FFCP PHASE1:Hg19::chr16:90001298..90001311,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:90001298..90001311,+|id=chr16:90001298..90001311,+|ontology_enrichment_celltype=CL:0000055!2.33e-16!180;CL:0002321!4.80e-10!248;CL:0000220!9.49e-10!246;CL:0000393!6.30e-09!60;CL:0000211!6.30e-09!60;CL:0000222!5.45e-08!119;CL:0000183!7.99e-08!59;CL:0000057!1.57e-07!75;CL:0000047!5.76e-07!8;CL:0000133!5.76e-07!59|ontology_enrichment_celltype_v019=CL:0000540;2.62e-12;6!CL:0000404;2.62e-12;6!CL:0000359;2.69e-07;32!CL:0002319;3.54e-07;25|ontology_enrichment_celltype_v019_2=CL:0000047,8.49e-13,8;CL:0000540,2.11e-12,6;CL:0000031,2.11e-12,6;CL:0000404,2.11e-12,6;CL:0000393,1.49e-09,61;CL:0000211,1.49e-09,61;CL:0002321,1.36e-07,250;CL:0000359,3.65e-07,32;CL:0002319,4.19e-07,25|ontology_enrichment_development_v019=CL:0000031;2.62e-12;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;5.65e-10;3!DOID:127;5.65e-10;3!DOID:0060072;1.45e-07;4|ontology_enrichment_disease_v019_2=DOID:0060084,2.78e-10,3;DOID:127,2.78e-10,3;DOID:0060072,8.61e-08,4|ontology_enrichment_uberon=UBERON:0000483!1.34e-08!309;UBERON:0000119!1.79e-08!312;UBERON:0000914!2.17e-08!83;UBERON:0002329!2.17e-08!83;UBERON:0003077!2.17e-08!83;UBERON:0003059!2.17e-08!83;UBERON:0007282!2.17e-08!83;UBERON:0009618!2.17e-08!83;UBERON:0007285!2.17e-08!83;UBERON:0001637!2.38e-08!42;UBERON:0003509!2.38e-08!42;UBERON:0004572!2.38e-08!42;UBERON:0000475!3.18e-08!365;UBERON:0000025!7.18e-08!194;UBERON:0005256!1.07e-07!143;UBERON:0001017!1.47e-07!82;UBERON:0005743!1.93e-07!86;UBERON:0002049!2.81e-07!79;UBERON:0007798!2.81e-07!79;UBERON:0003914!4.15e-07!118|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.09e-08,42;UBERON:0003509,1.09e-08,42;UBERON:0004572,1.09e-08,42|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,2.53299878168311,0,0.261185628199839,0,4.18680700783456,0.218441372130172,0.263766978228454,0.37129905888014,0.662794751455832,0,1.80808358407193,1.46062018077475,1.46379839637152,0.369363174230364,1.22400414746552,0,0,3.14811177667634,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,1.33037638477538,0.527008714158756,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,1.67799774483962,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0.805658634218294,0.760272105718513,1.70843440283719,0,1.62028389576352,0,0,0,0,0.949265659568129,0.549605231791222,0,0,0,0,0.506522046658319,0.264818361626438,0.573673241497627,1.06400514659507,1.12135520028461,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0.859840221182376,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0.500474079487857,0,0.438977620880838,0.30648779579902,0.300476117813194,0.567160915800105,1.07633781413317,0.213557388818567,0,0,0.206105058476878,0,0,0.168776332241266,0.487185025805993,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0,0.932949495138334,0.504641701751257,0.36497735907583,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,2.88662684050547,0.231860809950154,0.352226082707465,0.144366447761074,0,0.570762456703795,0,1.71697232418975,0,0,0,0,0.671928512795438,0.425325291727159,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,1.52795370223311,0,0,0.925447434329912,0.300343057843917,0.285826432630578,0,0,0.22001485746285,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,1.5985330740966,0,0,0.823240336780769,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0.821905290201534,0,0,0,0,0,0.254094624222463,1.30139853857622,2.31986643833309,1.67516265334349,5.10351001322531,0,0,0,0,2.50085260529839,0.271265023699736,0.207970861530807,1.07057393278297,0.315404830067869,0.117141414992713,0,0,2.0694614258501,0,0.921845842708516,0.434418072340414,0.391602314925481,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0,0.280660094433074,0,0,0.160853921143607,0,1.23367755042124,1.42049380250502,0,1.55776328755086,1.97557643381931,0.120859449591622,4.21063587636898,0.0920809889358963,0.459257792658427,0.910455840033585,0.786746489756545,0.902399225814824,0.847168708148562,0,0,0.316654886678627,0,0.340187410553031,0.431831832204279,1.54227252690289,0.541892875087706,2.00675909541941,0,0.831076008928724,2.23874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:90001298..90001311,+ | |||
|id=chr16:90001298..90001311,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.33e-16!180;CL:0002321!4.80e-10!248;CL:0000220!9.49e-10!246;CL:0000393!6.30e-09!60;CL:0000211!6.30e-09!60;CL:0000222!5.45e-08!119;CL:0000183!7.99e-08!59;CL:0000057!1.57e-07!75;CL:0000047!5.76e-07!8;CL:0000133!5.76e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.62e-12;6!CL:0000404;2.62e-12;6!CL:0000359;2.69e-07;32!CL:0002319;3.54e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.49e-13,8;CL:0000540,2.11e-12,6;CL:0000031,2.11e-12,6;CL:0000404,2.11e-12,6;CL:0000393,1.49e-09,61;CL:0000211,1.49e-09,61;CL:0002321,1.36e-07,250;CL:0000359,3.65e-07,32;CL:0002319,4.19e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.62e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.65e-10;3!DOID:127;5.65e-10;3!DOID:0060072;1.45e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.78e-10,3;DOID:127,2.78e-10,3;DOID:0060072,8.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000483!1.34e-08!309;UBERON:0000119!1.79e-08!312;UBERON:0000914!2.17e-08!83;UBERON:0002329!2.17e-08!83;UBERON:0003077!2.17e-08!83;UBERON:0003059!2.17e-08!83;UBERON:0007282!2.17e-08!83;UBERON:0009618!2.17e-08!83;UBERON:0007285!2.17e-08!83;UBERON:0001637!2.38e-08!42;UBERON:0003509!2.38e-08!42;UBERON:0004572!2.38e-08!42;UBERON:0000475!3.18e-08!365;UBERON:0000025!7.18e-08!194;UBERON:0005256!1.07e-07!143;UBERON:0001017!1.47e-07!82;UBERON:0005743!1.93e-07!86;UBERON:0002049!2.81e-07!79;UBERON:0007798!2.81e-07!79;UBERON:0003914!4.15e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.09e-08,42;UBERON:0003509,1.09e-08,42;UBERON:0004572,1.09e-08,42 | |||
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| |||
|short_description=p@chr16:90001298..90001311,+ | |||
}} |
Revision as of 12:08, 11 September 2013
Short description: | p@chr16:90001298..90001311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:90001298..90001311, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.49e-13 | 8 |
neuron | 2.11e-12 | 6 |
neuroblast | 2.11e-12 | 6 |
electrically signaling cell | 2.11e-12 | 6 |
electrically responsive cell | 1.49e-09 | 61 |
electrically active cell | 1.49e-09 | 61 |
embryonic cell | 1.36e-07 | 250 |
vascular associated smooth muscle cell | 3.65e-07 | 32 |
neural cell | 4.19e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
artery | 1.09e-08 | 42 |
arterial blood vessel | 1.09e-08 | 42 |
arterial system | 1.09e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.78e-10 | 3 |
leiomyoma | 2.78e-10 | 3 |
benign neoplasm | 8.61e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.