FFCP PHASE1:Hg19::chr15:78915186..78915188,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78915186..78915188,-|id=chr15:78915186..78915188,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;2.34e-32;5!CL:0000123;3.44e-21;2!CL:0000242;3.44e-21;2!CL:0000047;5.69e-21;2!CL:0002321;1.49e-11;15!CL:0000312;2.63e-09;5!CL:0000240;5.73e-08;6!CL:0000311;5.73e-08;6!CL:0000079;5.73e-08;6!CL:0000237;5.73e-08;6!CL:0002319;6.92e-07;25|ontology_enrichment_celltype_v019_2=CL:0000242,3.11e-21,2;CL:0000133,4.65e-11,59;CL:0000312,2.53e-09,5;CL:0000221,3.13e-09,72;CL:0000333,4.09e-09,41;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6;CL:0002319,7.03e-07,25|ontology_enrichment_development_v019=CL:0000357;5.73e-08;6!CL:0000114;5.73e-08;6!CL:0000133;1.47e-07;59|ontology_enrichment_disease=DOID:169!9.46e-11!6|ontology_enrichment_disease_v019=DOID:169;3.55e-27;6!DOID:171;8.81e-17;10!DOID:3095;3.39e-08;22!DOID:2994;3.39e-08;22|ontology_enrichment_disease_v019_2=DOID:169,3.11e-27,6;DOID:171,8.13e-17,10;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22|ontology_enrichment_uberon=UBERON:0000013!8.38e-13!5;UBERON:0002410!8.38e-13!5;UBERON:0004913!1.18e-07!1;UBERON:0003703!1.18e-07!1;UBERON:0001174!1.18e-07!1;UBERON:0004914!1.18e-07!1;UBERON:0002363!1.87e-07!1;UBERON:0007647!1.87e-07!1;UBERON:0010115!1.87e-07!1;UBERON:0000010!2.60e-07!8;UBERON:0002370!4.16e-07!4;UBERON:0005058!4.16e-07!4;UBERON:0009113!4.16e-07!4;UBERON:0003295!4.16e-07!4;UBERON:0005562!4.16e-07!4|ontology_enrichment_uberon_v019=UBERON:0000013;2.34e-32;5!UBERON:0002410;2.34e-32;5!UBERON:0000010;1.61e-18;8!UBERON:0001052;2.66e-11;4!UBERON:0004907;2.63e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.99e-32,5;UBERON:0002410,1.99e-32,5;UBERON:0000010,1.48e-18,8;UBERON:0001052,2.80e-11,4;UBERON:0004907,2.74e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81000943484129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53473245564382,0.431299245586727,0,1.96577348745625,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:78915186..78915188,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:78915186..78915188,- | |||
|id=chr15:78915186..78915188,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.34e-32;5!CL:0000123;3.44e-21;2!CL:0000242;3.44e-21;2!CL:0000047;5.69e-21;2!CL:0002321;1.49e-11;15!CL:0000312;2.63e-09;5!CL:0000240;5.73e-08;6!CL:0000311;5.73e-08;6!CL:0000079;5.73e-08;6!CL:0000237;5.73e-08;6!CL:0002319;6.92e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.11e-21,2;CL:0000133,4.65e-11,59;CL:0000312,2.53e-09,5;CL:0000221,3.13e-09,72;CL:0000333,4.09e-09,41;CL:0000240,5.54e-08,6;CL:0000311,5.54e-08,6;CL:0000079,5.54e-08,6;CL:0000237,5.54e-08,6;CL:0000036,5.54e-08,6;CL:0000357,5.54e-08,6;CL:0000114,5.54e-08,6;CL:0002319,7.03e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;5.73e-08;6!CL:0000114;5.73e-08;6!CL:0000133;1.47e-07;59 | |||
|ontology_enrichment_disease=DOID:169!9.46e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:169;3.55e-27;6!DOID:171;8.81e-17;10!DOID:3095;3.39e-08;22!DOID:2994;3.39e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.11e-27,6;DOID:171,8.13e-17,10;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!8.38e-13!5;UBERON:0002410!8.38e-13!5;UBERON:0004913!1.18e-07!1;UBERON:0003703!1.18e-07!1;UBERON:0001174!1.18e-07!1;UBERON:0004914!1.18e-07!1;UBERON:0002363!1.87e-07!1;UBERON:0007647!1.87e-07!1;UBERON:0010115!1.87e-07!1;UBERON:0000010!2.60e-07!8;UBERON:0002370!4.16e-07!4;UBERON:0005058!4.16e-07!4;UBERON:0009113!4.16e-07!4;UBERON:0003295!4.16e-07!4;UBERON:0005562!4.16e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.34e-32;5!UBERON:0002410;2.34e-32;5!UBERON:0000010;1.61e-18;8!UBERON:0001052;2.66e-11;4!UBERON:0004907;2.63e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.99e-32,5;UBERON:0002410,1.99e-32,5;UBERON:0000010,1.48e-18,8;UBERON:0001052,2.80e-11,4;UBERON:0004907,2.74e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81000943484129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53473245564382,0.431299245586727,0,1.96577348745625,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0,0,0,0,0,0,2.73947616152849,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:78915186..78915188,- | |||
}} |
Revision as of 08:25, 11 September 2013
Short description: | p@chr15:78915186..78915188, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78915186..78915188, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.11e-21 | 2 |
neurectodermal cell | 4.65e-11 | 59 |
keratinocyte | 2.53e-09 | 5 |
ectodermal cell | 3.13e-09 | 72 |
migratory neural crest cell | 4.09e-09 | 41 |
stratified squamous epithelial cell | 5.54e-08 | 6 |
keratin accumulating cell | 5.54e-08 | 6 |
stratified epithelial cell | 5.54e-08 | 6 |
keratinizing barrier epithelial cell | 5.54e-08 | 6 |
epithelial fate stem cell | 5.54e-08 | 6 |
stratified epithelial stem cell | 5.54e-08 | 6 |
surface ectodermal cell | 5.54e-08 | 6 |
neural cell | 7.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.99e-32 | 5 |
autonomic nervous system | 1.99e-32 | 5 |
peripheral nervous system | 1.48e-18 | 8 |
rectum | 2.80e-11 | 4 |
lower digestive tract | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.11e-27 | 6 |
neuroectodermal tumor | 8.13e-17 | 10 |
germ cell and embryonal cancer | 3.27e-08 | 22 |
germ cell cancer | 3.27e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.