FFCP PHASE1:Hg19::chr15:45007715..45007729,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=567|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=914|TSSclassifier=S|UniProt=|association_with_transcript=-194bp_to_ENST00000560556_5end|coexpression_cluster_id=C13|description=CAGE_peak_8_at_B2M_5end|id=chr15:45007715..45007729,+|ontology_enrichment_celltype=CL:0000738!6.94e-38!140;CL:0002031!1.51e-32!124;CL:0002087!2.50e-32!119;CL:0000037!2.62e-27!172;CL:0000566!2.62e-27!172;CL:0002032!1.34e-26!165;CL:0000837!1.34e-26!165;CL:0000766!5.79e-26!76;CL:0000988!1.28e-24!182;CL:0002009!8.79e-24!65;CL:0002194!4.23e-23!63;CL:0000576!4.23e-23!63;CL:0000040!4.23e-23!63;CL:0000559!4.23e-23!63;CL:0002057!1.66e-22!42;CL:0000557!2.40e-22!71;CL:0000860!5.14e-22!45;CL:0000839!6.60e-22!70;CL:0000763!1.26e-16!112;CL:0000049!1.26e-16!112;CL:0000838!3.85e-10!52;CL:0000542!1.48e-09!53;CL:0000051!1.48e-09!53;CL:0000134!1.12e-08!358;CL:0000791!3.63e-08!18;CL:0000789!3.63e-08!18;CL:0002420!3.63e-08!18;CL:0002419!3.63e-08!18;CL:0000790!3.63e-08!18;CL:0002320!3.75e-08!365;CL:0000084!1.17e-07!25;CL:0000827!1.17e-07!25|ontology_enrichment_celltype_v019=CL:0000473;8.71e-31;39!CL:0000234;8.71e-31;39!CL:0000860;2.33e-29;33!CL:0002057;2.33e-29;33!CL:0000576;4.80e-24;48!CL:0000766;3.47e-19;69!CL:0000738;6.45e-13;136!CL:0002087;1.39e-10;104!CL:0000763;4.52e-09;100!CL:0000791;5.95e-09;18!CL:0000789;5.95e-09;18!CL:0002419;5.95e-09;18!CL:0000235;1.38e-08;6!CL:0000084;2.23e-07;25!CL:0000219;5.82e-07;193!CL:0000988;7.53e-07;177!CL:0000451;8.27e-07;10|ontology_enrichment_celltype_v019_2=CL:0000738,1.15e-51,136;CL:0000766,6.91e-46,72;CL:0002087,1.55e-45,115;CL:0002194,7.02e-44,59;CL:0000576,7.02e-44,59;CL:0000040,7.02e-44,59;CL:0000559,7.02e-44,59;CL:0000473,8.98e-44,48;CL:0000234,8.98e-44,48;CL:0002009,1.17e-43,61;CL:0002031,1.70e-42,120;CL:0000557,1.18e-39,67;CL:0000839,7.42e-39,66;CL:0000037,4.19e-37,168;CL:0000860,1.78e-36,42;CL:0002057,1.78e-36,42;CL:0002032,1.26e-35,161;CL:0000837,1.26e-35,161;CL:0000988,9.60e-35,177;CL:0000763,1.86e-28,108;CL:0000049,1.86e-28,108;CL:0000134,1.87e-10,354;CL:0002320,9.57e-10,361;CL:0000791,3.93e-09,18;CL:0000789,3.93e-09,18;CL:0002420,3.93e-09,18;CL:0002419,3.93e-09,18;CL:0000790,3.93e-09,18;CL:0000235,9.64e-09,6;CL:0000838,1.73e-07,52;CL:0000084,1.78e-07,25;CL:0000827,1.78e-07,25;CL:0000219,2.42e-07,386;CL:0000542,3.18e-07,53;CL:0000051,3.18e-07,53;CL:0000048,5.28e-07,427|ontology_enrichment_development_v019=CL:0002057;4.23e-26;42!CL:0000049;2.17e-09;108!CL:0000790;5.95e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.64e-27!112;UBERON:0002390!5.55e-27!102;UBERON:0003061!5.55e-27!102;UBERON:0002371!1.43e-21!80;UBERON:0001474!7.07e-19!86;UBERON:0002405!1.25e-16!115;UBERON:0004765!1.62e-15!101;UBERON:0001434!1.62e-15!101;UBERON:0002204!9.09e-10!167;UBERON:0002384!1.82e-08!375;UBERON:0003081!6.51e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;7.86e-09;15!UBERON:0000179;7.86e-09;15!UBERON:0000463;7.86e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.39e-44,98;UBERON:0003061,5.39e-44,98;UBERON:0002193,5.90e-42,108;UBERON:0002371,1.75e-37,76;UBERON:0002405,1.06e-33,93;UBERON:0001474,2.53e-33,82;UBERON:0004765,1.14e-28,90;UBERON:0001434,4.19e-26,100;UBERON:0003081,1.64e-18,203;UBERON:0002204,1.09e-13,167;UBERON:0002384,1.17e-09,371;UBERON:0000178,6.80e-09,15;UBERON:0000179,6.80e-09,15;UBERON:0000463,6.80e-09,15;UBERON:0000926,5.94e-08,315;UBERON:0004120,5.94e-08,315;UBERON:0006603,5.94e-08,315|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.840547463227464,0.492603536699674,0.393553906568396,1.57345710739562,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0,0.568676929949686,0.293600439334847,0.553995408531877,0.601633342410425,1.51907609501096,1.34349284543955,2.26725566213286,2.31818010870768,3.92575244704825,0.755751887377619,2.91100873425379,3.48643555358527,3.28934310417461,1.85823822537062,8.34307937734236,3.84241059793651,2.12834006899727,3.44745680736619,2.5819387343353,1.35426486594342,4.70605848856512,3.27487380069415,2.9214052977861,7.65209730927256,0.641858054152187,3.83602275479425,5.27762080298746,3.78980949481101,5.11469700639233,3.48251086354301,5.10646702222026,1.86846674698672,6.78371396193207,9.90817544998383,3.9093992046921,4.84319602106695,2.20966581592539,2.84816148696796,1.47878700418359,2.12604299965044,2.30624510059213,1.57260083605093,2.10247649978109,1.44653028027372,1.71007646244749,1.79025009479181,1.64397738388171,0,0.546138611262131,1.77901850772711,1.28019066769952,2.40237592221607,2.29900975981793,2.64417949113945,2.86216126360609,1.1384259382189,1.17447437874188,0.382273228125229,2.64342657158052,0.560508562981536,0.790152254325231,0.196709770113833,2.35806457649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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=567 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=914 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-194bp_to_ENST00000560556_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_B2M_5end | |||
|id=chr15:45007715..45007729,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.94e-38!140;CL:0002031!1.51e-32!124;CL:0002087!2.50e-32!119;CL:0000037!2.62e-27!172;CL:0000566!2.62e-27!172;CL:0002032!1.34e-26!165;CL:0000837!1.34e-26!165;CL:0000766!5.79e-26!76;CL:0000988!1.28e-24!182;CL:0002009!8.79e-24!65;CL:0002194!4.23e-23!63;CL:0000576!4.23e-23!63;CL:0000040!4.23e-23!63;CL:0000559!4.23e-23!63;CL:0002057!1.66e-22!42;CL:0000557!2.40e-22!71;CL:0000860!5.14e-22!45;CL:0000839!6.60e-22!70;CL:0000763!1.26e-16!112;CL:0000049!1.26e-16!112;CL:0000838!3.85e-10!52;CL:0000542!1.48e-09!53;CL:0000051!1.48e-09!53;CL:0000134!1.12e-08!358;CL:0000791!3.63e-08!18;CL:0000789!3.63e-08!18;CL:0002420!3.63e-08!18;CL:0002419!3.63e-08!18;CL:0000790!3.63e-08!18;CL:0002320!3.75e-08!365;CL:0000084!1.17e-07!25;CL:0000827!1.17e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.71e-31;39!CL:0000234;8.71e-31;39!CL:0000860;2.33e-29;33!CL:0002057;2.33e-29;33!CL:0000576;4.80e-24;48!CL:0000766;3.47e-19;69!CL:0000738;6.45e-13;136!CL:0002087;1.39e-10;104!CL:0000763;4.52e-09;100!CL:0000791;5.95e-09;18!CL:0000789;5.95e-09;18!CL:0002419;5.95e-09;18!CL:0000235;1.38e-08;6!CL:0000084;2.23e-07;25!CL:0000219;5.82e-07;193!CL:0000988;7.53e-07;177!CL:0000451;8.27e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.15e-51,136;CL:0000766,6.91e-46,72;CL:0002087,1.55e-45,115;CL:0002194,7.02e-44,59;CL:0000576,7.02e-44,59;CL:0000040,7.02e-44,59;CL:0000559,7.02e-44,59;CL:0000473,8.98e-44,48;CL:0000234,8.98e-44,48;CL:0002009,1.17e-43,61;CL:0002031,1.70e-42,120;CL:0000557,1.18e-39,67;CL:0000839,7.42e-39,66;CL:0000037,4.19e-37,168;CL:0000860,1.78e-36,42;CL:0002057,1.78e-36,42;CL:0002032,1.26e-35,161;CL:0000837,1.26e-35,161;CL:0000988,9.60e-35,177;CL:0000763,1.86e-28,108;CL:0000049,1.86e-28,108;CL:0000134,1.87e-10,354;CL:0002320,9.57e-10,361;CL:0000791,3.93e-09,18;CL:0000789,3.93e-09,18;CL:0002420,3.93e-09,18;CL:0002419,3.93e-09,18;CL:0000790,3.93e-09,18;CL:0000235,9.64e-09,6;CL:0000838,1.73e-07,52;CL:0000084,1.78e-07,25;CL:0000827,1.78e-07,25;CL:0000219,2.42e-07,386;CL:0000542,3.18e-07,53;CL:0000051,3.18e-07,53;CL:0000048,5.28e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-26;42!CL:0000049;2.17e-09;108!CL:0000790;5.95e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.64e-27!112;UBERON:0002390!5.55e-27!102;UBERON:0003061!5.55e-27!102;UBERON:0002371!1.43e-21!80;UBERON:0001474!7.07e-19!86;UBERON:0002405!1.25e-16!115;UBERON:0004765!1.62e-15!101;UBERON:0001434!1.62e-15!101;UBERON:0002204!9.09e-10!167;UBERON:0002384!1.82e-08!375;UBERON:0003081!6.51e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.86e-09;15!UBERON:0000179;7.86e-09;15!UBERON:0000463;7.86e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.39e-44,98;UBERON:0003061,5.39e-44,98;UBERON:0002193,5.90e-42,108;UBERON:0002371,1.75e-37,76;UBERON:0002405,1.06e-33,93;UBERON:0001474,2.53e-33,82;UBERON:0004765,1.14e-28,90;UBERON:0001434,4.19e-26,100;UBERON:0003081,1.64e-18,203;UBERON:0002204,1.09e-13,167;UBERON:0002384,1.17e-09,371;UBERON:0000178,6.80e-09,15;UBERON:0000179,6.80e-09,15;UBERON:0000463,6.80e-09,15;UBERON:0000926,5.94e-08,315;UBERON:0004120,5.94e-08,315;UBERON:0006603,5.94e-08,315 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.840547463227464,0.492603536699674,0.393553906568396,1.57345710739562,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0,0.568676929949686,0.293600439334847,0.553995408531877,0.601633342410425,1.51907609501096,1.34349284543955,2.26725566213286,2.31818010870768,3.92575244704825,0.755751887377619,2.91100873425379,3.48643555358527,3.28934310417461,1.85823822537062,8.34307937734236,3.84241059793651,2.12834006899727,3.44745680736619,2.5819387343353,1.35426486594342,4.70605848856512,3.27487380069415,2.9214052977861,7.65209730927256,0.641858054152187,3.83602275479425,5.27762080298746,3.78980949481101,5.11469700639233,3.48251086354301,5.10646702222026,1.86846674698672,6.78371396193207,9.90817544998383,3.9093992046921,4.84319602106695,2.20966581592539,2.84816148696796,1.47878700418359,2.12604299965044,2.30624510059213,1.57260083605093,2.10247649978109,1.44653028027372,1.71007646244749,1.79025009479181,1.64397738388171,0,0.546138611262131,1.77901850772711,1.28019066769952,2.40237592221607,2.29900975981793,2.64417949113945,2.86216126360609,1.1384259382189,1.17447437874188,0.382273228125229,2.64342657158052,0.560508562981536,0.790152254325231,0.196709770113833,2.35806457649499,2.46721798799411,2.50779743086017,2.28145586643513,1.89379122293893,1.94826728407911,3.45372416344038,3.24066498222321,1.77227115666897,1.62482318259009,4.99556146930133,5.07231455483525,3.78207180588455,1.93445012450094,0.869409257205157,1.77943875794473,1.87278579662799,3.1360657141493,1.92625882585863,2.29932296161153,4.81078423675682,4.04831507231205,2.22995790026868,3.25541726928209,1.90090408889675,0.752875595388864,1.15187950038977,2.49861453104692,1.89421801635213,0.821127996921047,0.80642697289893,2.94184215361858,2.89648807765598,0,0.670700859703636,0.12786256184353,0,2.00535164254356,0.289693037921647,0,0.973269740605272,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0.370784442784429,1.29818957461873,1.21890816109487,2.12732736830184,1.43094374583205,1.14398982156026,1.85728750664782,0,0.860234595106124,0,0,0,0.275118041940067,0.626984899610432,0.775250277507987,1.06729878806013,0.66944122552934,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0,0.357198913136319,0,0,0,0,0,3.9534125230819,3.87780264148325,0,4.47274756525787,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0.448346041655403,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,2.37600571456411,0.741800787835671,0,0,0,0,0,0,0.612975591598039,1.35214253015937,0.340296549480063,0.179389635688862,0.640672166455702,0,0,0.309157587715317,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0.773043412653187,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0.709840800239063,1.01150814046861,0.241011029883482,1.10293972732394,0.871517776369625,0.474541238222193,0.943819157121151,0.392442930250692,1.53898862778556,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0.402115889646523,0,0,0,0,0,0,0.721832238805369,3.24089858803628,0.761016608938393,0,0,2.70838706696137,2.80805118167085,2.67536092119711,0,0.335964256397719,0.425325291727159,0,0,0.383382679165211,0.492663237895943,0.44024217006613,0.621984346622316,1.29707958075265,0,0,0,0,0,0.616964956219941,0.600686115687835,0,0,0.43596006883328,0.1466765716419,0,0,1.690605505112,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0.65147236858747,0.355391948742546,0,0,0,0.299918973546171,7.29742683847143,6.52934218861764,14.7583757638122,0,0,1.42636905040718,0.868687840005475,0,0.358121926479791,0.784596007954691,0.591092280605782,0.862510299438069,1.79680250791648,0,0,0,0.167516265334349,0.637938751653163,14.9801404789436,44.8742188806037,7.0450637284126,0.24538298343828,0.500170521059677,0.271265023699736,0.415941723061614,0.713715955188647,0.630809660135739,0.585707074963566,0,0,0,0,0.368738337083406,0.347534457872331,0,0,0.206768026122887,1.94142780736755,1.17400313583789,0,0,0,0.496215615637554,0,0.561320188866147,0.512556597022804,0,0.482561763430822,0,0.462629081407967,0.887808626565635,0.246381468041427,0,0.813472649219715,0.241718899183244,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0.510281115829547,0.863663664408557,0,0,0,0,0.831076008928724,0,0.219259876645935,0.261435451024901,0.256450125116389,0.328014645699706,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0,0,0,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.290033387828457,0.340906509664404,0.26709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| |||
|short_description=p8@B2M | |||
}} |
Revision as of 07:08, 11 September 2013
Short description: | p8@B2M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_B2M_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -194bp_to_ENST00000560556_5end |
EntrezGene: | B2M |
HGNC: | 914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.39e-44 | 98 |
blood island | 5.39e-44 | 98 |
hemolymphoid system | 5.90e-42 | 108 |
bone marrow | 1.75e-37 | 76 |
immune system | 1.06e-33 | 93 |
bone element | 2.53e-33 | 82 |
skeletal element | 1.14e-28 | 90 |
skeletal system | 4.19e-26 | 100 |
lateral plate mesoderm | 1.64e-18 | 203 |
musculoskeletal system | 1.09e-13 | 167 |
connective tissue | 1.17e-09 | 371 |
blood | 6.80e-09 | 15 |
haemolymphatic fluid | 6.80e-09 | 15 |
organism substance | 6.80e-09 | 15 |
mesoderm | 5.94e-08 | 315 |
mesoderm-derived structure | 5.94e-08 | 315 |
presumptive mesoderm | 5.94e-08 | 315 |
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