FFCP PHASE1:Hg19::chr16:11670817..11670855,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C537|description=CAGE_peak_at_chr16:11670817..11670855,-|id=chr16:11670817..11670855,-|ontology_enrichment_celltype=CL:0002009!5.28e-71!65;CL:0000766!3.55e-69!76;CL:0002057!5.07e-68!42;CL:0002194!7.25e-67!63;CL:0000576!7.25e-67!63;CL:0000040!7.25e-67!63;CL:0000559!7.25e-67!63;CL:0000557!1.82e-66!71;CL:0000860!1.20e-62!45;CL:0000839!2.24e-61!70;CL:0000738!5.42e-61!140;CL:0002087!2.21e-56!119;CL:0002031!8.02e-56!124;CL:0000763!4.57e-46!112;CL:0000049!4.57e-46!112;CL:0000037!5.15e-46!172;CL:0000566!5.15e-46!172;CL:0002032!1.64e-45!165;CL:0000837!1.64e-45!165;CL:0000988!7.81e-44!182;CL:0000134!8.50e-15!358;CL:0002320!3.79e-14!365;CL:0002393!3.12e-13!9;CL:0002397!3.12e-13!9;CL:0000219!1.70e-12!390;CL:0000034!1.87e-09!444;CL:0000048!3.36e-09!430;CL:0000840!6.94e-09!5;CL:0001029!6.94e-09!5;CL:0000723!7.97e-09!436;CL:0000775!3.12e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.22e-110;33!CL:0002057;1.22e-110;33!CL:0000473;3.42e-81;39!CL:0000234;3.42e-81;39!CL:0000576;1.52e-57;48!CL:0000766;3.50e-35;69!CL:0000763;6.83e-15;100!CL:0002087;5.49e-14;104!CL:0001014;7.72e-12;2!CL:0001016;7.72e-12;2!CL:0000738;3.95e-11;136|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-105,42;CL:0002057,2.19e-105,42;CL:0000473,9.49e-98,48;CL:0000234,9.49e-98,48;CL:0002009,4.48e-85,61;CL:0000557,5.32e-77,67;CL:0002194,5.96e-77,59;CL:0000576,5.96e-77,59;CL:0000040,5.96e-77,59;CL:0000559,5.96e-77,59;CL:0000766,5.68e-71,72;CL:0000839,2.96e-68,66;CL:0000763,6.79e-52,108;CL:0000049,6.79e-52,108;CL:0002031,3.60e-43,120;CL:0000738,1.63e-42,136;CL:0002087,2.05e-39,115;CL:0002032,6.62e-35,161;CL:0000837,6.62e-35,161;CL:0000037,3.54e-33,168;CL:0000988,3.74e-31,177;CL:0000134,3.90e-12,354;CL:0001014,6.40e-12,2;CL:0001016,6.40e-12,2;CL:0002320,9.19e-12,361;CL:0000219,1.89e-10,386;CL:0000034,5.67e-10,441;CL:0000048,7.66e-09,427;CL:0000723,1.28e-08,433|ontology_enrichment_development_v019=CL:0002057;3.56e-77;42!CL:0000049;2.10e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.08e-59!80;UBERON:0001474!1.81e-54!86;UBERON:0002390!3.01e-51!102;UBERON:0003061!3.01e-51!102;UBERON:0002193!5.09e-47!112;UBERON:0002405!3.80e-45!115;UBERON:0004765!4.10e-44!101;UBERON:0001434!4.10e-44!101;UBERON:0002204!9.20e-21!167;UBERON:0003081!1.54e-18!216;UBERON:0002384!6.76e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-67,76;UBERON:0001474,6.48e-62,82;UBERON:0004765,6.71e-56,90;UBERON:0002405,6.59e-54,93;UBERON:0002390,7.43e-51,98;UBERON:0003061,7.43e-51,98;UBERON:0001434,1.02e-49,100;UBERON:0002193,1.37e-45,108;UBERON:0002204,2.95e-27,167;UBERON:0003081,2.88e-21,203;UBERON:0000926,2.46e-11,315;UBERON:0004120,2.46e-11,315;UBERON:0006603,2.46e-11,315;UBERON:0002384,2.96e-11,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.410502947249729,0.0787107813136792,0,0.383829398097213,1.08371286321253,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0.223915474239924,0,0.257575567634187,0.145398238779565,4.53451132426571,1.69808842831471,3.0215774797739,7.40102198439286,15.4853185447552,1.1507695692886,4.61089271752381,5.20260905754887,4.13694816883942,5.80936215225443,10.8341189275473,3.76484679085209,3.0019676506363,6.29225756446237,2.75475503133812,9.30694178520671,6.39337125799041,0.989553900560148,1.59570926097305,2.13112375266347,2.61188314765726,3.40431134814684,2.4912889959823,7.5374599577023,5.21482918420201,12.1625753034865,1.21079900526674,3.68277635987565,2.84816148696796,1.05627643155971,0.850417199860174,0.209658645508376,0,0,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.77005821767849,0,0,0,0,0,0.749007023947182,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,15.748172408605,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,3.557009374163,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233|short_description=p@chr16:11670817..11670855,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_at_chr16:11670817..11670855,- | |||
|id=chr16:11670817..11670855,- | |||
|ontology_enrichment_celltype=CL:0002009!5.28e-71!65;CL:0000766!3.55e-69!76;CL:0002057!5.07e-68!42;CL:0002194!7.25e-67!63;CL:0000576!7.25e-67!63;CL:0000040!7.25e-67!63;CL:0000559!7.25e-67!63;CL:0000557!1.82e-66!71;CL:0000860!1.20e-62!45;CL:0000839!2.24e-61!70;CL:0000738!5.42e-61!140;CL:0002087!2.21e-56!119;CL:0002031!8.02e-56!124;CL:0000763!4.57e-46!112;CL:0000049!4.57e-46!112;CL:0000037!5.15e-46!172;CL:0000566!5.15e-46!172;CL:0002032!1.64e-45!165;CL:0000837!1.64e-45!165;CL:0000988!7.81e-44!182;CL:0000134!8.50e-15!358;CL:0002320!3.79e-14!365;CL:0002393!3.12e-13!9;CL:0002397!3.12e-13!9;CL:0000219!1.70e-12!390;CL:0000034!1.87e-09!444;CL:0000048!3.36e-09!430;CL:0000840!6.94e-09!5;CL:0001029!6.94e-09!5;CL:0000723!7.97e-09!436;CL:0000775!3.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-110;33!CL:0002057;1.22e-110;33!CL:0000473;3.42e-81;39!CL:0000234;3.42e-81;39!CL:0000576;1.52e-57;48!CL:0000766;3.50e-35;69!CL:0000763;6.83e-15;100!CL:0002087;5.49e-14;104!CL:0001014;7.72e-12;2!CL:0001016;7.72e-12;2!CL:0000738;3.95e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-105,42;CL:0002057,2.19e-105,42;CL:0000473,9.49e-98,48;CL:0000234,9.49e-98,48;CL:0002009,4.48e-85,61;CL:0000557,5.32e-77,67;CL:0002194,5.96e-77,59;CL:0000576,5.96e-77,59;CL:0000040,5.96e-77,59;CL:0000559,5.96e-77,59;CL:0000766,5.68e-71,72;CL:0000839,2.96e-68,66;CL:0000763,6.79e-52,108;CL:0000049,6.79e-52,108;CL:0002031,3.60e-43,120;CL:0000738,1.63e-42,136;CL:0002087,2.05e-39,115;CL:0002032,6.62e-35,161;CL:0000837,6.62e-35,161;CL:0000037,3.54e-33,168;CL:0000988,3.74e-31,177;CL:0000134,3.90e-12,354;CL:0001014,6.40e-12,2;CL:0001016,6.40e-12,2;CL:0002320,9.19e-12,361;CL:0000219,1.89e-10,386;CL:0000034,5.67e-10,441;CL:0000048,7.66e-09,427;CL:0000723,1.28e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.56e-77;42!CL:0000049;2.10e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-59!80;UBERON:0001474!1.81e-54!86;UBERON:0002390!3.01e-51!102;UBERON:0003061!3.01e-51!102;UBERON:0002193!5.09e-47!112;UBERON:0002405!3.80e-45!115;UBERON:0004765!4.10e-44!101;UBERON:0001434!4.10e-44!101;UBERON:0002204!9.20e-21!167;UBERON:0003081!1.54e-18!216;UBERON:0002384!6.76e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-67,76;UBERON:0001474,6.48e-62,82;UBERON:0004765,6.71e-56,90;UBERON:0002405,6.59e-54,93;UBERON:0002390,7.43e-51,98;UBERON:0003061,7.43e-51,98;UBERON:0001434,1.02e-49,100;UBERON:0002193,1.37e-45,108;UBERON:0002204,2.95e-27,167;UBERON:0003081,2.88e-21,203;UBERON:0000926,2.46e-11,315;UBERON:0004120,2.46e-11,315;UBERON:0006603,2.46e-11,315;UBERON:0002384,2.96e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.410502947249729,0.0787107813136792,0,0.383829398097213,1.08371286321253,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0.223915474239924,0,0.257575567634187,0.145398238779565,4.53451132426571,1.69808842831471,3.0215774797739,7.40102198439286,15.4853185447552,1.1507695692886,4.61089271752381,5.20260905754887,4.13694816883942,5.80936215225443,10.8341189275473,3.76484679085209,3.0019676506363,6.29225756446237,2.75475503133812,9.30694178520671,6.39337125799041,0.989553900560148,1.59570926097305,2.13112375266347,2.61188314765726,3.40431134814684,2.4912889959823,7.5374599577023,5.21482918420201,12.1625753034865,1.21079900526674,3.68277635987565,2.84816148696796,1.05627643155971,0.850417199860174,0.209658645508376,0,0,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.77005821767849,0,0,0,0,0,0.749007023947182,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,15.748172408605,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,3.557009374163,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p@chr16:11670817..11670855,- | |||
}} |
Revision as of 09:13, 11 September 2013
Short description: | p@chr16:11670817..11670855, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:11670817..11670855, - |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-67 | 76 |
bone element | 6.48e-62 | 82 |
skeletal element | 6.71e-56 | 90 |
immune system | 6.59e-54 | 93 |
hematopoietic system | 7.43e-51 | 98 |
blood island | 7.43e-51 | 98 |
skeletal system | 1.02e-49 | 100 |
hemolymphoid system | 1.37e-45 | 108 |
musculoskeletal system | 2.95e-27 | 167 |
lateral plate mesoderm | 2.88e-21 | 203 |
mesoderm | 2.46e-11 | 315 |
mesoderm-derived structure | 2.46e-11 | 315 |
presumptive mesoderm | 2.46e-11 | 315 |
connective tissue | 2.96e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.