FFCP PHASE1:Hg19::chr15:90777277..90777301,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10519|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16920|TSSclassifier=S|UniProt=Q99828|association_with_transcript=0bp_to_ENST00000328649,NM_006384,uc002bpb.3_5end|description=CAGE_peak_4_at_CIB1_5end|id=chr15:90777277..90777301,-|ontology_enrichment_celltype=CL:0002087!3.02e-10!119;CL:0000838!4.37e-10!52;CL:0000542!1.75e-09!53;CL:0000051!1.75e-09!53;CL:0000791!1.47e-08!18;CL:0000789!1.47e-08!18;CL:0002420!1.47e-08!18;CL:0002419!1.47e-08!18;CL:0000790!1.47e-08!18;CL:0000084!1.65e-08!25;CL:0000827!1.65e-08!25;CL:0002031!1.87e-08!124;CL:0000738!1.95e-07!140|ontology_enrichment_celltype_v019=CL:0000791;8.32e-17;18!CL:0000789;8.32e-17;18!CL:0002419;8.32e-17;18!CL:0000084;4.02e-14;25!CL:0000625;4.05e-10;11!CL:0000624;6.26e-10;6!CL:0000542;8.86e-10;53!CL:1000507;4.92e-08;10!CL:1000494;4.92e-08;10!CL:0002202;4.35e-07;9!CL:0002632;4.35e-07;9|ontology_enrichment_celltype_v019_2=CL:0000791,1.59e-17,18;CL:0000789,1.59e-17,18;CL:0002420,1.59e-17,18;CL:0002419,1.59e-17,18;CL:0000790,1.59e-17,18;CL:0000838,1.99e-16,52;CL:0000542,6.09e-16,53;CL:0000051,6.09e-16,53;CL:0000084,1.70e-14,25;CL:0000827,1.70e-14,25;CL:0002087,1.03e-12,115;CL:0000738,2.14e-11,136;CL:0002031,4.89e-11,120;CL:0000625,1.20e-10,11;CL:0000624,3.80e-10,6;CL:1000507,1.97e-07,10;CL:1000494,1.97e-07,10;CL:0000037,2.36e-07,168;CL:0002202,4.94e-07,9;CL:0002632,4.94e-07,9;CL:0000988,8.78e-07,177;CL:0002032,9.28e-07,161;CL:0000837,9.28e-07,161|ontology_enrichment_development_v019=CL:0000790;8.32e-17;18!CL:0000051;8.86e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004211;4.92e-08;10!UBERON:0009773;4.92e-08;10!UBERON:0001231;4.92e-08;10!UBERON:0004810;4.92e-08;10!UBERON:0006554;2.08e-07;30!UBERON:0001008;2.08e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.97e-07,10|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,1.04474251279935,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.861847406537515,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0.687720651731561,0.246301768349837,0.314843125254717,0.786728553697808,1.53531759238885,1.08371286321253,3.67768489791571,2.71085326900425,2.21852406100073,0.0774672005803016,0.142169232487422,0.587200878669695,2.21598163412751,1.00272223735071,0.868043482863407,0.223915474239924,0.32389366601898,0,1.01778767145695,0.377875943688809,1.4555043671269,0.697287110717054,0.822335776043652,1.54853185447552,0.28769239232215,1.0246428261164,2.60130452877444,0.344745680736619,0,2.70852973188684,0.752969358170419,0.272906150057846,1.57306439111559,0.612167784741805,1.60464513538047,1.27867425159808,0.989553900560148,1.39624560335142,2.55734850319616,0.580418477257168,1.13477044938228,0.622822248995575,0.75374599577023,1.0429658368404,0.65156653411535,0,0.736555271975129,0.632924774881769,0.633765858935825,0.212604299965044,0.419317291016752,0,0.150176892841506,0.16072558669708,0.570025487482497,0.19891667719909,0.547992461293902,3.51992488922645,2.73069305631066,1.77901850772711,0.853460445133014,2.80277190925209,1.72425731986345,3.30522436392431,0.954053754535364,0.569212969109448,1.76171156811282,2.29363936875137,0,1.68152568894461,0.263384084775077,1.7703879310245,3.93010762749165,3.49522548299166,1.83905144929746,4.56291173287027,0.946895611469467,1.94826728407911,1.11410456885174,2.3568472597987,1.77227115666897,2.70803863765016,0.896639238079726,1.95089021339817,0.164437904603676,0.829050053357545,0.289803085735052,2.81744470007915,1.33770414044857,0,0.566546713487831,3.06576394881537,1.71813722741315,0.759059076058509,1.59282707162048,3.25541726928209,1.90090408889675,0.451725357233318,1.53583933385302,0,2.60454977248419,2.46338399076314,3.62892137804518,2.67440195783507,3.18613688542158,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.886917589850256,0.087834785693126,0.785874452986276,2.5500670180478,1.48313777113772,0,0.174129737299267,0.531831842075461,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,1.52054421143703,0.488124115096339,0,0.81014194788176,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0,0,0,0.453728732640084,0,0,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,1.35282597214308,0.545492241181669,0.860413786167011,0.365921118388786,0,0.580969714347592,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.828147600278907,0.5057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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10519 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16920 | |||
|TSSclassifier=S | |||
|UniProt=Q99828 | |||
|association_with_transcript=0bp_to_ENST00000328649,NM_006384,uc002bpb.3_5end | |||
|description=CAGE_peak_4_at_CIB1_5end | |||
|id=chr15:90777277..90777301,- | |||
|ontology_enrichment_celltype=CL:0002087!3.02e-10!119;CL:0000838!4.37e-10!52;CL:0000542!1.75e-09!53;CL:0000051!1.75e-09!53;CL:0000791!1.47e-08!18;CL:0000789!1.47e-08!18;CL:0002420!1.47e-08!18;CL:0002419!1.47e-08!18;CL:0000790!1.47e-08!18;CL:0000084!1.65e-08!25;CL:0000827!1.65e-08!25;CL:0002031!1.87e-08!124;CL:0000738!1.95e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.32e-17;18!CL:0000789;8.32e-17;18!CL:0002419;8.32e-17;18!CL:0000084;4.02e-14;25!CL:0000625;4.05e-10;11!CL:0000624;6.26e-10;6!CL:0000542;8.86e-10;53!CL:1000507;4.92e-08;10!CL:1000494;4.92e-08;10!CL:0002202;4.35e-07;9!CL:0002632;4.35e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.59e-17,18;CL:0000789,1.59e-17,18;CL:0002420,1.59e-17,18;CL:0002419,1.59e-17,18;CL:0000790,1.59e-17,18;CL:0000838,1.99e-16,52;CL:0000542,6.09e-16,53;CL:0000051,6.09e-16,53;CL:0000084,1.70e-14,25;CL:0000827,1.70e-14,25;CL:0002087,1.03e-12,115;CL:0000738,2.14e-11,136;CL:0002031,4.89e-11,120;CL:0000625,1.20e-10,11;CL:0000624,3.80e-10,6;CL:1000507,1.97e-07,10;CL:1000494,1.97e-07,10;CL:0000037,2.36e-07,168;CL:0002202,4.94e-07,9;CL:0002632,4.94e-07,9;CL:0000988,8.78e-07,177;CL:0002032,9.28e-07,161;CL:0000837,9.28e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;8.32e-17;18!CL:0000051;8.86e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.92e-08;10!UBERON:0009773;4.92e-08;10!UBERON:0001231;4.92e-08;10!UBERON:0004810;4.92e-08;10!UBERON:0006554;2.08e-07;30!UBERON:0001008;2.08e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.97e-07,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,1.04474251279935,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.861847406537515,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0.687720651731561,0.246301768349837,0.314843125254717,0.786728553697808,1.53531759238885,1.08371286321253,3.67768489791571,2.71085326900425,2.21852406100073,0.0774672005803016,0.142169232487422,0.587200878669695,2.21598163412751,1.00272223735071,0.868043482863407,0.223915474239924,0.32389366601898,0,1.01778767145695,0.377875943688809,1.4555043671269,0.697287110717054,0.822335776043652,1.54853185447552,0.28769239232215,1.0246428261164,2.60130452877444,0.344745680736619,0,2.70852973188684,0.752969358170419,0.272906150057846,1.57306439111559,0.612167784741805,1.60464513538047,1.27867425159808,0.989553900560148,1.39624560335142,2.55734850319616,0.580418477257168,1.13477044938228,0.622822248995575,0.75374599577023,1.0429658368404,0.65156653411535,0,0.736555271975129,0.632924774881769,0.633765858935825,0.212604299965044,0.419317291016752,0,0.150176892841506,0.16072558669708,0.570025487482497,0.19891667719909,0.547992461293902,3.51992488922645,2.73069305631066,1.77901850772711,0.853460445133014,2.80277190925209,1.72425731986345,3.30522436392431,0.954053754535364,0.569212969109448,1.76171156811282,2.29363936875137,0,1.68152568894461,0.263384084775077,1.7703879310245,3.93010762749165,3.49522548299166,1.83905144929746,4.56291173287027,0.946895611469467,1.94826728407911,1.11410456885174,2.3568472597987,1.77227115666897,2.70803863765016,0.896639238079726,1.95089021339817,0.164437904603676,0.829050053357545,0.289803085735052,2.81744470007915,1.33770414044857,0,0.566546713487831,3.06576394881537,1.71813722741315,0.759059076058509,1.59282707162048,3.25541726928209,1.90090408889675,0.451725357233318,1.53583933385302,0,2.60454977248419,2.46338399076314,3.62892137804518,2.67440195783507,3.18613688542158,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.886917589850256,0.087834785693126,0.785874452986276,2.5500670180478,1.48313777113772,0,0.174129737299267,0.531831842075461,0.476981248610684,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,1.52054421143703,0.488124115096339,0,0.81014194788176,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0,0,0,0.453728732640084,0,0,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,1.35282597214308,0.545492241181669,0.860413786167011,0.365921118388786,0,0.580969714347592,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.828147600278907,0.505754070234305,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.943819157121151,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0.982827216677626,0,1.7658523976586,0.122988438543114,0.343135620597051,0.439001141634502,1.1240175325762,0.904760751704678,0.833296006426766,0,0,0,0.34779121492523,0.117408694235822,0.577465791044295,0,0.380508304469197,3.1608175918371,0,0.246217006087397,0.234004265139238,0.594524649154913,0.93733833986777,0.503946384596579,1.13420077793909,1.34337784054272,0.290633938513962,0.766765358330422,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0.87192013766656,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0.977208552881205,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0.112085143993527,2.56139988262505,4.09692392233083,2.31017465303547,0,0,0,0.502548796003046,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0.391602314925481,0.343143423810856,0.413536052245775,1.07857100409308,1.06727557803444,2.12189300012382,0,0,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,1.0877350463246,0.601519410909855,1.28913384510255,0.459257792658427,0,0,0.451199612907412,1.15523005656622,2.35304930753057,4.38417673959782,1.05551628892876,0,0,0.431831832204279,0,0.812839312631559,1.00337954770971,1.01950509218015,1.66215201785745,2.46262230194396,0.438519753291869,0,1.02580050046556,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.460511024178389,0.275673144969061,0,0.290033387828457,0,0.178064071293475,0.826424576804891,0.960950336825531,0.638063562472921,0.50578890427775,0,0,0.6970372701606,0.6160671603521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| |||
|short_description=p4@CIB1 | |||
}} |
Revision as of 08:51, 11 September 2013
Short description: | p4@CIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CIB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000328649, NM_006384, uc002bpb.3_5end |
EntrezGene: | CIB1 |
HGNC: | 16920 |
UniProt: | Q99828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.59e-17 | 18 |
alpha-beta T cell | 1.59e-17 | 18 |
immature T cell | 1.59e-17 | 18 |
mature T cell | 1.59e-17 | 18 |
immature alpha-beta T cell | 1.59e-17 | 18 |
lymphoid lineage restricted progenitor cell | 1.99e-16 | 52 |
lymphocyte | 6.09e-16 | 53 |
common lymphoid progenitor | 6.09e-16 | 53 |
T cell | 1.70e-14 | 25 |
pro-T cell | 1.70e-14 | 25 |
nongranular leukocyte | 1.03e-12 | 115 |
leukocyte | 2.14e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 4.89e-11 | 120 |
CD8-positive, alpha-beta T cell | 1.20e-10 | 11 |
CD4-positive, alpha-beta T cell | 3.80e-10 | 6 |
kidney tubule cell | 1.97e-07 | 10 |
nephron tubule epithelial cell | 1.97e-07 | 10 |
hematopoietic stem cell | 2.36e-07 | 168 |
epithelial cell of tracheobronchial tree | 4.94e-07 | 9 |
epithelial cell of lower respiratory tract | 4.94e-07 | 9 |
hematopoietic cell | 8.78e-07 | 177 |
hematopoietic oligopotent progenitor cell | 9.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.28e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.97e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.