FFCP PHASE1:Hg19::chr16:80404220..80404224,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C979|description=CAGE_peak_at_chr16:80404220..80404224,+|id=chr16:80404220..80404224,+|ontology_enrichment_celltype=CL:0002057!3.50e-24!42;CL:0000839!1.83e-23!70;CL:0000557!4.34e-23!71;CL:0000860!2.12e-22!45;CL:0000766!2.30e-21!76;CL:0002194!2.67e-20!63;CL:0000576!2.67e-20!63;CL:0000040!2.67e-20!63;CL:0000559!2.67e-20!63;CL:0002009!1.36e-19!65;CL:0000763!1.88e-13!112;CL:0000049!1.88e-13!112;CL:0002031!7.88e-12!124;CL:0000738!4.25e-10!140;CL:0002087!2.02e-09!119;CL:0002032!4.58e-08!165;CL:0000837!4.58e-08!165;CL:0000037!1.33e-07!172;CL:0000566!1.33e-07!172;CL:1000306!4.29e-07!4;CL:0002547!4.29e-07!4;CL:0000988!5.26e-07!182|ontology_enrichment_celltype_v019=CL:0000860;5.74e-23;33!CL:0002057;5.74e-23;33!CL:0000473;1.99e-20;39!CL:0000234;1.99e-20;39!CL:0000576;1.80e-12;48!CL:0000766;5.99e-10;69!CL:0000097;4.93e-07;5|ontology_enrichment_celltype_v019_2=CL:0000473,2.16e-21,48;CL:0000234,2.16e-21,48;CL:0000839,7.23e-21,66;CL:0000557,1.45e-20,67;CL:0000766,3.53e-19,72;CL:0002194,3.48e-17,59;CL:0000576,3.48e-17,59;CL:0000040,3.48e-17,59;CL:0000559,3.48e-17,59;CL:0000860,3.83e-17,42;CL:0002057,3.83e-17,42;CL:0002009,1.22e-16,61;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002031,1.14e-11,120;CL:0000738,2.51e-10,136;CL:0002087,5.30e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000097,5.08e-07,5;CL:0002028,5.08e-07,5|ontology_enrichment_development_v019=CL:0002057;2.26e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.88e-20!80;UBERON:0001474!1.65e-18!86;UBERON:0002193!3.08e-17!112;UBERON:0002405!1.08e-16!115;UBERON:0004765!2.81e-15!101;UBERON:0001434!2.81e-15!101;UBERON:0002390!4.28e-15!102;UBERON:0003061!4.28e-15!102;UBERON:0003081!1.00e-12!216;UBERON:0002204!1.25e-11!167;UBERON:0000415!4.29e-07!4;UBERON:0007240!4.29e-07!4;UBERON:0005742!4.29e-07!4;UBERON:0005734!4.29e-07!4;UBERON:0004664!4.29e-07!4;UBERON:0004663!4.29e-07!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,2.01384674625505,0.512321413058201,4.96612682766029,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.199463657621632,1.27867425159808,0,1.13477044938228,0.622822248995575,0.502497330513487,0.521482918420201,1.95469960234605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,4.92663237895944,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:80404220..80404224,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C979 | |||
|description=CAGE_peak_at_chr16:80404220..80404224,+ | |||
|id=chr16:80404220..80404224,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.50e-24!42;CL:0000839!1.83e-23!70;CL:0000557!4.34e-23!71;CL:0000860!2.12e-22!45;CL:0000766!2.30e-21!76;CL:0002194!2.67e-20!63;CL:0000576!2.67e-20!63;CL:0000040!2.67e-20!63;CL:0000559!2.67e-20!63;CL:0002009!1.36e-19!65;CL:0000763!1.88e-13!112;CL:0000049!1.88e-13!112;CL:0002031!7.88e-12!124;CL:0000738!4.25e-10!140;CL:0002087!2.02e-09!119;CL:0002032!4.58e-08!165;CL:0000837!4.58e-08!165;CL:0000037!1.33e-07!172;CL:0000566!1.33e-07!172;CL:1000306!4.29e-07!4;CL:0002547!4.29e-07!4;CL:0000988!5.26e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.74e-23;33!CL:0002057;5.74e-23;33!CL:0000473;1.99e-20;39!CL:0000234;1.99e-20;39!CL:0000576;1.80e-12;48!CL:0000766;5.99e-10;69!CL:0000097;4.93e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.16e-21,48;CL:0000234,2.16e-21,48;CL:0000839,7.23e-21,66;CL:0000557,1.45e-20,67;CL:0000766,3.53e-19,72;CL:0002194,3.48e-17,59;CL:0000576,3.48e-17,59;CL:0000040,3.48e-17,59;CL:0000559,3.48e-17,59;CL:0000860,3.83e-17,42;CL:0002057,3.83e-17,42;CL:0002009,1.22e-16,61;CL:0000763,6.23e-13,108;CL:0000049,6.23e-13,108;CL:0002031,1.14e-11,120;CL:0000738,2.51e-10,136;CL:0002087,5.30e-09,115;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177;CL:0000097,5.08e-07,5;CL:0002028,5.08e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.88e-20!80;UBERON:0001474!1.65e-18!86;UBERON:0002193!3.08e-17!112;UBERON:0002405!1.08e-16!115;UBERON:0004765!2.81e-15!101;UBERON:0001434!2.81e-15!101;UBERON:0002390!4.28e-15!102;UBERON:0003061!4.28e-15!102;UBERON:0003081!1.00e-12!216;UBERON:0002204!1.25e-11!167;UBERON:0000415!4.29e-07!4;UBERON:0007240!4.29e-07!4;UBERON:0005742!4.29e-07!4;UBERON:0005734!4.29e-07!4;UBERON:0004664!4.29e-07!4;UBERON:0004663!4.29e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-18,76;UBERON:0001474,6.63e-17,82;UBERON:0004765,1.92e-15,90;UBERON:0002405,5.86e-15,93;UBERON:0002390,3.24e-14,98;UBERON:0003061,3.24e-14,98;UBERON:0001434,6.14e-14,100;UBERON:0002193,6.23e-13,108;UBERON:0002204,1.92e-08,167;UBERON:0003081,5.76e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,2.01384674625505,0.512321413058201,4.96612682766029,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.199463657621632,1.27867425159808,0,1.13477044938228,0.622822248995575,0.502497330513487,0.521482918420201,1.95469960234605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,4.92663237895944,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:80404220..80404224,+ | |||
}} |
Revision as of 11:40, 11 September 2013
Short description: | p@chr16:80404220..80404224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:80404220..80404224, + |
Coexpression cluster: | C979_Mast_CD14_Eosinophils_immature_Neutrophils_CD4_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.16e-21 | 48 |
phagocyte | 2.16e-21 | 48 |
myeloid lineage restricted progenitor cell | 7.23e-21 | 66 |
granulocyte monocyte progenitor cell | 1.45e-20 | 67 |
myeloid leukocyte | 3.53e-19 | 72 |
monopoietic cell | 3.48e-17 | 59 |
monocyte | 3.48e-17 | 59 |
monoblast | 3.48e-17 | 59 |
promonocyte | 3.48e-17 | 59 |
classical monocyte | 3.83e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-17 | 42 |
macrophage dendritic cell progenitor | 1.22e-16 | 61 |
myeloid cell | 6.23e-13 | 108 |
common myeloid progenitor | 6.23e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
leukocyte | 2.51e-10 | 136 |
nongranular leukocyte | 5.30e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
mast cell | 5.08e-07 | 5 |
basophil mast progenitor cell | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-18 | 76 |
bone element | 6.63e-17 | 82 |
skeletal element | 1.92e-15 | 90 |
immune system | 5.86e-15 | 93 |
hematopoietic system | 3.24e-14 | 98 |
blood island | 3.24e-14 | 98 |
skeletal system | 6.14e-14 | 100 |
hemolymphoid system | 6.23e-13 | 108 |
musculoskeletal system | 1.92e-08 | 167 |
lateral plate mesoderm | 5.76e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.