FFCP PHASE1:Hg19::chr15:45879564..45879584,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26258|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8549|TSSclassifier=W|UniProt=Q9UL45,B3KY40|association_with_transcript=147bp_to_ENST00000220531,NM_012388,uc001zvq.2,uc001zvr.2_5end|coexpression_cluster_id=C3494|description=CAGE_peak_1_at_PLDN_5end|id=chr15:45879564..45879584,+|ontology_enrichment_celltype=CL:0000738!5.46e-38!140;CL:0000037!4.38e-34!172;CL:0000566!4.38e-34!172;CL:0002031!5.26e-32!124;CL:0002032!6.39e-32!165;CL:0000837!6.39e-32!165;CL:0000988!1.07e-31!182;CL:0002087!2.42e-29!119;CL:0000766!1.07e-26!76;CL:0000557!1.45e-23!71;CL:0000839!3.28e-23!70;CL:0002057!1.15e-22!42;CL:0000763!1.64e-22!112;CL:0000049!1.64e-22!112;CL:0002009!1.36e-20!65;CL:0002194!7.50e-20!63;CL:0000576!7.50e-20!63;CL:0000040!7.50e-20!63;CL:0000559!7.50e-20!63;CL:0000860!2.09e-19!45;CL:0000134!4.72e-13!358;CL:0002320!3.50e-12!365;CL:0000048!8.93e-11!430;CL:0000219!3.22e-10!390;CL:0000723!8.12e-10!436;CL:0000034!2.95e-09!444;CL:0000838!9.39e-09!52;CL:0000542!9.44e-09!53;CL:0000051!9.44e-09!53|ontology_enrichment_celltype_v019=CL:0000860;9.31e-19;33!CL:0002057;9.31e-19;33!CL:0000473;3.58e-15;39!CL:0000234;3.58e-15;39!CL:0000576;5.57e-14;48!CL:0000766;2.02e-12;69!CL:0002087;1.64e-09;104!CL:0000738;5.70e-09;136!CL:0000763;6.19e-07;100|ontology_enrichment_celltype_v019_2=CL:0000738,6.36e-40,136;CL:0000037,1.34e-35,168;CL:0002031,7.02e-34,120;CL:0000988,8.86e-34,177;CL:0002032,2.06e-33,161;CL:0000837,2.06e-33,161;CL:0002087,3.72e-31,115;CL:0000766,3.98e-29,72;CL:0000557,6.87e-26,67;CL:0000839,1.55e-25,66;CL:0000763,4.58e-24,108;CL:0000049,4.58e-24,108;CL:0002009,7.76e-23,61;CL:0000860,1.15e-22,42;CL:0002057,1.15e-22,42;CL:0002194,4.36e-22,59;CL:0000576,4.36e-22,59;CL:0000040,4.36e-22,59;CL:0000559,4.36e-22,59;CL:0000473,4.99e-22,48;CL:0000234,4.99e-22,48;CL:0000134,4.43e-14,354;CL:0002320,3.65e-13,361;CL:0000048,8.71e-12,427;CL:0000219,4.36e-11,386;CL:0000723,8.95e-11,433;CL:0000034,3.51e-10,441;CL:0000838,9.39e-09,52;CL:0000542,9.44e-09,53;CL:0000051,9.44e-09,53|ontology_enrichment_development_v019=CL:0002057;1.16e-16;42!CL:0000049;8.05e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.17e-27!102;UBERON:0003061!1.17e-27!102;UBERON:0002193!7.49e-24!112;UBERON:0002371!2.14e-21!80;UBERON:0001474!2.00e-20!86;UBERON:0004765!1.51e-18!101;UBERON:0001434!1.51e-18!101;UBERON:0002405!1.09e-12!115;UBERON:0002384!2.08e-12!375;UBERON:0002204!3.50e-10!167;UBERON:0000178!3.76e-09!15;UBERON:0000179!3.76e-09!15;UBERON:0000463!3.76e-09!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.75e-09;15!UBERON:0000179;3.75e-09;15!UBERON:0000463;3.75e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.27e-29,98;UBERON:0003061,1.27e-29,98;UBERON:0002193,1.77e-25,108;UBERON:0002371,2.38e-23,76;UBERON:0001474,3.35e-22,82;UBERON:0004765,5.60e-21,90;UBERON:0001434,2.17e-19,100;UBERON:0002405,2.92e-18,93;UBERON:0002384,2.16e-13,371;UBERON:0002204,9.35e-11,167;UBERON:0000178,3.76e-09,15;UBERON:0000179,3.76e-09,15;UBERON:0000463,3.76e-09,15|phase1_expression=31.0670028552652,17.9844440068426,34.9566922158008,22.0161256376887,24.5828601935008,22.6808016266096,10.1319951267324,16.4247167090976,8.88031135879451,5.6518805395347,0.697801167972428,7.8638893966862,5.01157258634062,22.0304108268883,15.2442792834841,22.1867298329086,21.6970030088632,26.2911632539454,20.0052447504108,10.7115320526805,8.36402834101437,3.76145665773705,23.4713509447466,14.23494020758,18.7058532996256,14.3657202806148,14.5318043326404,15.5060239187948,27.1421351025744,79.8365148042202,46.2900208715067,8.27479102031034,4.51808878167375,10.7228662948368,25.951512194401,28.8603541949466,31.1216465694938,60.9394949385065,68.1851121398482,55.7717937739739,30.0046735481499,27.2070679455943,26.272707898687,33.0054002029612,46.8566170174124,46.5761397480607,52.296533303779,71.1320446277759,64.7286315170766,178.081590847411,189.815083538064,216.144758118167,90.3233683529941,101.986580006245,97.5070703479261,46.4958578670234,47.2127639600073,66.2934279113,66.7262885368568,80.2322567690234,69.6877467120955,163.606244892611,144.012760802818,150.883561688574,49.0453613282307,65.8166860641722,57.9224691565885,182.657779641652,183.561987283911,221.966999288629,50.853558221203,79.9162470093015,74.3686610486078,33.1670799509749,33.8040836944419,28.3039171436307,31.5643453521651,37.5442232103766,47.0925969022445,18.2408155994399,25.2624180042844,26.3036381421073,40.4791362261042,38.7758413996113,43.5859534393142,35.4186084730201,42.8423706128533,39.0831659169049,31.7301538936734,32.4378276542024,52.3675931580693,44.0427892028204,46.2550606031527,40.973111859498,59.4139076760428,22.6510312906566,90.0930747121355,47.9473130553981,39.2698863089063,25.5795337947737,35.8514493296949,28.406868344084,17.534405556712,27.4069723937527,37.4149502493043,35.8884909225466,49.0154993414678,19.4698805983026,19.248783438862,16.4437904603676,19.0681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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8549 | |||
|TSSclassifier=W | |||
|UniProt=Q9UL45,B3KY40 | |||
|association_with_transcript=147bp_to_ENST00000220531,NM_012388,uc001zvq.2,uc001zvr.2_5end | |||
|coexpression_cluster_id=C3494 | |||
|description=CAGE_peak_1_at_PLDN_5end | |||
|id=chr15:45879564..45879584,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.46e-38!140;CL:0000037!4.38e-34!172;CL:0000566!4.38e-34!172;CL:0002031!5.26e-32!124;CL:0002032!6.39e-32!165;CL:0000837!6.39e-32!165;CL:0000988!1.07e-31!182;CL:0002087!2.42e-29!119;CL:0000766!1.07e-26!76;CL:0000557!1.45e-23!71;CL:0000839!3.28e-23!70;CL:0002057!1.15e-22!42;CL:0000763!1.64e-22!112;CL:0000049!1.64e-22!112;CL:0002009!1.36e-20!65;CL:0002194!7.50e-20!63;CL:0000576!7.50e-20!63;CL:0000040!7.50e-20!63;CL:0000559!7.50e-20!63;CL:0000860!2.09e-19!45;CL:0000134!4.72e-13!358;CL:0002320!3.50e-12!365;CL:0000048!8.93e-11!430;CL:0000219!3.22e-10!390;CL:0000723!8.12e-10!436;CL:0000034!2.95e-09!444;CL:0000838!9.39e-09!52;CL:0000542!9.44e-09!53;CL:0000051!9.44e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.31e-19;33!CL:0002057;9.31e-19;33!CL:0000473;3.58e-15;39!CL:0000234;3.58e-15;39!CL:0000576;5.57e-14;48!CL:0000766;2.02e-12;69!CL:0002087;1.64e-09;104!CL:0000738;5.70e-09;136!CL:0000763;6.19e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.36e-40,136;CL:0000037,1.34e-35,168;CL:0002031,7.02e-34,120;CL:0000988,8.86e-34,177;CL:0002032,2.06e-33,161;CL:0000837,2.06e-33,161;CL:0002087,3.72e-31,115;CL:0000766,3.98e-29,72;CL:0000557,6.87e-26,67;CL:0000839,1.55e-25,66;CL:0000763,4.58e-24,108;CL:0000049,4.58e-24,108;CL:0002009,7.76e-23,61;CL:0000860,1.15e-22,42;CL:0002057,1.15e-22,42;CL:0002194,4.36e-22,59;CL:0000576,4.36e-22,59;CL:0000040,4.36e-22,59;CL:0000559,4.36e-22,59;CL:0000473,4.99e-22,48;CL:0000234,4.99e-22,48;CL:0000134,4.43e-14,354;CL:0002320,3.65e-13,361;CL:0000048,8.71e-12,427;CL:0000219,4.36e-11,386;CL:0000723,8.95e-11,433;CL:0000034,3.51e-10,441;CL:0000838,9.39e-09,52;CL:0000542,9.44e-09,53;CL:0000051,9.44e-09,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-16;42!CL:0000049;8.05e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@PLDN | |||
}} |
Revision as of 07:12, 11 September 2013
Short description: | p1@PLDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLDN_5end |
Coexpression cluster: | C3494_CD14_Dendritic_Eosinophils_Mast_Whole_Neutrophils_CD4 |
Association with transcript: | 147bp_to_ENST00000220531, NM_012388, uc001zvq.2, uc001zvr.2_5end |
EntrezGene: | PLDN |
HGNC: | 8549 |
UniProt: | Q9UL45B3KY40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.27e-29 | 98 |
blood island | 1.27e-29 | 98 |
hemolymphoid system | 1.77e-25 | 108 |
bone marrow | 2.38e-23 | 76 |
bone element | 3.35e-22 | 82 |
skeletal element | 5.60e-21 | 90 |
skeletal system | 2.17e-19 | 100 |
immune system | 2.92e-18 | 93 |
connective tissue | 2.16e-13 | 371 |
musculoskeletal system | 9.35e-11 | 167 |
blood | 3.76e-09 | 15 |
haemolymphatic fluid | 3.76e-09 | 15 |
organism substance | 3.76e-09 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.