FFCP PHASE1:Hg19::chr16:727238..727277,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:727238..727277,+|id=chr16:727238..727277,+|ontology_enrichment_celltype=CL:0002076!4.29e-16!43;CL:0002368!6.20e-16!13;CL:0000066!2.78e-11!254;CL:0000223!4.93e-11!59;CL:0002202!1.27e-09!9;CL:0002632!1.27e-09!9;CL:0002159!2.47e-09!13;CL:0000240!3.22e-07!6;CL:0000311!3.22e-07!6;CL:0000079!3.22e-07!6;CL:0000237!3.22e-07!6;CL:0000036!3.22e-07!6;CL:0000357!3.22e-07!6;CL:0000114!3.22e-07!6|ontology_enrichment_celltype_v019=CL:0002368;3.07e-27;13!CL:0002076;1.59e-17;42!CL:0002202;1.20e-12;9!CL:0002632;1.20e-12;9!CL:0000240;5.81e-12;6!CL:0000311;5.81e-12;6!CL:0000079;5.81e-12;6!CL:0000237;5.81e-12;6!CL:0000244;3.51e-11;4!CL:0000731;3.51e-11;4!CL:0002159;4.47e-11;14!CL:0000575;7.16e-11;2!CL:0000312;2.38e-08;5!CL:0000307;3.07e-07;3!CL:0002328;6.54e-07;3!CL:0002077;9.44e-07;34|ontology_enrichment_celltype_v019_2=CL:0002368,1.71e-27,13;CL:0002076,1.97e-21,42;CL:0000223,9.08e-17,58;CL:0000066,9.83e-16,253;CL:0002202,7.72e-13,9;CL:0002632,7.72e-13,9;CL:0000240,1.04e-11,6;CL:0000311,1.04e-11,6;CL:0000079,1.04e-11,6;CL:0000237,1.04e-11,6;CL:0000036,1.04e-11,6;CL:0000357,1.04e-11,6;CL:0000114,1.04e-11,6;CL:0000244,3.90e-11,4;CL:0000731,3.90e-11,4;CL:0002159,5.69e-11,14;CL:0000575,7.18e-11,2;CL:0000312,4.30e-08,5;CL:0000068,3.08e-07,3;CL:0000069,3.08e-07,3;CL:0000307,3.08e-07,3;CL:0000377,3.08e-07,3;CL:0002077,3.13e-07,34;CL:0002328,4.30e-07,3|ontology_enrichment_development_v019=CL:0000357;5.81e-12;6!CL:0000114;5.81e-12;6!CL:0000223;9.86e-10;58!CL:0000377;3.07e-07;3|ontology_enrichment_disease=DOID:1749!3.92e-10!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!9.57e-13!72;UBERON:0004119!1.77e-12!169;UBERON:0000925!1.77e-12!169;UBERON:0006595!1.77e-12!169;UBERON:0000065!9.39e-11!53;UBERON:0003729!3.45e-09!5;UBERON:0005178!3.69e-09!34;UBERON:0002224!3.69e-09!34;UBERON:0007196!6.52e-09!14;UBERON:0001558!6.52e-09!14;UBERON:0005181!8.95e-09!35;UBERON:0001007!1.90e-08!155;UBERON:0001555!1.90e-08!155;UBERON:0007026!1.90e-08!155;UBERON:0003343!1.65e-07!4;UBERON:0004785!1.65e-07!4;UBERON:0000974!2.57e-07!10;UBERON:0000072!3.44e-07!46;UBERON:0005153!7.25e-07!37|ontology_enrichment_uberon_v019=UBERON:0000365;4.98e-09;5!UBERON:0005910;1.37e-07;6!UBERON:0007196;1.81e-07;15!UBERON:0001558;1.81e-07;15!UBERON:0004815;6.54e-07;3!UBERON:0002031;6.54e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.41e-09,5;UBERON:0001004,9.05e-08,74;UBERON:0007196,1.41e-07,15;UBERON:0001558,1.41e-07,15;UBERON:0005910,1.47e-07,6;UBERON:0004815,4.30e-07,3;UBERON:0002031,4.30e-07,3;UBERON:0004119,7.19e-07,160;UBERON:0000925,7.19e-07,160;UBERON:0006595,7.19e-07,160;UBERON:0000065,9.48e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,2.9580320813343,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,1.17030546773475,1.62961133316795,0.473447805734733,0,1.33692548262208,0.589211814949674,0,0.270803863765016,1.5370958367081,2.73124629875744,0,0.829050053357545,0,0.14828656316206,0,0,0.793165398882963,0,0.34362744548263,0.506039384039006,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,10.5645633604837,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84969293856562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.487894824518382,0.530119073285941,0.580969714347592,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,1.20634766893957,2.77765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.141775097242386,1.79117045405697,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,1.65745780084613,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.81813406897076,2.11409074101617,3.1903178123646,3.74283789165535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94510662174599,0,2.17781969722645,0.0941438007767792,2.15252686335615,3.36942951335251,2.66058092122005,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:727238..727277,+ | |||
|id=chr16:727238..727277,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.29e-16!43;CL:0002368!6.20e-16!13;CL:0000066!2.78e-11!254;CL:0000223!4.93e-11!59;CL:0002202!1.27e-09!9;CL:0002632!1.27e-09!9;CL:0002159!2.47e-09!13;CL:0000240!3.22e-07!6;CL:0000311!3.22e-07!6;CL:0000079!3.22e-07!6;CL:0000237!3.22e-07!6;CL:0000036!3.22e-07!6;CL:0000357!3.22e-07!6;CL:0000114!3.22e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.07e-27;13!CL:0002076;1.59e-17;42!CL:0002202;1.20e-12;9!CL:0002632;1.20e-12;9!CL:0000240;5.81e-12;6!CL:0000311;5.81e-12;6!CL:0000079;5.81e-12;6!CL:0000237;5.81e-12;6!CL:0000244;3.51e-11;4!CL:0000731;3.51e-11;4!CL:0002159;4.47e-11;14!CL:0000575;7.16e-11;2!CL:0000312;2.38e-08;5!CL:0000307;3.07e-07;3!CL:0002328;6.54e-07;3!CL:0002077;9.44e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.71e-27,13;CL:0002076,1.97e-21,42;CL:0000223,9.08e-17,58;CL:0000066,9.83e-16,253;CL:0002202,7.72e-13,9;CL:0002632,7.72e-13,9;CL:0000240,1.04e-11,6;CL:0000311,1.04e-11,6;CL:0000079,1.04e-11,6;CL:0000237,1.04e-11,6;CL:0000036,1.04e-11,6;CL:0000357,1.04e-11,6;CL:0000114,1.04e-11,6;CL:0000244,3.90e-11,4;CL:0000731,3.90e-11,4;CL:0002159,5.69e-11,14;CL:0000575,7.18e-11,2;CL:0000312,4.30e-08,5;CL:0000068,3.08e-07,3;CL:0000069,3.08e-07,3;CL:0000307,3.08e-07,3;CL:0000377,3.08e-07,3;CL:0002077,3.13e-07,34;CL:0002328,4.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.81e-12;6!CL:0000114;5.81e-12;6!CL:0000223;9.86e-10;58!CL:0000377;3.07e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!3.92e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!9.57e-13!72;UBERON:0004119!1.77e-12!169;UBERON:0000925!1.77e-12!169;UBERON:0006595!1.77e-12!169;UBERON:0000065!9.39e-11!53;UBERON:0003729!3.45e-09!5;UBERON:0005178!3.69e-09!34;UBERON:0002224!3.69e-09!34;UBERON:0007196!6.52e-09!14;UBERON:0001558!6.52e-09!14;UBERON:0005181!8.95e-09!35;UBERON:0001007!1.90e-08!155;UBERON:0001555!1.90e-08!155;UBERON:0007026!1.90e-08!155;UBERON:0003343!1.65e-07!4;UBERON:0004785!1.65e-07!4;UBERON:0000974!2.57e-07!10;UBERON:0000072!3.44e-07!46;UBERON:0005153!7.25e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.98e-09;5!UBERON:0005910;1.37e-07;6!UBERON:0007196;1.81e-07;15!UBERON:0001558;1.81e-07;15!UBERON:0004815;6.54e-07;3!UBERON:0002031;6.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.41e-09,5;UBERON:0001004,9.05e-08,74;UBERON:0007196,1.41e-07,15;UBERON:0001558,1.41e-07,15;UBERON:0005910,1.47e-07,6;UBERON:0004815,4.30e-07,3;UBERON:0002031,4.30e-07,3;UBERON:0004119,7.19e-07,160;UBERON:0000925,7.19e-07,160;UBERON:0006595,7.19e-07,160;UBERON:0000065,9.48e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,2.9580320813343,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,1.17030546773475,1.62961133316795,0.473447805734733,0,1.33692548262208,0.589211814949674,0,0.270803863765016,1.5370958367081,2.73124629875744,0,0.829050053357545,0,0.14828656316206,0,0,0.793165398882963,0,0.34362744548263,0.506039384039006,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,10.5645633604837,6.3033355273353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84969293856562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.487894824518382,0.530119073285941,0.580969714347592,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,1.20634766893957,2.77765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.141775097242386,1.79117045405697,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,1.65745780084613,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.81813406897076,2.11409074101617,3.1903178123646,3.74283789165535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94510662174599,0,2.17781969722645,0.0941438007767792,2.15252686335615,3.36942951335251,2.66058092122005,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0,0,0,0,0,1.82069517256799,2.79679015322043,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,2.73930466504926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.174118413160805,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0,0.977756913674015,0.160317640503067,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0,0.959575986597226,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.213574825135389,0,0,0,0,0.365377795142688,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09819261579167,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65552204308,0.589848616738702,1.83428598521679,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.687051635306701,0,0,0,0,0,0.701818390386317,0,0,0.67767649223376,0,5.73658805553359,0.154348316215889,0,9.87666322359198,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.714193294391221,0.322944549180031,0.186224142887574,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0.430333232356058,0.332660356546013,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr16:727238..727277,+ | |||
}} |
Revision as of 11:29, 11 September 2013
Short description: | p@chr16:727238..727277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:727238..727277, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.71e-27 | 13 |
endo-epithelial cell | 1.97e-21 | 42 |
endodermal cell | 9.08e-17 | 58 |
epithelial cell | 9.83e-16 | 253 |
epithelial cell of tracheobronchial tree | 7.72e-13 | 9 |
epithelial cell of lower respiratory tract | 7.72e-13 | 9 |
stratified squamous epithelial cell | 1.04e-11 | 6 |
keratin accumulating cell | 1.04e-11 | 6 |
stratified epithelial cell | 1.04e-11 | 6 |
keratinizing barrier epithelial cell | 1.04e-11 | 6 |
epithelial fate stem cell | 1.04e-11 | 6 |
stratified epithelial stem cell | 1.04e-11 | 6 |
surface ectodermal cell | 1.04e-11 | 6 |
transitional epithelial cell | 3.90e-11 | 4 |
urothelial cell | 3.90e-11 | 4 |
general ecto-epithelial cell | 5.69e-11 | 14 |
corneal epithelial cell | 7.18e-11 | 2 |
keratinocyte | 4.30e-08 | 5 |
duct epithelial cell | 3.08e-07 | 3 |
branched duct epithelial cell | 3.08e-07 | 3 |
tracheal epithelial cell | 3.08e-07 | 3 |
tracheoblast | 3.08e-07 | 3 |
ecto-epithelial cell | 3.13e-07 | 34 |
bronchial epithelial cell | 4.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.41e-09 | 5 |
respiratory system | 9.05e-08 | 74 |
tracheobronchial tree | 1.41e-07 | 15 |
lower respiratory tract | 1.41e-07 | 15 |
transitional epithelium | 1.47e-07 | 6 |
lower respiratory tract epithelium | 4.30e-07 | 3 |
epithelium of bronchus | 4.30e-07 | 3 |
endoderm-derived structure | 7.19e-07 | 160 |
endoderm | 7.19e-07 | 160 |
presumptive endoderm | 7.19e-07 | 160 |
respiratory tract | 9.48e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.