FFCP PHASE1:Hg19::chr16:2518541..2518589,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=729652|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-327bp_to_AL834536_5end|coexpression_cluster_id=C171|description=CAGE_peak_1_at_LOC729652_5end|id=chr16:2518541..2518589,-|ontology_enrichment_celltype=CL:0002150!1.99e-08!3;CL:0000861!1.99e-08!3;CL:0000242!9.43e-07!2|ontology_enrichment_celltype_v019=CL:0000123;3.98e-41;2!CL:0000242;3.98e-41;2!CL:0000312;3.95e-17;5!CL:0000240;1.90e-14;6!CL:0000311;1.90e-14;6!CL:0000079;1.90e-14;6!CL:0000237;1.90e-14;6!CL:0000095;3.74e-10;17!CL:0000362;5.93e-10;9!CL:0002328;6.56e-08;3!CL:0002319;2.57e-07;25|ontology_enrichment_celltype_v019_2=CL:0000242,3.99e-41,2;CL:0000312,3.95e-17,5;CL:0000240,1.90e-14,6;CL:0000311,1.90e-14,6;CL:0000079,1.90e-14,6;CL:0000237,1.90e-14,6;CL:0000036,1.90e-14,6;CL:0000357,1.90e-14,6;CL:0000114,1.90e-14,6;CL:0000095,3.68e-10,17;CL:0000123,3.68e-10,17;CL:0000362,5.93e-10,9;CL:0002328,5.54e-08,3;CL:0000333,8.74e-08,41;CL:0002319,2.54e-07,25|ontology_enrichment_development_v019=CL:0000357;1.90e-14;6!CL:0000114;1.90e-14;6!UBERON:0003056;6.56e-08;3|ontology_enrichment_disease=DOID:305!1.15e-08!106;DOID:0050687!3.45e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!2.86e-09!9|ontology_enrichment_uberon_v019=UBERON:0002331;7.07e-09;10!UBERON:0004815;6.56e-08;3!UBERON:0002031;6.56e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.80e-09,10;UBERON:0000358,6.80e-09,10;UBERON:0000307,6.80e-09,10;UBERON:0000091,6.80e-09,10;UBERON:0000087,6.80e-09,10;UBERON:0007010,6.80e-09,10;UBERON:0007806,6.80e-09,10;UBERON:0008780,6.80e-09,10;UBERON:0005728,6.80e-09,10;UBERON:0004815,5.54e-08,3;UBERON:0002031,5.54e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.0787107813136792,0,0,0,1.83884244895785,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.441175890929576,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.77912677208373,0.86494757262552,1.46190729307638,0,0.802577647298789,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0.387025325156341,0.511625219603299,0.246346371159628,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.20116498503375,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0.415045904808692,0.124980407962107,0,0,0,2.81000943484129,6.95620937331961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,1.40683808434017,0,0,0.436838552768056,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,1.58013611732727,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,1.40363678077263,1.98950775161368,0,0,0.769583617218004,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0|short_description=p1@LOC729652}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=729652 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-327bp_to_AL834536_5end | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_1_at_LOC729652_5end | |||
|id=chr16:2518541..2518589,- | |||
|ontology_enrichment_celltype=CL:0002150!1.99e-08!3;CL:0000861!1.99e-08!3;CL:0000242!9.43e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.98e-41;2!CL:0000242;3.98e-41;2!CL:0000312;3.95e-17;5!CL:0000240;1.90e-14;6!CL:0000311;1.90e-14;6!CL:0000079;1.90e-14;6!CL:0000237;1.90e-14;6!CL:0000095;3.74e-10;17!CL:0000362;5.93e-10;9!CL:0002328;6.56e-08;3!CL:0002319;2.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.99e-41,2;CL:0000312,3.95e-17,5;CL:0000240,1.90e-14,6;CL:0000311,1.90e-14,6;CL:0000079,1.90e-14,6;CL:0000237,1.90e-14,6;CL:0000036,1.90e-14,6;CL:0000357,1.90e-14,6;CL:0000114,1.90e-14,6;CL:0000095,3.68e-10,17;CL:0000123,3.68e-10,17;CL:0000362,5.93e-10,9;CL:0002328,5.54e-08,3;CL:0000333,8.74e-08,41;CL:0002319,2.54e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-14;6!CL:0000114;1.90e-14;6!UBERON:0003056;6.56e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.15e-08!106;DOID:0050687!3.45e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.86e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.07e-09;10!UBERON:0004815;6.56e-08;3!UBERON:0002031;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.80e-09,10;UBERON:0000358,6.80e-09,10;UBERON:0000307,6.80e-09,10;UBERON:0000091,6.80e-09,10;UBERON:0000087,6.80e-09,10;UBERON:0007010,6.80e-09,10;UBERON:0007806,6.80e-09,10;UBERON:0008780,6.80e-09,10;UBERON:0005728,6.80e-09,10;UBERON:0004815,5.54e-08,3;UBERON:0002031,5.54e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.0787107813136792,0,0,0,1.83884244895785,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.441175890929576,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.77912677208373,0.86494757262552,1.46190729307638,0,0.802577647298789,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0.387025325156341,0.511625219603299,0.246346371159628,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.20116498503375,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0.415045904808692,0.124980407962107,0,0,0,2.81000943484129,6.95620937331961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,1.40683808434017,0,0,0.436838552768056,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,1.58013611732727,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,1.40363678077263,1.98950775161368,0,0,0.769583617218004,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p1@LOC729652 | |||
}} |
Revision as of 09:47, 11 September 2013
Short description: | p1@LOC729652 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC729652_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -327bp_to_AL834536_5end |
EntrezGene: | LOC729652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.99e-41 | 2 |
keratinocyte | 3.95e-17 | 5 |
stratified squamous epithelial cell | 1.90e-14 | 6 |
keratin accumulating cell | 1.90e-14 | 6 |
stratified epithelial cell | 1.90e-14 | 6 |
keratinizing barrier epithelial cell | 1.90e-14 | 6 |
epithelial fate stem cell | 1.90e-14 | 6 |
stratified epithelial stem cell | 1.90e-14 | 6 |
surface ectodermal cell | 1.90e-14 | 6 |
neuron associated cell | 3.68e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 3.68e-10 | 17 |
epidermal cell | 5.93e-10 | 9 |
bronchial epithelial cell | 5.54e-08 | 3 |
migratory neural crest cell | 8.74e-08 | 41 |
neural cell | 2.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.80e-09 | 10 |
blastocyst | 6.80e-09 | 10 |
blastula | 6.80e-09 | 10 |
bilaminar disc | 6.80e-09 | 10 |
inner cell mass | 6.80e-09 | 10 |
cleaving embryo | 6.80e-09 | 10 |
connecting stalk | 6.80e-09 | 10 |
inner cell mass derived epiblast | 6.80e-09 | 10 |
extraembryonic mesoderm | 6.80e-09 | 10 |
lower respiratory tract epithelium | 5.54e-08 | 3 |
epithelium of bronchus | 5.54e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.