FFCP PHASE1:Hg19::chr16:70557193..70557205,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23450|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10770|TSSclassifier=W|UniProt=Q15393,A8K6V3|association_with_transcript=-485bp_to_ENST00000302516,NM_012426,uc002ezf.2_5end|description=CAGE_peak_4_at_SF3B3_5end|id=chr16:70557193..70557205,+|ontology_enrichment_celltype=CL:0000066!2.91e-10!254;CL:0002322!8.17e-07!5|ontology_enrichment_celltype_v019=CL:0000123;2.37e-10;2!CL:0000242;2.37e-10;2!CL:0000095;3.57e-09;17!CL:0000322;2.55e-07;3|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-10,2;CL:0000095,3.33e-09,17;CL:0000123,3.33e-09,17;CL:0000322,2.47e-07,3|ontology_enrichment_development_v019=UBERON:0006238;1.67e-07;10!UBERON:0003056;2.55e-07;3|ontology_enrichment_disease=DOID:14566!7.05e-15!239;DOID:162!1.76e-14!235;DOID:0050687!7.39e-12!143;DOID:305!3.94e-10!106|ontology_enrichment_disease_v019=DOID:3910;2.37e-10;2!DOID:3093;5.98e-07;11|ontology_enrichment_disease_v019_2=DOID:3910,2.27e-10,2;DOID:3093,6.35e-07,11|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0000490;1.70e-08;33!UBERON:0000487;5.32e-08;22!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3!UBERON:0006914;4.18e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.27e-10,2;UBERON:0002173,2.27e-10,2;UBERON:0002186,2.27e-10,2;UBERON:0000487,5.39e-08,22;UBERON:0004821,2.47e-07,3;UBERON:0003215,2.47e-07,3;UBERON:0010368,2.47e-07,3;UBERON:0009911,2.47e-07,3;UBERON:0002299,2.47e-07,3;UBERON:0006524,2.47e-07,3;UBERON:0008874,2.47e-07,3;UBERON:0002169,2.47e-07,3;UBERON:0004894,2.47e-07,3;UBERON:0006914,4.23e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,1.04142150482278,0,0,0.275118041940067,0.835979866147242,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,1.1409436430889,0,0.23486899728753,0,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0.600182192168805,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.397589304964456,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.448524337381443,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.495056999523528,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0.540911356951966,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,1.1249555075237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0.236387681767936,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0,0,0,0.282706142867882,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0.485560759068186,0,0,0,0.063186579628488,5.56196651833622,0.72581733978073,0.664653872707185,0,0,0,0,0,0,0,0.870592065804026,0,0,0.290268993867255,0.219267951258557,0.0821154570532092,0,0,0,0.274083849293502,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23450 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10770 | |||
|TSSclassifier=W | |||
|UniProt=Q15393,A8K6V3 | |||
|association_with_transcript=-485bp_to_ENST00000302516,NM_012426,uc002ezf.2_5end | |||
|description=CAGE_peak_4_at_SF3B3_5end | |||
|id=chr16:70557193..70557205,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.91e-10!254;CL:0002322!8.17e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.37e-10;2!CL:0000242;2.37e-10;2!CL:0000095;3.57e-09;17!CL:0000322;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-10,2;CL:0000095,3.33e-09,17;CL:0000123,3.33e-09,17;CL:0000322,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.67e-07;10!UBERON:0003056;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!7.05e-15!239;DOID:162!1.76e-14!235;DOID:0050687!7.39e-12!143;DOID:305!3.94e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.37e-10;2!DOID:3093;5.98e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.27e-10,2;DOID:3093,6.35e-07,11 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0000490;1.70e-08;33!UBERON:0000487;5.32e-08;22!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3!UBERON:0006914;4.18e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.27e-10,2;UBERON:0002173,2.27e-10,2;UBERON:0002186,2.27e-10,2;UBERON:0000487,5.39e-08,22;UBERON:0004821,2.47e-07,3;UBERON:0003215,2.47e-07,3;UBERON:0010368,2.47e-07,3;UBERON:0009911,2.47e-07,3;UBERON:0002299,2.47e-07,3;UBERON:0006524,2.47e-07,3;UBERON:0008874,2.47e-07,3;UBERON:0002169,2.47e-07,3;UBERON:0004894,2.47e-07,3;UBERON:0006914,4.23e-07,25 | |||
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|short_description=p4@SF3B3 | |||
}} |
Revision as of 11:22, 11 September 2013
Short description: | p4@SF3B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SF3B3_5end |
Coexpression cluster: | NA |
Association with transcript: | -485bp_to_ENST00000302516, NM_012426, uc002ezf.2_5end |
EntrezGene: | SF3B3 |
HGNC: | 10770 |
UniProt: | Q15393A8K6V3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.57e-10 | 2 |
neuron associated cell | 3.33e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.33e-09 | 17 |
pneumocyte | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.27e-10 | 2 |
alveolar duct | 2.27e-10 | 2 |
bronchiole | 2.27e-10 | 2 |
simple squamous epithelium | 5.39e-08 | 22 |
pulmonary alveolus epithelium | 2.47e-07 | 3 |
alveolus | 2.47e-07 | 3 |
pulmonary lobule | 2.47e-07 | 3 |
lobule | 2.47e-07 | 3 |
alveolus of lung | 2.47e-07 | 3 |
alveolar system | 2.47e-07 | 3 |
pulmonary acinus | 2.47e-07 | 3 |
alveolar sac | 2.47e-07 | 3 |
alveolar wall | 2.47e-07 | 3 |
squamous epithelium | 4.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.27e-10 | 2 |
nervous system cancer | 6.35e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.