FFCP PHASE1:Hg19::chr17:10101952..10101963,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4169|TSSclassifier=S|UniProt=O60861,F5H2K0|association_with_transcript=-84bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end|coexpression_cluster_id=C1427|description=CAGE_peak_14_at_GAS7_5end|id=chr17:10101952..10101963,-|ontology_enrichment_celltype=CL:0000766!1.17e-41!76;CL:0000557!1.77e-34!71;CL:0000839!1.28e-33!70;CL:0002194!2.81e-33!63;CL:0000576!2.81e-33!63;CL:0000040!2.81e-33!63;CL:0000559!2.81e-33!63;CL:0002057!1.35e-31!42;CL:0002009!2.19e-31!65;CL:0000860!5.44e-28!45;CL:0000763!1.76e-25!112;CL:0000049!1.76e-25!112;CL:0000738!2.70e-17!140;CL:0002087!8.80e-14!119;CL:0000037!1.38e-13!172;CL:0000566!1.38e-13!172;CL:0002031!3.74e-13!124;CL:0002032!1.73e-12!165;CL:0000837!1.73e-12!165;CL:0000988!1.75e-12!182;CL:0002393!6.54e-08!9;CL:0002397!6.54e-08!9;CL:0000094!2.29e-07!8|ontology_enrichment_celltype_v019=CL:0000860;2.47e-43;33!CL:0002057;2.47e-43;33!CL:0000473;7.71e-43;39!CL:0000234;7.71e-43;39!CL:0000576;3.00e-40;48!CL:0000766;1.63e-36;69!CL:0000763;8.71e-20;100!CL:0000094;4.64e-14;8!CL:0000738;4.31e-12;136!CL:0002393;5.61e-11;6!CL:0002397;5.61e-11;6!CL:0002087;2.96e-10;104!CL:0000081;9.37e-10;11!CL:0000235;6.09e-09;6!CL:0002619;5.69e-07;3!CL:0000988;5.70e-07;177!CL:0000097;8.13e-07;5|ontology_enrichment_celltype_v019_2=CL:0000766,1.32e-90,72;CL:0000557,5.62e-76,67;CL:0000839,4.86e-74,66;CL:0002194,3.24e-71,59;CL:0000576,3.24e-71,59;CL:0000040,3.24e-71,59;CL:0000559,3.24e-71,59;CL:0000473,3.32e-70,48;CL:0000234,3.32e-70,48;CL:0002009,2.30e-68,61;CL:0000763,2.23e-64,108;CL:0000049,2.23e-64,108;CL:0000860,2.12e-62,42;CL:0002057,2.12e-62,42;CL:0000738,4.07e-48,136;CL:0000037,5.27e-42,168;CL:0002032,2.49e-40,161;CL:0000837,2.49e-40,161;CL:0000988,9.00e-39,177;CL:0002087,2.28e-37,115;CL:0002031,3.40e-37,120;CL:0002393,1.71e-15,9;CL:0002397,1.71e-15,9;CL:0000094,2.64e-14,8;CL:0000134,5.62e-12,354;CL:0002320,2.33e-11,361;CL:0000081,6.33e-10,11;CL:0000219,3.26e-09,386;CL:0000235,6.23e-09,6;CL:0000048,4.63e-07,427;CL:0002619,5.28e-07,3|ontology_enrichment_development_v019=CL:0002057;4.55e-45;42!CL:0000049;2.75e-19;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.73e-31!102;UBERON:0003061!3.73e-31!102;UBERON:0002193!1.26e-29!112;UBERON:0002371!4.40e-29!80;UBERON:0001474!4.83e-27!86;UBERON:0002405!5.13e-22!115;UBERON:0004765!8.49e-21!101;UBERON:0001434!8.49e-21!101;UBERON:0007023!8.64e-18!115;UBERON:0000062!4.93e-10!511;UBERON:0002204!5.50e-07!167;UBERON:0001049!6.29e-07!57;UBERON:0005068!6.29e-07!57;UBERON:0006241!6.29e-07!57;UBERON:0007135!6.29e-07!57;UBERON:0003075!7.75e-07!86;UBERON:0007284!7.75e-07!86;UBERON:0003081!7.94e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.33e-65,76;UBERON:0002390,7.34e-65,98;UBERON:0003061,7.34e-65,98;UBERON:0001474,3.38e-61,82;UBERON:0002193,5.14e-59,108;UBERON:0002405,5.30e-56,93;UBERON:0004765,3.51e-54,90;UBERON:0001434,5.43e-47,100;UBERON:0003081,2.40e-21,203;UBERON:0002204,3.19e-21,167;UBERON:0000926,2.00e-12,315;UBERON:0004120,2.00e-12,315;UBERON:0006603,2.00e-12,315;UBERON:0002384,1.38e-11,371|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,3.54027849164014,1.53531759238885,2.78669021968937,0,0,0,0,0,0.587200878669695,3.32397245119126,5.41470008169383,3.68918480216948,4.03047853631864,3.88672399222775,5.92423805558629,3.19876125315042,6.04601509902095,3.39617685662943,2.32429036905685,2.87817521615278,2.16794459626573,3.74000110018796,4.61089271752381,1.89185783910868,2.75796544589295,4.51839278508678,1.35426486594342,3.01187743268168,3.0019676506363,1.79778787556068,2.44867113896722,3.85114832491312,2.55734850319616,4.61791820261403,4.9865914405408,3.40979800426155,3.19230162491442,2.8369261234557,0.622822248995575,2.76373531782418,4.17186334736161,1.73751075764093,1.81619850790011,2.94622108790052,0.949387162322653,1.26753171787165,1.91343869968539,3.98351426465914,2.58355851636939,1.95229960693958,6.91120022797445,1.42506371870624,1.39241674039363,5.47992461293902,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.511450247374121,0,0,0,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.916853528483988,0,0,3.24547393654683,2.43781632218974,3.32394901297163,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0.933633106199299,0,0.163461903113459,0.908144565869588,0.576175924479999,0.468642863667593,0,0.570471821544449,0,0.117434498643765,0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1722,1.61144719933943,0,0.357107877211315,0,0,0.730336388246517,0.917458566809082,0,0,1.08786384305464,2.61810414204226,0.5290268405154,0.371995018166751,0,0,0,0.109265571963696,0,1.83579893535567,0,0.643264296743914,2.005660314339,1.13668047327359,1.87574891109325,0,0.413731983447581,0.213233981900981,1.42838658878244,0.581300188524055,0.682821857254437,0,0.0636471582781649,0,0.653150243690884,0,0.875576689189638,0.573777643141411,0.332660356546013,0,0,0,0,0,1.22241444182866,0.813792356631477,0.665756774185513,0.603821380773079,0|short_description=p14@GAS7}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |||
|TSSclassifier=S | |||
|UniProt=O60861,F5H2K0 | |||
|association_with_transcript=-84bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end | |||
|coexpression_cluster_id=C1427 | |||
|description=CAGE_peak_14_at_GAS7_5end | |||
|id=chr17:10101952..10101963,- | |||
|ontology_enrichment_celltype=CL:0000766!1.17e-41!76;CL:0000557!1.77e-34!71;CL:0000839!1.28e-33!70;CL:0002194!2.81e-33!63;CL:0000576!2.81e-33!63;CL:0000040!2.81e-33!63;CL:0000559!2.81e-33!63;CL:0002057!1.35e-31!42;CL:0002009!2.19e-31!65;CL:0000860!5.44e-28!45;CL:0000763!1.76e-25!112;CL:0000049!1.76e-25!112;CL:0000738!2.70e-17!140;CL:0002087!8.80e-14!119;CL:0000037!1.38e-13!172;CL:0000566!1.38e-13!172;CL:0002031!3.74e-13!124;CL:0002032!1.73e-12!165;CL:0000837!1.73e-12!165;CL:0000988!1.75e-12!182;CL:0002393!6.54e-08!9;CL:0002397!6.54e-08!9;CL:0000094!2.29e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-43;33!CL:0002057;2.47e-43;33!CL:0000473;7.71e-43;39!CL:0000234;7.71e-43;39!CL:0000576;3.00e-40;48!CL:0000766;1.63e-36;69!CL:0000763;8.71e-20;100!CL:0000094;4.64e-14;8!CL:0000738;4.31e-12;136!CL:0002393;5.61e-11;6!CL:0002397;5.61e-11;6!CL:0002087;2.96e-10;104!CL:0000081;9.37e-10;11!CL:0000235;6.09e-09;6!CL:0002619;5.69e-07;3!CL:0000988;5.70e-07;177!CL:0000097;8.13e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.32e-90,72;CL:0000557,5.62e-76,67;CL:0000839,4.86e-74,66;CL:0002194,3.24e-71,59;CL:0000576,3.24e-71,59;CL:0000040,3.24e-71,59;CL:0000559,3.24e-71,59;CL:0000473,3.32e-70,48;CL:0000234,3.32e-70,48;CL:0002009,2.30e-68,61;CL:0000763,2.23e-64,108;CL:0000049,2.23e-64,108;CL:0000860,2.12e-62,42;CL:0002057,2.12e-62,42;CL:0000738,4.07e-48,136;CL:0000037,5.27e-42,168;CL:0002032,2.49e-40,161;CL:0000837,2.49e-40,161;CL:0000988,9.00e-39,177;CL:0002087,2.28e-37,115;CL:0002031,3.40e-37,120;CL:0002393,1.71e-15,9;CL:0002397,1.71e-15,9;CL:0000094,2.64e-14,8;CL:0000134,5.62e-12,354;CL:0002320,2.33e-11,361;CL:0000081,6.33e-10,11;CL:0000219,3.26e-09,386;CL:0000235,6.23e-09,6;CL:0000048,4.63e-07,427;CL:0002619,5.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.55e-45;42!CL:0000049;2.75e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.73e-31!102;UBERON:0003061!3.73e-31!102;UBERON:0002193!1.26e-29!112;UBERON:0002371!4.40e-29!80;UBERON:0001474!4.83e-27!86;UBERON:0002405!5.13e-22!115;UBERON:0004765!8.49e-21!101;UBERON:0001434!8.49e-21!101;UBERON:0007023!8.64e-18!115;UBERON:0000062!4.93e-10!511;UBERON:0002204!5.50e-07!167;UBERON:0001049!6.29e-07!57;UBERON:0005068!6.29e-07!57;UBERON:0006241!6.29e-07!57;UBERON:0007135!6.29e-07!57;UBERON:0003075!7.75e-07!86;UBERON:0007284!7.75e-07!86;UBERON:0003081!7.94e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p14@GAS7 | |||
}} |
Revision as of 12:11, 11 September 2013
Short description: | p14@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_GAS7_5end |
Coexpression cluster: | C1427_Mast_Monocytederived_granulocyte_CD14_testicular_Macrophage_acute |
Association with transcript: | -84bp_to_ENST00000323816, ENST00000540214, NM_201433, uc002gmg.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | O60861F5H2K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.33e-65 | 76 |
hematopoietic system | 7.34e-65 | 98 |
blood island | 7.34e-65 | 98 |
bone element | 3.38e-61 | 82 |
hemolymphoid system | 5.14e-59 | 108 |
immune system | 5.30e-56 | 93 |
skeletal element | 3.51e-54 | 90 |
skeletal system | 5.43e-47 | 100 |
lateral plate mesoderm | 2.40e-21 | 203 |
musculoskeletal system | 3.19e-21 | 167 |
mesoderm | 2.00e-12 | 315 |
mesoderm-derived structure | 2.00e-12 | 315 |
presumptive mesoderm | 2.00e-12 | 315 |
connective tissue | 1.38e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.