FFCP PHASE1:Hg19::chr15:35087070..35087134,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=70|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=143|TSSclassifier=S|UniProt=P68032|association_with_transcript=-61bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end|coexpression_cluster_id=C20|description=CAGE_peak_2_at_ACTC1_5end|id=chr15:35087070..35087134,-|ontology_enrichment_celltype=CL:0000188!9.15e-10!9|ontology_enrichment_celltype_v019=CL:0002580;7.88e-10;3!CL:0000515;1.09e-09;3!CL:0002620;1.50e-08;23!CL:0002334;5.17e-08;12!CL:0000056;2.38e-07;4!CL:0000680;7.68e-07;7!CL:0002617;9.41e-07;2|ontology_enrichment_celltype_v019_2=CL:0002580,8.48e-10,3;CL:0002620,1.44e-08,23;CL:0002334,5.48e-08,12;CL:0000515,2.35e-07,4;CL:0002617,9.55e-07,2|ontology_enrichment_development_v019=UBERON:0005062;1.27e-07;4!UBERON:0007284;1.27e-07;4!CL:0000515;2.38e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.47e-07;2|ontology_enrichment_disease_v019_2=DOID:114,1.47e-07,2|ontology_enrichment_uberon=UBERON:0007023!3.89e-17!115;UBERON:0003688!5.23e-07!6;UBERON:0002358!5.23e-07!6;UBERON:0003684!5.23e-07!6;UBERON:0001178!5.23e-07!6|ontology_enrichment_uberon_v019=UBERON:0001134;1.28e-12;16!UBERON:0002036;1.28e-12;16!UBERON:0004457;2.30e-10;9!UBERON:0000042;2.30e-10;9!UBERON:0004151;3.49e-10;3!UBERON:0003978;4.63e-10;3!UBERON:0000946;4.63e-10;3!UBERON:0007100;1.35e-08;25!UBERON:0006947;2.55e-08;3!UBERON:0004054;2.55e-08;3!UBERON:0003688;1.00e-07;6!UBERON:0002358;1.00e-07;6!UBERON:0003684;1.00e-07;6!UBERON:0001178;1.00e-07;6!UBERON:0002081;2.95e-07;2!UBERON:0000310;3.07e-07;10!UBERON:0002133;3.69e-07;2!UBERON:0002385;4.68e-07;31!UBERON:0001015;4.68e-07;31!UBERON:0000383;4.68e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.49e-10,3;UBERON:0003978,4.57e-10,3;UBERON:0009751,4.57e-10,3;UBERON:0000946,4.57e-10,3;UBERON:0002523,4.57e-10,3;UBERON:0005983,4.57e-10,3;UBERON:0002165,4.57e-10,3;UBERON:0002062,4.57e-10,3;UBERON:0007280,4.57e-10,3;UBERON:0007023,4.83e-10,114;UBERON:0006947,2.36e-08,3;UBERON:0004054,2.36e-08,3;UBERON:0007100,7.97e-08,27;UBERON:0003688,1.06e-07,6;UBERON:0002358,1.06e-07,6;UBERON:0003684,1.06e-07,6;UBERON:0001178,1.06e-07,6;UBERON:0004457,1.35e-07,12;UBERON:0000042,1.35e-07,12;UBERON:0002081,2.95e-07,2;UBERON:0010227,2.95e-07,2;UBERON:0000310,3.19e-07,10;UBERON:0002133,3.64e-07,2|phase1_expression=4.72363786103447,8.99222200342129,4.79244973926302,8.00586386825043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,7.89314397030993,0,0,0.600182192168805,0,6.1833729610951,5.95573940261087,9.28269827326964,33.1285817548075,2.52433774244115,0.460249493211497,0,11.005297368015,16.9263525022436,1.86516651541536,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8720671467415,6.36976599906189,22.0244984785072,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,7.20601190002797,0,0,0,0,0,0,7.19512642674453,31.7666284706289,15.436305193819,1.28139149255701,9.72243773226737,0.804269605718038,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60816110269676,0.325378394664303,0.515205058238611,0,0,0,0,0,3.963499449977,0.154048617114644,0.614014698904518,1.51620229732984,0.107420244868274,0.580066775656914,2.13066568540252,7.83481913691289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,1.64647446479951,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,5.97743964753209,0.276283915531148,0,0,0,0,0,0,0,25.252711843055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,1.76985594558733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,2.76209081994573,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.26085721434945,0,2.71176888936639,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9011569043248,60.9566727871078,12.2038414178058,90.853945227041,267.83705403722,139.035817986287,31.9793329036817,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,39.3082429505352,82.0994043253135,0,0,0,0,0,9.686917448422,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=70 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=143 | |||
|TSSclassifier=S | |||
|UniProt=P68032 | |||
|association_with_transcript=-61bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_ACTC1_5end | |||
|id=chr15:35087070..35087134,- | |||
|ontology_enrichment_celltype=CL:0000188!9.15e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002580;7.88e-10;3!CL:0000515;1.09e-09;3!CL:0002620;1.50e-08;23!CL:0002334;5.17e-08;12!CL:0000056;2.38e-07;4!CL:0000680;7.68e-07;7!CL:0002617;9.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,8.48e-10,3;CL:0002620,1.44e-08,23;CL:0002334,5.48e-08,12;CL:0000515,2.35e-07,4;CL:0002617,9.55e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.27e-07;4!UBERON:0007284;1.27e-07;4!CL:0000515;2.38e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.47e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.47e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-17!115;UBERON:0003688!5.23e-07!6;UBERON:0002358!5.23e-07!6;UBERON:0003684!5.23e-07!6;UBERON:0001178!5.23e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.28e-12;16!UBERON:0002036;1.28e-12;16!UBERON:0004457;2.30e-10;9!UBERON:0000042;2.30e-10;9!UBERON:0004151;3.49e-10;3!UBERON:0003978;4.63e-10;3!UBERON:0000946;4.63e-10;3!UBERON:0007100;1.35e-08;25!UBERON:0006947;2.55e-08;3!UBERON:0004054;2.55e-08;3!UBERON:0003688;1.00e-07;6!UBERON:0002358;1.00e-07;6!UBERON:0003684;1.00e-07;6!UBERON:0001178;1.00e-07;6!UBERON:0002081;2.95e-07;2!UBERON:0000310;3.07e-07;10!UBERON:0002133;3.69e-07;2!UBERON:0002385;4.68e-07;31!UBERON:0001015;4.68e-07;31!UBERON:0000383;4.68e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.49e-10,3;UBERON:0003978,4.57e-10,3;UBERON:0009751,4.57e-10,3;UBERON:0000946,4.57e-10,3;UBERON:0002523,4.57e-10,3;UBERON:0005983,4.57e-10,3;UBERON:0002165,4.57e-10,3;UBERON:0002062,4.57e-10,3;UBERON:0007280,4.57e-10,3;UBERON:0007023,4.83e-10,114;UBERON:0006947,2.36e-08,3;UBERON:0004054,2.36e-08,3;UBERON:0007100,7.97e-08,27;UBERON:0003688,1.06e-07,6;UBERON:0002358,1.06e-07,6;UBERON:0003684,1.06e-07,6;UBERON:0001178,1.06e-07,6;UBERON:0004457,1.35e-07,12;UBERON:0000042,1.35e-07,12;UBERON:0002081,2.95e-07,2;UBERON:0010227,2.95e-07,2;UBERON:0000310,3.19e-07,10;UBERON:0002133,3.64e-07,2 | |||
|phase1_expression=4.72363786103447,8.99222200342129,4.79244973926302,8.00586386825043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,7.89314397030993,0,0,0.600182192168805,0,6.1833729610951,5.95573940261087,9.28269827326964,33.1285817548075,2.52433774244115,0.460249493211497,0,11.005297368015,16.9263525022436,1.86516651541536,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8720671467415,6.36976599906189,22.0244984785072,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,7.20601190002797,0,0,0,0,0,0,7.19512642674453,31.7666284706289,15.436305193819,1.28139149255701,9.72243773226737,0.804269605718038,1.48418066444991,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60816110269676,0.325378394664303,0.515205058238611,0,0,0,0,0,3.963499449977,0.154048617114644,0.614014698904518,1.51620229732984,0.107420244868274,0.580066775656914,2.13066568540252,7.83481913691289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,1.64647446479951,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,5.97743964753209,0.276283915531148,0,0,0,0,0,0,0,25.252711843055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,1.76985594558733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,2.76209081994573,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.26085721434945,0,2.71176888936639,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9011569043248,60.9566727871078,12.2038414178058,90.853945227041,267.83705403722,139.035817986287,31.9793329036817,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,39.3082429505352,82.0994043253135,0,0,0,0,0,9.686917448422,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.4044701107677,0.343395705182793,0.673498977531838,5.04739592914604,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,4.96211178389294,0,0,1.07140367175657,1.00885116665647,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,29.7488821903448,0,0,0,0.431855182437243,0,2.64463213453628,0,0,5.73732298598512,0,0,0,0,0.430227358820278,0,0.0852134047591577,1.69354820076372,0,0,0,0,0,0,0,3.4905354331124,2.3196288626764,6.79995390282795,0,0,0,0,0,0,0.154348316215889,0,0,52.4617408553358,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,2.31087814315709,0.432626562123789,0,0,0.380095503034311,0.101988829741982,0,0,0,0.454672189309436,0,0,0,6.18378547512845,2.61870874610114,0,0.0620747142958579,0,0,0.202117188958219,3.04803447055746,1.71116650542641,0.134704106029175,0.430333232356058,7.98384855710432,0,0,0,0,32.8497319364836,0.122241444182866,0.406896178315738,2.66302709674205,0.603821380773079,0 | |||
|short_description=p2@ACTC1 | |||
}} |
Revision as of 06:42, 11 September 2013
Short description: | p2@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ACTC1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -61bp_to_AB590199, CR541795, CU679551, DQ893096, DQ896369_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | P68032 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 8.48e-10 | 3 |
skin fibroblast | 1.44e-08 | 23 |
preadipocyte | 5.48e-08 | 12 |
skeletal muscle myoblast | 2.35e-07 | 4 |
adipocyte of breast | 9.55e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.49e-10 | 3 |
valve | 4.57e-10 | 3 |
cardiac mesenchyme | 4.57e-10 | 3 |
cardial valve | 4.57e-10 | 3 |
tunica intima | 4.57e-10 | 3 |
heart layer | 4.57e-10 | 3 |
endocardium | 4.57e-10 | 3 |
endocardial cushion | 4.57e-10 | 3 |
presumptive endocardium | 4.57e-10 | 3 |
adult organism | 4.83e-10 | 114 |
male genital duct | 2.36e-08 | 3 |
internal male genitalia | 2.36e-08 | 3 |
primary circulatory organ | 7.97e-08 | 27 |
omentum | 1.06e-07 | 6 |
peritoneum | 1.06e-07 | 6 |
abdominal cavity | 1.06e-07 | 6 |
visceral peritoneum | 1.06e-07 | 6 |
cavity lining | 1.35e-07 | 12 |
serous membrane | 1.35e-07 | 12 |
cardiac atrium | 2.95e-07 | 2 |
future cardiac atrium | 2.95e-07 | 2 |
breast | 3.19e-07 | 10 |
atrioventricular valve | 3.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.47e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.