FFCP PHASE1:Hg19::chr15:93827399..93827403,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1416|description=CAGE_peak_at_chr15:93827399..93827403,+|id=chr15:93827399..93827403,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.25e-56!57;UBERON:0005068!2.25e-56!57;UBERON:0006241!2.25e-56!57;UBERON:0007135!2.25e-56!57;UBERON:0002616!1.47e-48!59;UBERON:0002780!2.10e-48!41;UBERON:0001890!2.10e-48!41;UBERON:0006240!2.10e-48!41;UBERON:0003080!3.15e-47!42;UBERON:0001893!1.06e-43!34;UBERON:0000955!1.20e-40!69;UBERON:0006238!1.20e-40!69;UBERON:0002791!2.70e-38!33;UBERON:0001017!3.97e-38!82;UBERON:0003075!1.01e-36!86;UBERON:0007284!1.01e-36!86;UBERON:0005743!2.82e-36!86;UBERON:0002346!5.42e-35!90;UBERON:0001869!5.17e-33!32;UBERON:0000073!1.15e-32!94;UBERON:0001016!1.15e-32!94;UBERON:0003056!4.53e-32!61;UBERON:0002619!4.83e-32!22;UBERON:0002020!5.19e-31!34;UBERON:0003528!5.19e-31!34;UBERON:0007023!2.67e-30!115;UBERON:0000956!3.22e-28!25;UBERON:0000203!3.22e-28!25;UBERON:0001950!8.87e-28!20;UBERON:0000033!1.08e-24!123;UBERON:0000153!1.95e-23!129;UBERON:0007811!1.95e-23!129;UBERON:0002298!2.57e-19!8;UBERON:0000349!4.70e-18!5;UBERON:0004121!3.18e-17!169;UBERON:0000924!9.08e-17!173;UBERON:0006601!9.08e-17!173;UBERON:0000025!7.40e-15!194;UBERON:0001896!6.12e-14!3;UBERON:0005290!6.12e-14!3;UBERON:0010096!6.12e-14!3;UBERON:0004111!2.08e-11!241;UBERON:0002336!2.53e-11!1;UBERON:0001018!2.53e-11!1;UBERON:0002473!2.53e-11!1;UBERON:0005340!2.53e-11!1;UBERON:0002316!2.53e-11!1;UBERON:0003544!2.53e-11!1;UBERON:0001020!2.53e-11!1;UBERON:0005970!2.53e-11!1;UBERON:0002437!2.53e-11!1;UBERON:0001882!4.58e-11!1;UBERON:0005403!4.58e-11!1;UBERON:0002902!6.77e-11!1;UBERON:0009899!6.77e-11!1;UBERON:0007190!7.46e-11!1;UBERON:0003112!8.22e-11!1;UBERON:0000032!8.22e-11!1;UBERON:0005253!8.22e-11!1;UBERON:0003128!8.22e-11!1;UBERON:0002241!8.22e-11!1;UBERON:0001703!8.22e-11!1;UBERON:0004761!8.22e-11!1;UBERON:0009617!8.22e-11!1;UBERON:0002038!9.05e-11!1;UBERON:0009661!9.05e-11!1;UBERON:0002581!1.21e-10!1;UBERON:0002022!1.33e-10!1;UBERON:0003076!1.65e-10!15;UBERON:0003057!1.65e-10!15;UBERON:0000477!2.06e-10!286;UBERON:0002420!3.36e-10!9;UBERON:0007245!3.36e-10!9;UBERON:0010009!3.36e-10!9;UBERON:0010011!3.36e-10!9;UBERON:0000454!3.36e-10!9;UBERON:0002021!1.09e-08!5;UBERON:0001872!1.66e-08!5;UBERON:0000483!3.00e-08!309;UBERON:0000119!3.85e-08!312;UBERON:0004733!9.42e-08!12;UBERON:0002028!9.42e-08!12;UBERON:0007277!9.42e-08!12;UBERON:0000475!1.81e-07!365;UBERON:0000064!2.78e-07!219;UBERON:0004732!3.43e-07!13;UBERON:0000200!3.46e-07!6|ontology_enrichment_uberon_v019=UBERON:0002336;5.42e-195;1!UBERON:0011215;5.42e-195;1!UBERON:0001018;5.42e-195;1!UBERON:0002473;5.42e-195;1!UBERON:0005340;5.42e-195;1!UBERON:0003544;5.42e-195;1!UBERON:0005970;5.42e-195;1!UBERON:0002316;5.42e-195;1!UBERON:0001020;5.42e-195;1!UBERON:0002437;5.42e-195;1!UBERON:0005162;1.55e-98;2!UBERON:0000122;1.55e-98;2!UBERON:0001893;2.32e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0002336,5.42e-195,1;UBERON:0011215,5.42e-195,1;UBERON:0001018,5.42e-195,1;UBERON:0002473,5.42e-195,1;UBERON:0005340,5.42e-195,1;UBERON:0003544,5.42e-195,1;UBERON:0005970,5.42e-195,1;UBERON:0002316,5.42e-195,1;UBERON:0001020,5.42e-195,1;UBERON:0002437,5.42e-195,1;UBERON:0005162,1.55e-98,2;UBERON:0000122,1.55e-98,2;UBERON:0001893,4.03e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7524294574976,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.615349092722265,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:93827399..93827403,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1416 | |||
|description=CAGE_peak_at_chr15:93827399..93827403,+ | |||
|id=chr15:93827399..93827403,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.25e-56!57;UBERON:0005068!2.25e-56!57;UBERON:0006241!2.25e-56!57;UBERON:0007135!2.25e-56!57;UBERON:0002616!1.47e-48!59;UBERON:0002780!2.10e-48!41;UBERON:0001890!2.10e-48!41;UBERON:0006240!2.10e-48!41;UBERON:0003080!3.15e-47!42;UBERON:0001893!1.06e-43!34;UBERON:0000955!1.20e-40!69;UBERON:0006238!1.20e-40!69;UBERON:0002791!2.70e-38!33;UBERON:0001017!3.97e-38!82;UBERON:0003075!1.01e-36!86;UBERON:0007284!1.01e-36!86;UBERON:0005743!2.82e-36!86;UBERON:0002346!5.42e-35!90;UBERON:0001869!5.17e-33!32;UBERON:0000073!1.15e-32!94;UBERON:0001016!1.15e-32!94;UBERON:0003056!4.53e-32!61;UBERON:0002619!4.83e-32!22;UBERON:0002020!5.19e-31!34;UBERON:0003528!5.19e-31!34;UBERON:0007023!2.67e-30!115;UBERON:0000956!3.22e-28!25;UBERON:0000203!3.22e-28!25;UBERON:0001950!8.87e-28!20;UBERON:0000033!1.08e-24!123;UBERON:0000153!1.95e-23!129;UBERON:0007811!1.95e-23!129;UBERON:0002298!2.57e-19!8;UBERON:0000349!4.70e-18!5;UBERON:0004121!3.18e-17!169;UBERON:0000924!9.08e-17!173;UBERON:0006601!9.08e-17!173;UBERON:0000025!7.40e-15!194;UBERON:0001896!6.12e-14!3;UBERON:0005290!6.12e-14!3;UBERON:0010096!6.12e-14!3;UBERON:0004111!2.08e-11!241;UBERON:0002336!2.53e-11!1;UBERON:0001018!2.53e-11!1;UBERON:0002473!2.53e-11!1;UBERON:0005340!2.53e-11!1;UBERON:0002316!2.53e-11!1;UBERON:0003544!2.53e-11!1;UBERON:0001020!2.53e-11!1;UBERON:0005970!2.53e-11!1;UBERON:0002437!2.53e-11!1;UBERON:0001882!4.58e-11!1;UBERON:0005403!4.58e-11!1;UBERON:0002902!6.77e-11!1;UBERON:0009899!6.77e-11!1;UBERON:0007190!7.46e-11!1;UBERON:0003112!8.22e-11!1;UBERON:0000032!8.22e-11!1;UBERON:0005253!8.22e-11!1;UBERON:0003128!8.22e-11!1;UBERON:0002241!8.22e-11!1;UBERON:0001703!8.22e-11!1;UBERON:0004761!8.22e-11!1;UBERON:0009617!8.22e-11!1;UBERON:0002038!9.05e-11!1;UBERON:0009661!9.05e-11!1;UBERON:0002581!1.21e-10!1;UBERON:0002022!1.33e-10!1;UBERON:0003076!1.65e-10!15;UBERON:0003057!1.65e-10!15;UBERON:0000477!2.06e-10!286;UBERON:0002420!3.36e-10!9;UBERON:0007245!3.36e-10!9;UBERON:0010009!3.36e-10!9;UBERON:0010011!3.36e-10!9;UBERON:0000454!3.36e-10!9;UBERON:0002021!1.09e-08!5;UBERON:0001872!1.66e-08!5;UBERON:0000483!3.00e-08!309;UBERON:0000119!3.85e-08!312;UBERON:0004733!9.42e-08!12;UBERON:0002028!9.42e-08!12;UBERON:0007277!9.42e-08!12;UBERON:0000475!1.81e-07!365;UBERON:0000064!2.78e-07!219;UBERON:0004732!3.43e-07!13;UBERON:0000200!3.46e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;5.42e-195;1!UBERON:0011215;5.42e-195;1!UBERON:0001018;5.42e-195;1!UBERON:0002473;5.42e-195;1!UBERON:0005340;5.42e-195;1!UBERON:0003544;5.42e-195;1!UBERON:0005970;5.42e-195;1!UBERON:0002316;5.42e-195;1!UBERON:0001020;5.42e-195;1!UBERON:0002437;5.42e-195;1!UBERON:0005162;1.55e-98;2!UBERON:0000122;1.55e-98;2!UBERON:0001893;2.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,5.42e-195,1;UBERON:0011215,5.42e-195,1;UBERON:0001018,5.42e-195,1;UBERON:0002473,5.42e-195,1;UBERON:0005340,5.42e-195,1;UBERON:0003544,5.42e-195,1;UBERON:0005970,5.42e-195,1;UBERON:0002316,5.42e-195,1;UBERON:0001020,5.42e-195,1;UBERON:0002437,5.42e-195,1;UBERON:0005162,1.55e-98,2;UBERON:0000122,1.55e-98,2;UBERON:0001893,4.03e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7524294574976,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.615349092722265,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:93827399..93827403,+ | |||
}} |
Revision as of 09:01, 11 September 2013
Short description: | p@chr15:93827399..93827403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:93827399..93827403, + |
Coexpression cluster: | C1416_corpus_diencephalon_medulla_spinal_thalamus_caudate_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 5.42e-195 | 1 |
central nervous system cell part cluster | 5.42e-195 | 1 |
axon tract | 5.42e-195 | 1 |
intercerebral commissure | 5.42e-195 | 1 |
dorsal telencephalic commissure | 5.42e-195 | 1 |
brain white matter | 5.42e-195 | 1 |
brain commissure | 5.42e-195 | 1 |
white matter | 5.42e-195 | 1 |
nervous system commissure | 5.42e-195 | 1 |
cerebral hemisphere white matter | 5.42e-195 | 1 |
multi cell component structure | 1.55e-98 | 2 |
neuron projection bundle | 1.55e-98 | 2 |
telencephalon | 4.03e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.