056!2.06e-16!61;UBERON:0002619!1.19e-13!22;UBERON:0000956!1.30e-13!25;UBERON:0000203!1.30e-13!25;UBERON:0001950!2.47e-12!20;UBERON:0000153!4.27e-11!129;UBERON:0007811!4.27e-11!129;UBERON:0000924!7.98e-11!173;UBERON:0006601!7.98e-11!173;UBERON:0004121!1.14e-10!169;UBERON:0000033!2.70e-10!123 | |||
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| |||
|short_description=p1@SGSM2 | |||
}} |
Revision as of 12:38, 11 September 2013
Short description: | p1@SGSM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SGSM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000268989, ENST00000426855, NM_001098509, NM_014853, uc002fum.3, uc002fun.3, uc010vqw.1_5end |
EntrezGene: | SGSM2 |
HGNC: | 29026 |
UniProt: | O43147B9A6J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.99e-07 | 18 |
alpha-beta T cell | 3.99e-07 | 18 |
immature T cell | 3.99e-07 | 18 |
mature T cell | 3.99e-07 | 18 |
immature alpha-beta T cell | 3.99e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.