FFCP PHASE1:Hg19::chr15:48936886..48936898,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2200|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3603|TSSclassifier=S|UniProt=|association_with_transcript=130bp_to_ENST00000558230_5end|coexpression_cluster_id=C834|description=CAGE_peak_13_at_FBN1_5end|id=chr15:48936886..48936898,-|ontology_enrichment_celltype=CL:0000055!7.41e-21!180;CL:0000057!1.20e-17!75;CL:0002620!1.25e-11!23;CL:0000048!4.53e-11!430;CL:0000723!2.16e-10!436;CL:0000034!1.57e-09!444;CL:0000136!5.44e-09!15;CL:0002371!1.33e-07!591;CL:0002494!3.11e-07!16;CL:0002334!3.81e-07!12;CL:0000680!5.10e-07!57;CL:0000056!5.10e-07!57;CL:0000355!5.10e-07!57|ontology_enrichment_celltype_v019=CL:0000153;2.02e-09;9!CL:0000447;2.02e-09;9!CL:0002548;1.33e-08;6!CL:0000057;2.01e-08;73!CL:1000306;4.41e-08;4!CL:0002547;4.41e-08;4!CL:0002620;6.78e-08;23|ontology_enrichment_celltype_v019_2=CL:0000057,5.45e-22,76;CL:0000048,1.39e-09,427;CL:0000153,1.79e-09,9;CL:0000447,1.79e-09,9;CL:0000723,2.75e-09,433;CL:0000034,6.67e-09,441;CL:0000134,9.72e-09,354;CL:0002548,2.03e-08,6;CL:0002320,2.28e-08,361;CL:1000306,5.40e-08,4;CL:0002547,5.40e-08,4;CL:0002620,5.94e-08,23;CL:0000219,4.52e-07,386|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.15e-09!27;UBERON:0004923!1.25e-09!57;UBERON:0000948!2.90e-09!24;UBERON:0005498!2.90e-09!24;UBERON:0004140!2.90e-09!24;UBERON:0009881!2.90e-09!24;UBERON:0004141!2.90e-09!24;UBERON:0003084!2.90e-09!24;UBERON:0007005!2.90e-09!24;UBERON:0004139!2.90e-09!24;UBERON:0004291!2.90e-09!24;UBERON:0004457!3.59e-08!12;UBERON:0000042!3.59e-08!12;UBERON:0002199!2.10e-07!45;UBERON:0002416!2.10e-07!45;UBERON:0000914!2.36e-07!83;UBERON:0002329!2.36e-07!83;UBERON:0003077!2.36e-07!83;UBERON:0003059!2.36e-07!83;UBERON:0007282!2.36e-07!83;UBERON:0009618!2.36e-07!83;UBERON:0007285!2.36e-07!83;UBERON:0004872!2.92e-07!84;UBERON:0004290!4.10e-07!70;UBERON:0002385!7.68e-07!63;UBERON:0001015!7.68e-07!63;UBERON:0000383!7.68e-07!63;UBERON:0001013!7.85e-07!14;UBERON:0001134!8.76e-07!61;UBERON:0002036!8.76e-07!61;UBERON:0003082!8.76e-07!61|ontology_enrichment_uberon_v019=UBERON:0004457;1.74e-09;9!UBERON:0000042;1.74e-09;9!UBERON:0004797;4.41e-08;4!UBERON:0000415;4.41e-08;4!UBERON:0007240;4.41e-08;4!UBERON:0005742;4.41e-08;4!UBERON:0005734;4.41e-08;4!UBERON:0004664;4.41e-08;4!UBERON:0004663;4.41e-08;4!UBERON:0005406;2.87e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.92e-10,66;UBERON:0000415,5.40e-08,4;UBERON:0007240,5.40e-08,4;UBERON:0005742,5.40e-08,4;UBERON:0005734,5.40e-08,4;UBERON:0004664,5.40e-08,4;UBERON:0004663,5.40e-08,4;UBERON:0002384,7.29e-08,371;UBERON:0005406,1.16e-07,2;UBERON:0004457,5.80e-07,12;UBERON:0000042,5.80e-07,12|phase1_expression=0.726713517082227,2.78330681058278,0.563817616383885,3.00219895059391,2.68176656656373,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,0,0.527533956456907,0.37129905888014,0,0,0,0,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0,0.502170558379211,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,2.00535164254356,1.30361867064741,0,2.91980922181582,0.0945348171640679,1.33037638477538,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,1.45650098894541,5.16305917347865,1.06400514659507,1.68203280042692,1.06748995729705,0.49333509683432,0,1.0776853765575,1.14423332179421,0.302714855289863,2.30470369792,0,0,0,0.448346041655403,0.23486899728753,1.13311061057692,0.561803226808994,0,0.122834317311768,0,1.18800285728205,1.97813543422845,0,0,0,0,0,0,1.5324389789951,1.05166641234618,0,1.97328599257748,0.640672166455702,0.423863802319124,2.70081986475962,0.618315175430633,1.28820270022815,0.558350568994769,0.337552664482532,0.292311015483596,3.02920529092937,0.736399189138395,1.77810662500693,2.4850671476163,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.646358578788889,0,0,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0.710783897485092,1.58390374586686,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,1.15825045334063,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,1.24900292158013,0.473107245101804,1.05427273493442,0.902838299183157,0,0,0.664225598535437,0.737476674166813,0.434418072340414,0.195801157462741,0,0,0,0,0,0,1.20956117331872,0.744323423456331,1.2276957863045,2.80660094433074,0.640695746278505,0.51170724906670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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=130bp_to_ENST00000558230_5end | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_13_at_FBN1_5end | |||
|id=chr15:48936886..48936898,- | |||
|ontology_enrichment_celltype=CL:0000055!7.41e-21!180;CL:0000057!1.20e-17!75;CL:0002620!1.25e-11!23;CL:0000048!4.53e-11!430;CL:0000723!2.16e-10!436;CL:0000034!1.57e-09!444;CL:0000136!5.44e-09!15;CL:0002371!1.33e-07!591;CL:0002494!3.11e-07!16;CL:0002334!3.81e-07!12;CL:0000680!5.10e-07!57;CL:0000056!5.10e-07!57;CL:0000355!5.10e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.02e-09;9!CL:0000447;2.02e-09;9!CL:0002548;1.33e-08;6!CL:0000057;2.01e-08;73!CL:1000306;4.41e-08;4!CL:0002547;4.41e-08;4!CL:0002620;6.78e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.45e-22,76;CL:0000048,1.39e-09,427;CL:0000153,1.79e-09,9;CL:0000447,1.79e-09,9;CL:0000723,2.75e-09,433;CL:0000034,6.67e-09,441;CL:0000134,9.72e-09,354;CL:0002548,2.03e-08,6;CL:0002320,2.28e-08,361;CL:1000306,5.40e-08,4;CL:0002547,5.40e-08,4;CL:0002620,5.94e-08,23;CL:0000219,4.52e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.15e-09!27;UBERON:0004923!1.25e-09!57;UBERON:0000948!2.90e-09!24;UBERON:0005498!2.90e-09!24;UBERON:0004140!2.90e-09!24;UBERON:0009881!2.90e-09!24;UBERON:0004141!2.90e-09!24;UBERON:0003084!2.90e-09!24;UBERON:0007005!2.90e-09!24;UBERON:0004139!2.90e-09!24;UBERON:0004291!2.90e-09!24;UBERON:0004457!3.59e-08!12;UBERON:0000042!3.59e-08!12;UBERON:0002199!2.10e-07!45;UBERON:0002416!2.10e-07!45;UBERON:0000914!2.36e-07!83;UBERON:0002329!2.36e-07!83;UBERON:0003077!2.36e-07!83;UBERON:0003059!2.36e-07!83;UBERON:0007282!2.36e-07!83;UBERON:0009618!2.36e-07!83;UBERON:0007285!2.36e-07!83;UBERON:0004872!2.92e-07!84;UBERON:0004290!4.10e-07!70;UBERON:0002385!7.68e-07!63;UBERON:0001015!7.68e-07!63;UBERON:0000383!7.68e-07!63;UBERON:0001013!7.85e-07!14;UBERON:0001134!8.76e-07!61;UBERON:0002036!8.76e-07!61;UBERON:0003082!8.76e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.74e-09;9!UBERON:0000042;1.74e-09;9!UBERON:0004797;4.41e-08;4!UBERON:0000415;4.41e-08;4!UBERON:0007240;4.41e-08;4!UBERON:0005742;4.41e-08;4!UBERON:0005734;4.41e-08;4!UBERON:0004664;4.41e-08;4!UBERON:0004663;4.41e-08;4!UBERON:0005406;2.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.92e-10,66;UBERON:0000415,5.40e-08,4;UBERON:0007240,5.40e-08,4;UBERON:0005742,5.40e-08,4;UBERON:0005734,5.40e-08,4;UBERON:0004664,5.40e-08,4;UBERON:0004663,5.40e-08,4;UBERON:0002384,7.29e-08,371;UBERON:0005406,1.16e-07,2;UBERON:0004457,5.80e-07,12;UBERON:0000042,5.80e-07,12 | |||
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| |||
|short_description=p13@FBN1 | |||
}} |
Revision as of 07:16, 11 September 2013
Short description: | p13@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_FBN1_5end |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | 130bp_to_ENST00000558230_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.45e-22 | 76 |
multi fate stem cell | 1.39e-09 | 427 |
GAG secreting cell | 1.79e-09 | 9 |
carbohydrate secreting cell | 1.79e-09 | 9 |
somatic stem cell | 2.75e-09 | 433 |
stem cell | 6.67e-09 | 441 |
mesenchymal cell | 9.72e-09 | 354 |
cardiac fibroblast | 2.03e-08 | 6 |
connective tissue cell | 2.28e-08 | 361 |
fibroblast of tunica adventitia of artery | 5.40e-08 | 4 |
fibroblast of the aortic adventitia | 5.40e-08 | 4 |
skin fibroblast | 5.94e-08 | 23 |
motile cell | 4.52e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 2.92e-10 | 66 |
artery wall | 5.40e-08 | 4 |
tunica adventitia of artery | 5.40e-08 | 4 |
adventitia | 5.40e-08 | 4 |
tunica adventitia of blood vessel | 5.40e-08 | 4 |
aorta tunica adventitia | 5.40e-08 | 4 |
aorta wall | 5.40e-08 | 4 |
connective tissue | 7.29e-08 | 371 |
perirenal fat | 1.16e-07 | 2 |
cavity lining | 5.80e-07 | 12 |
serous membrane | 5.80e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.