FFCP PHASE1:Hg19::chr15:57592185..57592201,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283663|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-361bp_to_ENST00000501726,NR_024433,uc010ugs.1,uc010ugt.1_5end|coexpression_cluster_id=C47|description=CAGE_peak_1_at_LOC283663_5end|id=chr15:57592185..57592201,+|ontology_enrichment_celltype=CL:0000037!1.25e-43!172;CL:0000566!1.25e-43!172;CL:0002032!7.83e-41!165;CL:0000837!7.83e-41!165;CL:0000988!2.05e-40!182;CL:0000945!1.52e-37!24;CL:0000826!1.52e-37!24;CL:0000236!2.20e-32!14;CL:0002087!1.38e-31!119;CL:0002031!6.50e-30!124;CL:0000738!1.72e-26!140;CL:0000763!1.52e-23!112;CL:0000049!1.52e-23!112;CL:0000838!3.21e-16!52;CL:0000542!8.25e-16!53;CL:0000051!8.25e-16!53;CL:0000839!1.84e-14!70;CL:0002194!9.75e-14!63;CL:0000576!9.75e-14!63;CL:0000040!9.75e-14!63;CL:0000559!9.75e-14!63;CL:0002057!9.82e-14!42;CL:0000134!3.00e-13!358;CL:0002009!3.76e-13!65;CL:0002320!1.02e-12!365;CL:0000860!1.56e-12!45;CL:0000766!1.30e-11!76;CL:0000557!1.36e-11!71;CL:0000219!7.60e-11!390;CL:0000048!1.25e-08!430;CL:0000034!1.81e-08!444;CL:0000723!2.55e-08!436|ontology_enrichment_celltype_v019=CL:0000236;9.72e-80;13!CL:0000945;1.83e-42;24!CL:0000542;2.98e-15;53|ontology_enrichment_celltype_v019_2=CL:0000236,5.04e-74,14;CL:0000945,1.62e-42,24;CL:0000826,1.62e-42,24;CL:0002032,1.58e-20,161;CL:0000837,1.58e-20,161;CL:0000037,1.53e-19,168;CL:0000838,1.05e-18,52;CL:0000988,2.18e-18,177;CL:0000542,2.56e-18,53;CL:0000051,2.56e-18,53;CL:0002087,1.64e-10,115;CL:0002031,5.51e-10,120;CL:0000738,1.47e-08,136;CL:0000134,1.62e-07,354;CL:0002320,2.65e-07,361|ontology_enrichment_development_v019=CL:0000051;2.98e-15;53|ontology_enrichment_disease=DOID:8692!1.00e-18!31;DOID:2531!9.44e-18!51;DOID:0060083!9.44e-18!51;DOID:1240!5.04e-16!39|ontology_enrichment_disease_v019=DOID:8692;6.01e-16;31!DOID:1240;5.99e-10;39|ontology_enrichment_disease_v019_2=DOID:8692,5.53e-17,31;DOID:1240,2.70e-13,39;DOID:2531,6.31e-10,51;DOID:0060083,6.31e-10,51|ontology_enrichment_uberon=UBERON:0002390!4.55e-17!102;UBERON:0003061!4.55e-17!102;UBERON:0002193!5.21e-16!112;UBERON:0002384!5.44e-12!375;UBERON:0002371!7.04e-11!80;UBERON:0002405!5.57e-10!115;UBERON:0001474!9.66e-10!86;UBERON:0002106!2.58e-08!3;UBERON:0004854!2.58e-08!3;UBERON:0009034!2.58e-08!3;UBERON:0002095!2.58e-08!3;UBERON:0004782!2.58e-08!3;UBERON:0003281!2.58e-08!3;UBERON:0009664!2.58e-08!3;UBERON:0002296!2.58e-08!3;UBERON:0005602!2.58e-08!3;UBERON:0001179!2.58e-08!3;UBERON:0006293!2.58e-08!3;UBERON:0004765!1.62e-07!101;UBERON:0001434!1.62e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.19e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0.284338464974843,0.880801318004542,1.10799081706375,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0.929716147622738,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,1.24564449799115,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,3.51992488922645,5.46138611262132,6.22656477704488,1.70692089026603,5.20514783146816,6.8970292794538,3.30522436392431,3.81621501814146,15.9379631350646,9.39579502993502,5.73409842187843,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19115887728894,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,2.48956981172077,0,0.649243880549111,0.280797178113459,0.228234679033192,2.97691801968744,0,0.338583555603207,7.38705145477018,7.66838887325981,3.40676990152261,2.74804275804612,0.307240764308458,0.223676107892416,0.500547425135725,12.1140619149265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,1.53471711068062,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-361bp_to_ENST00000501726,NR_024433,uc010ugs.1,uc010ugt.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_LOC283663_5end | |||
|id=chr15:57592185..57592201,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.25e-43!172;CL:0000566!1.25e-43!172;CL:0002032!7.83e-41!165;CL:0000837!7.83e-41!165;CL:0000988!2.05e-40!182;CL:0000945!1.52e-37!24;CL:0000826!1.52e-37!24;CL:0000236!2.20e-32!14;CL:0002087!1.38e-31!119;CL:0002031!6.50e-30!124;CL:0000738!1.72e-26!140;CL:0000763!1.52e-23!112;CL:0000049!1.52e-23!112;CL:0000838!3.21e-16!52;CL:0000542!8.25e-16!53;CL:0000051!8.25e-16!53;CL:0000839!1.84e-14!70;CL:0002194!9.75e-14!63;CL:0000576!9.75e-14!63;CL:0000040!9.75e-14!63;CL:0000559!9.75e-14!63;CL:0002057!9.82e-14!42;CL:0000134!3.00e-13!358;CL:0002009!3.76e-13!65;CL:0002320!1.02e-12!365;CL:0000860!1.56e-12!45;CL:0000766!1.30e-11!76;CL:0000557!1.36e-11!71;CL:0000219!7.60e-11!390;CL:0000048!1.25e-08!430;CL:0000034!1.81e-08!444;CL:0000723!2.55e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.72e-80;13!CL:0000945;1.83e-42;24!CL:0000542;2.98e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.04e-74,14;CL:0000945,1.62e-42,24;CL:0000826,1.62e-42,24;CL:0002032,1.58e-20,161;CL:0000837,1.58e-20,161;CL:0000037,1.53e-19,168;CL:0000838,1.05e-18,52;CL:0000988,2.18e-18,177;CL:0000542,2.56e-18,53;CL:0000051,2.56e-18,53;CL:0002087,1.64e-10,115;CL:0002031,5.51e-10,120;CL:0000738,1.47e-08,136;CL:0000134,1.62e-07,354;CL:0002320,2.65e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;2.98e-15;53 | |||
|ontology_enrichment_disease=DOID:8692!1.00e-18!31;DOID:2531!9.44e-18!51;DOID:0060083!9.44e-18!51;DOID:1240!5.04e-16!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.01e-16;31!DOID:1240;5.99e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.53e-17,31;DOID:1240,2.70e-13,39;DOID:2531,6.31e-10,51;DOID:0060083,6.31e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.55e-17!102;UBERON:0003061!4.55e-17!102;UBERON:0002193!5.21e-16!112;UBERON:0002384!5.44e-12!375;UBERON:0002371!7.04e-11!80;UBERON:0002405!5.57e-10!115;UBERON:0001474!9.66e-10!86;UBERON:0002106!2.58e-08!3;UBERON:0004854!2.58e-08!3;UBERON:0009034!2.58e-08!3;UBERON:0002095!2.58e-08!3;UBERON:0004782!2.58e-08!3;UBERON:0003281!2.58e-08!3;UBERON:0009664!2.58e-08!3;UBERON:0002296!2.58e-08!3;UBERON:0005602!2.58e-08!3;UBERON:0001179!2.58e-08!3;UBERON:0006293!2.58e-08!3;UBERON:0004765!1.62e-07!101;UBERON:0001434!1.62e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.19e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0.284338464974843,0.880801318004542,1.10799081706375,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0.929716147622738,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,1.24564449799115,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,3.51992488922645,5.46138611262132,6.22656477704488,1.70692089026603,5.20514783146816,6.8970292794538,3.30522436392431,3.81621501814146,15.9379631350646,9.39579502993502,5.73409842187843,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19115887728894,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,2.48956981172077,0,0.649243880549111,0.280797178113459,0.228234679033192,2.97691801968744,0,0.338583555603207,7.38705145477018,7.66838887325981,3.40676990152261,2.74804275804612,0.307240764308458,0.223676107892416,0.500547425135725,12.1140619149265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,1.53471711068062,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.26940821205835,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@LOC283663 | |||
}} |
Revision as of 07:34, 11 September 2013
Short description: | p1@LOC283663 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC283663_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -361bp_to_ENST00000501726, NR_024433, uc010ugs.1, uc010ugt.1_5end |
EntrezGene: | LOC283663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.04e-74 | 14 |
lymphocyte of B lineage | 1.62e-42 | 24 |
pro-B cell | 1.62e-42 | 24 |
hematopoietic oligopotent progenitor cell | 1.58e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-20 | 161 |
hematopoietic stem cell | 1.53e-19 | 168 |
lymphoid lineage restricted progenitor cell | 1.05e-18 | 52 |
hematopoietic cell | 2.18e-18 | 177 |
lymphocyte | 2.56e-18 | 53 |
common lymphoid progenitor | 2.56e-18 | 53 |
nongranular leukocyte | 1.64e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.51e-10 | 120 |
leukocyte | 1.47e-08 | 136 |
mesenchymal cell | 1.62e-07 | 354 |
connective tissue cell | 2.65e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.19e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.53e-17 | 31 |
leukemia | 2.70e-13 | 39 |
hematologic cancer | 6.31e-10 | 51 |
immune system cancer | 6.31e-10 | 51 |
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