FFCP PHASE1:Hg19::chr15:90346527..90346545,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C403|description=CAGE_peak_at_chr15:90346527..90346545,-|id=chr15:90346527..90346545,-|ontology_enrichment_celltype=CL:0000048!7.09e-19!430;CL:0000723!5.53e-18!436;CL:0000034!7.71e-17!444;CL:0002320!1.39e-13!365;CL:0002371!2.67e-13!591;CL:0000055!1.61e-12!180;CL:0000134!1.89e-12!358;CL:0000057!9.11e-12!75;CL:0002057!1.73e-11!42;CL:0002620!6.22e-11!23;CL:0000219!2.31e-10!390;CL:0000860!3.89e-10!45;CL:0000144!8.45e-10!625;CL:0000766!4.06e-08!76;CL:0002570!4.80e-08!8;CL:0002194!9.01e-08!63;CL:0000576!9.01e-08!63;CL:0000040!9.01e-08!63;CL:0000559!9.01e-08!63;CL:0000680!9.34e-08!57;CL:0000056!9.34e-08!57;CL:0000355!9.34e-08!57;CL:0000839!2.49e-07!70;CL:0002009!2.89e-07!65;CL:0000557!4.22e-07!71|ontology_enrichment_celltype_v019=CL:0000860;1.84e-14;33!CL:0002057;1.84e-14;33!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0002559;1.32e-12;5!CL:0000346;4.44e-12;3!CL:1000428;4.44e-12;3!CL:0002593;8.59e-09;2!CL:0002583;1.19e-08;2!CL:0000576;4.95e-07;48|ontology_enrichment_celltype_v019_2=CL:0002559,1.27e-12,5;CL:0000860,2.12e-12,42;CL:0002057,2.12e-12,42;CL:0000473,2.34e-12,48;CL:0000234,2.34e-12,48;CL:0000346,4.07e-12,3;CL:1000428,4.07e-12,3;CL:0002194,1.06e-10,59;CL:0000576,1.06e-10,59;CL:0000040,1.06e-10,59;CL:0000559,1.06e-10,59;CL:0002009,3.00e-10,61;CL:0000766,1.47e-09,72;CL:0000839,3.09e-09,66;CL:0000557,4.73e-09,67;CL:0002593,1.18e-08,2;CL:0002583,1.79e-08,2|ontology_enrichment_development_v019=CL:0002057;1.37e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!6.69e-13!167;UBERON:0002384!8.73e-13!375;UBERON:0004290!2.03e-11!70;UBERON:0000914!3.39e-11!83;UBERON:0002329!3.39e-11!83;UBERON:0003077!3.39e-11!83;UBERON:0003059!3.39e-11!83;UBERON:0007282!3.39e-11!83;UBERON:0009618!3.39e-11!83;UBERON:0007285!3.39e-11!83;UBERON:0002199!2.23e-10!45;UBERON:0002416!2.23e-10!45;UBERON:0002067!3.81e-09!9;UBERON:0004016!3.81e-09!9;UBERON:0010083!3.81e-09!9;UBERON:0002097!3.57e-08!40;UBERON:0000486!4.47e-08!82;UBERON:0000926!8.60e-08!448;UBERON:0004120!8.60e-08!448;UBERON:0006603!8.60e-08!448;UBERON:0005256!1.34e-07!143;UBERON:0002371!2.75e-07!80;UBERON:0002385!4.88e-07!63;UBERON:0001015!4.88e-07!63;UBERON:0000383!4.88e-07!63|ontology_enrichment_uberon_v019=UBERON:0002073;1.32e-12;5!UBERON:0000412;4.44e-12;3!UBERON:0001992;4.44e-12;3!UBERON:0002456;8.59e-09;2!UBERON:0002108;3.77e-08;4!UBERON:0002072;2.48e-07;5!UBERON:0002067;7.47e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.27e-12,5;UBERON:0005086,1.27e-12,5;UBERON:0000412,4.07e-12,3;UBERON:0001992,4.07e-12,3;UBERON:0002456,1.18e-08,2;UBERON:0002108,3.79e-08,4;UBERON:0002371,1.29e-07,76;UBERON:0002199,1.82e-07,46;UBERON:0002416,1.82e-07,46;UBERON:0002072,3.31e-07,5;UBERON:0002204,3.58e-07,167;UBERON:0004765,5.95e-07,90;UBERON:0001474,7.75e-07,82;UBERON:0002067,8.92e-07,9;UBERON:0004016,8.92e-07,9;UBERON:0010083,8.92e-07,9|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0,0,0.74259811776028,0,1.34465029290355,0.602694528023977,0,0,0,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,1.59938062657521,0.377875943688809,0.485168122375632,2.32429036905685,0.822335776043652,1.23882548358041,2.01384674625505,1.5369642391746,0.47296445977717,1.37898272294647,0,0,2.07066573496865,0.545812300115692,0.449446968890169,0.918251677112708,0,0,1.9791078011203,1.59570926097305,0.852449501065388,1.45104619314292,0,2.4912889959823,1.00499466102697,0,0.217188844705117,1.81619850790011,0,0,0,0.212604299965044,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,1.06366368415092,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.454072282934794,0.576175924479999,0,0.312160076830321,0.570471821544449,1.04614076386261,0.587172493218824,0.647491777472526,0.561803226808994,0.204154171254893,0.368502951935304,0.619954687054593,0,0.494533858557114,0,1.43723628363248,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0,0,1.25572744982203,0.85422955527427,0,0.300091096084402,1.03052529238439,0.772921620136887,1.30281799432113,0.506328996723799,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0.928735856063958,2.16563844500876,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90346527..90346545,- | |||
|id=chr15:90346527..90346545,- | |||
|ontology_enrichment_celltype=CL:0000048!7.09e-19!430;CL:0000723!5.53e-18!436;CL:0000034!7.71e-17!444;CL:0002320!1.39e-13!365;CL:0002371!2.67e-13!591;CL:0000055!1.61e-12!180;CL:0000134!1.89e-12!358;CL:0000057!9.11e-12!75;CL:0002057!1.73e-11!42;CL:0002620!6.22e-11!23;CL:0000219!2.31e-10!390;CL:0000860!3.89e-10!45;CL:0000144!8.45e-10!625;CL:0000766!4.06e-08!76;CL:0002570!4.80e-08!8;CL:0002194!9.01e-08!63;CL:0000576!9.01e-08!63;CL:0000040!9.01e-08!63;CL:0000559!9.01e-08!63;CL:0000680!9.34e-08!57;CL:0000056!9.34e-08!57;CL:0000355!9.34e-08!57;CL:0000839!2.49e-07!70;CL:0002009!2.89e-07!65;CL:0000557!4.22e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-14;33!CL:0002057;1.84e-14;33!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0002559;1.32e-12;5!CL:0000346;4.44e-12;3!CL:1000428;4.44e-12;3!CL:0002593;8.59e-09;2!CL:0002583;1.19e-08;2!CL:0000576;4.95e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.27e-12,5;CL:0000860,2.12e-12,42;CL:0002057,2.12e-12,42;CL:0000473,2.34e-12,48;CL:0000234,2.34e-12,48;CL:0000346,4.07e-12,3;CL:1000428,4.07e-12,3;CL:0002194,1.06e-10,59;CL:0000576,1.06e-10,59;CL:0000040,1.06e-10,59;CL:0000559,1.06e-10,59;CL:0002009,3.00e-10,61;CL:0000766,1.47e-09,72;CL:0000839,3.09e-09,66;CL:0000557,4.73e-09,67;CL:0002593,1.18e-08,2;CL:0002583,1.79e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.69e-13!167;UBERON:0002384!8.73e-13!375;UBERON:0004290!2.03e-11!70;UBERON:0000914!3.39e-11!83;UBERON:0002329!3.39e-11!83;UBERON:0003077!3.39e-11!83;UBERON:0003059!3.39e-11!83;UBERON:0007282!3.39e-11!83;UBERON:0009618!3.39e-11!83;UBERON:0007285!3.39e-11!83;UBERON:0002199!2.23e-10!45;UBERON:0002416!2.23e-10!45;UBERON:0002067!3.81e-09!9;UBERON:0004016!3.81e-09!9;UBERON:0010083!3.81e-09!9;UBERON:0002097!3.57e-08!40;UBERON:0000486!4.47e-08!82;UBERON:0000926!8.60e-08!448;UBERON:0004120!8.60e-08!448;UBERON:0006603!8.60e-08!448;UBERON:0005256!1.34e-07!143;UBERON:0002371!2.75e-07!80;UBERON:0002385!4.88e-07!63;UBERON:0001015!4.88e-07!63;UBERON:0000383!4.88e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.32e-12;5!UBERON:0000412;4.44e-12;3!UBERON:0001992;4.44e-12;3!UBERON:0002456;8.59e-09;2!UBERON:0002108;3.77e-08;4!UBERON:0002072;2.48e-07;5!UBERON:0002067;7.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.27e-12,5;UBERON:0005086,1.27e-12,5;UBERON:0000412,4.07e-12,3;UBERON:0001992,4.07e-12,3;UBERON:0002456,1.18e-08,2;UBERON:0002108,3.79e-08,4;UBERON:0002371,1.29e-07,76;UBERON:0002199,1.82e-07,46;UBERON:0002416,1.82e-07,46;UBERON:0002072,3.31e-07,5;UBERON:0002204,3.58e-07,167;UBERON:0004765,5.95e-07,90;UBERON:0001474,7.75e-07,82;UBERON:0002067,8.92e-07,9;UBERON:0004016,8.92e-07,9;UBERON:0010083,8.92e-07,9 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,1.26343974685366,0.522371256399677,0,0,0,0,0.74259811776028,0,1.34465029290355,0.602694528023977,0,0,0,0.612002073732759,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,1.59938062657521,0.377875943688809,0.485168122375632,2.32429036905685,0.822335776043652,1.23882548358041,2.01384674625505,1.5369642391746,0.47296445977717,1.37898272294647,0,0,2.07066573496865,0.545812300115692,0.449446968890169,0.918251677112708,0,0,1.9791078011203,1.59570926097305,0.852449501065388,1.45104619314292,0,2.4912889959823,1.00499466102697,0,0.217188844705117,1.81619850790011,0,0,0,0.212604299965044,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,1.06366368415092,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,1.43418310374407,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.454072282934794,0.576175924479999,0,0.312160076830321,0.570471821544449,1.04614076386261,0.587172493218824,0.647491777472526,0.561803226808994,0.204154171254893,0.368502951935304,0.619954687054593,0,0.494533858557114,0,1.43723628363248,0.168336113954066,0.375355559615893,0.554128230968366,0,0,0,0,1.25572744982203,0.85422955527427,0,0.300091096084402,1.03052529238439,0.772921620136887,1.30281799432113,0.506328996723799,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.5867062865676,0,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.579125226670317,1.84928690295345,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0.49076596687656,2.00068208423871,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0.553107505625109,1.39013783148933,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,2.00472601943452,1.24293207719189,0.164254312027618,3.11552657510173,1.39452454151951,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0,0,0,0,0,0,0,0.850468526382578,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.48335359146061,0,0.307007349452259,0.137836572484531,0.322260734604821,0.290033387828457,0.681813019328807,0,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,3.16950440270266,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,1.15755106853338,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85760885457012,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,2.93928624098468,0,0,0.681552087141687,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0.74627401443437,0.233713309847224,1.10961172300523,0.189403005275089,0.251567901752575,0,0,0.453692771289717,0.466311601748341,1.33069634990671,0.477890301491107,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0.727394636810238,0,0.464033759878494,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.08521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| |||
|short_description=p@chr15:90346527..90346545,- | |||
}} |
Revision as of 08:48, 11 September 2013
Short description: | p@chr15:90346527..90346545, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:90346527..90346545, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.27e-12 | 5 |
classical monocyte | 2.12e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-12 | 42 |
defensive cell | 2.34e-12 | 48 |
phagocyte | 2.34e-12 | 48 |
hair follicle dermal papilla cell | 4.07e-12 | 3 |
stem cell of epidermis | 4.07e-12 | 3 |
monopoietic cell | 1.06e-10 | 59 |
monocyte | 1.06e-10 | 59 |
monoblast | 1.06e-10 | 59 |
promonocyte | 1.06e-10 | 59 |
macrophage dendritic cell progenitor | 3.00e-10 | 61 |
myeloid leukocyte | 1.47e-09 | 72 |
myeloid lineage restricted progenitor cell | 3.09e-09 | 66 |
granulocyte monocyte progenitor cell | 4.73e-09 | 67 |
smooth muscle cell of the internal thoracic artery | 1.18e-08 | 2 |
subcutaneous preadipocyte | 1.79e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.27e-12 | 5 |
hair follicle placode | 1.27e-12 | 5 |
dermal papilla | 4.07e-12 | 3 |
papillary layer of dermis | 4.07e-12 | 3 |
internal thoracic artery | 1.18e-08 | 2 |
small intestine | 3.79e-08 | 4 |
bone marrow | 1.29e-07 | 76 |
integument | 1.82e-07 | 46 |
integumental system | 1.82e-07 | 46 |
hypodermis | 3.31e-07 | 5 |
musculoskeletal system | 3.58e-07 | 167 |
skeletal element | 5.95e-07 | 90 |
bone element | 7.75e-07 | 82 |
dermis | 8.92e-07 | 9 |
dermatome | 8.92e-07 | 9 |
future dermis | 8.92e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.