FFCP PHASE1:Hg19::chr14:93118378..93118422,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18751|TSSclassifier=N|UniProt=|association_with_transcript=-423bp_to_ENST00000556418_5end|coexpression_cluster_id=C17|description=CAGE_peak_10_at_RIN3_5end|id=chr14:93118378..93118422,+|ontology_enrichment_celltype=CL:0000037!2.28e-51!172;CL:0000566!2.28e-51!172;CL:0000738!1.58e-48!140;CL:0000988!4.68e-47!182;CL:0002032!7.10e-46!165;CL:0000837!7.10e-46!165;CL:0000763!8.33e-35!112;CL:0000049!8.33e-35!112;CL:0002031!2.42e-34!124;CL:0002087!2.38e-33!119;CL:0000766!5.39e-33!76;CL:0000557!2.42e-26!71;CL:0000839!1.89e-24!70;CL:0002057!1.18e-23!42;CL:0002194!1.40e-21!63;CL:0000576!1.40e-21!63;CL:0000040!1.40e-21!63;CL:0000559!1.40e-21!63;CL:0002009!2.62e-21!65;CL:0000860!4.76e-21!45;CL:0000134!1.41e-12!358;CL:0002320!1.38e-11!365;CL:0000219!1.90e-10!390;CL:0000838!2.30e-10!52;CL:0000542!5.80e-10!53;CL:0000051!5.80e-10!53;CL:0000094!1.72e-09!8;CL:0000945!3.91e-07!24;CL:0000826!3.91e-07!24;CL:0000034!7.94e-07!444;CL:0000236!8.04e-07!14|ontology_enrichment_celltype_v019=CL:0000860;1.00e-27;33!CL:0002057;1.00e-27;33!CL:0000473;1.76e-26;39!CL:0000234;1.76e-26;39!CL:0000766;4.45e-26;69!CL:0000094;3.57e-20;8!CL:0000576;8.63e-19;48!CL:0000763;7.64e-17;100!CL:0000738;5.02e-15;136!CL:0000081;3.47e-14;11!CL:0000097;6.16e-13;5!CL:0002087;3.44e-12;104!CL:0000988;1.28e-09;177!CL:0000775;9.51e-09;3!CL:0000767;1.59e-08;3!CL:0000623;2.78e-08;3!CL:0000226;3.03e-08;3!CL:0000842;3.03e-08;3!CL:0000163;6.06e-07;9!CL:0000219;9.55e-07;193|ontology_enrichment_celltype_v019_2=CL:0000037,9.68e-65,168;CL:0000738,2.59e-62,136;CL:0000988,1.68e-60,177;CL:0002032,1.09e-57,161;CL:0000837,1.09e-57,161;CL:0000766,8.85e-55,72;CL:0000763,5.57e-50,108;CL:0000049,5.57e-50,108;CL:0002031,1.25e-42,120;CL:0002087,6.83e-41,115;CL:0000557,9.75e-40,67;CL:0000473,4.29e-38,48;CL:0000234,4.29e-38,48;CL:0000839,6.64e-38,66;CL:0000860,1.78e-33,42;CL:0002057,1.78e-33,42;CL:0002194,1.01e-30,59;CL:0000576,1.01e-30,59;CL:0000040,1.01e-30,59;CL:0000559,1.01e-30,59;CL:0002009,2.00e-29,61;CL:0000134,7.78e-21,354;CL:0000094,3.77e-20,8;CL:0002320,4.57e-20,361;CL:0000219,3.93e-18,386;CL:0000034,2.28e-15,441;CL:0000081,3.61e-14,11;CL:0000048,4.51e-14,427;CL:0000723,1.28e-13,433;CL:0000097,6.86e-13,5;CL:0002028,6.86e-13,5;CL:0000775,9.58e-09,3;CL:0000838,1.06e-08,52;CL:0000767,1.69e-08,3;CL:0000542,1.86e-08,53;CL:0000051,1.86e-08,53;CL:0000623,2.61e-08,3;CL:0000825,2.61e-08,3;CL:0000226,3.08e-08,3;CL:0000842,3.08e-08,3;CL:0000163,6.40e-07,9|ontology_enrichment_development_v019=CL:0002057;6.36e-24;42!CL:0000049;3.96e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.28e-28!102;UBERON:0003061!2.28e-28!102;UBERON:0002193!1.84e-26!112;UBERON:0002371!2.56e-22!80;UBERON:0001474!5.46e-21!86;UBERON:0002405!1.21e-16!115;UBERON:0004765!2.02e-15!101;UBERON:0001434!2.02e-15!101;UBERON:0002384!2.36e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.32e-36,76;UBERON:0002390,6.37e-36,98;UBERON:0003061,6.37e-36,98;UBERON:0001474,1.46e-32,82;UBERON:0002193,1.97e-31,108;UBERON:0004765,1.09e-28,90;UBERON:0002405,2.06e-27,93;UBERON:0001434,9.93e-25,100;UBERON:0002384,5.10e-19,371;UBERON:0003081,8.19e-12,203;UBERON:0002204,1.19e-10,167|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0,3.05653622991805,2.95562122019805,3.46327437780189,37.7629705774948,6.1412703695554,6.34746105595912,0,0,0,0,0,7.34001098337118,3.32397245119126,8.82395568868623,5.4252717678963,0.447830948479849,0.32389366601898,0.515151135268373,1.89017710413434,1.88937971844405,1.21292030593908,1.16214518452842,2.87817521615278,0.929119112685311,1.1507695692886,1.2808035326455,0.47296445977717,1.37898272294647,0.645484683583826,1.35426486594342,1.50593871634084,1.09162460023138,0.674170453335254,2.75475503133812,2.88836124368484,1.91801137739712,1.64925650093358,0.797854630486527,0.852449501065388,0,1.70215567407342,0,1.25624332628372,2.08593167368081,1.52032191293582,0,1.84138817993782,1.89877432464531,1.05627643155971,0.637812899895131,0.628975936525128,3.81917345898083,1.80212271409808,2.89306056054744,0,0.79566670879636,0,0,2.18455444504853,0.889509253863555,0.853460445133014,0.800791974072025,1.72425731986345,1.98313461835459,0.954053754535364,8.53819453664173,8.80855784056408,11.8504700718821,33.0428321447565,19.6177997043538,2.89722493252585,0.393419540227666,0,0.822405995998037,0.83593247695339,0.977766799900771,0.473447805734733,0,0.557052284425868,1.17842362989935,0.664601683750863,1.62482318259009,0.896639238079726,0.910415432919148,0.657751618414705,0.276350017785848,0.579606171470105,0.741432815810302,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.95569624297229,0,0,0.451725357233318,0.639933055772092,0,0,0,1.41124720257313,0.8023205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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-423bp_to_ENST00000556418_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_10_at_RIN3_5end | |||
|id=chr14:93118378..93118422,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.28e-51!172;CL:0000566!2.28e-51!172;CL:0000738!1.58e-48!140;CL:0000988!4.68e-47!182;CL:0002032!7.10e-46!165;CL:0000837!7.10e-46!165;CL:0000763!8.33e-35!112;CL:0000049!8.33e-35!112;CL:0002031!2.42e-34!124;CL:0002087!2.38e-33!119;CL:0000766!5.39e-33!76;CL:0000557!2.42e-26!71;CL:0000839!1.89e-24!70;CL:0002057!1.18e-23!42;CL:0002194!1.40e-21!63;CL:0000576!1.40e-21!63;CL:0000040!1.40e-21!63;CL:0000559!1.40e-21!63;CL:0002009!2.62e-21!65;CL:0000860!4.76e-21!45;CL:0000134!1.41e-12!358;CL:0002320!1.38e-11!365;CL:0000219!1.90e-10!390;CL:0000838!2.30e-10!52;CL:0000542!5.80e-10!53;CL:0000051!5.80e-10!53;CL:0000094!1.72e-09!8;CL:0000945!3.91e-07!24;CL:0000826!3.91e-07!24;CL:0000034!7.94e-07!444;CL:0000236!8.04e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-27;33!CL:0002057;1.00e-27;33!CL:0000473;1.76e-26;39!CL:0000234;1.76e-26;39!CL:0000766;4.45e-26;69!CL:0000094;3.57e-20;8!CL:0000576;8.63e-19;48!CL:0000763;7.64e-17;100!CL:0000738;5.02e-15;136!CL:0000081;3.47e-14;11!CL:0000097;6.16e-13;5!CL:0002087;3.44e-12;104!CL:0000988;1.28e-09;177!CL:0000775;9.51e-09;3!CL:0000767;1.59e-08;3!CL:0000623;2.78e-08;3!CL:0000226;3.03e-08;3!CL:0000842;3.03e-08;3!CL:0000163;6.06e-07;9!CL:0000219;9.55e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.68e-65,168;CL:0000738,2.59e-62,136;CL:0000988,1.68e-60,177;CL:0002032,1.09e-57,161;CL:0000837,1.09e-57,161;CL:0000766,8.85e-55,72;CL:0000763,5.57e-50,108;CL:0000049,5.57e-50,108;CL:0002031,1.25e-42,120;CL:0002087,6.83e-41,115;CL:0000557,9.75e-40,67;CL:0000473,4.29e-38,48;CL:0000234,4.29e-38,48;CL:0000839,6.64e-38,66;CL:0000860,1.78e-33,42;CL:0002057,1.78e-33,42;CL:0002194,1.01e-30,59;CL:0000576,1.01e-30,59;CL:0000040,1.01e-30,59;CL:0000559,1.01e-30,59;CL:0002009,2.00e-29,61;CL:0000134,7.78e-21,354;CL:0000094,3.77e-20,8;CL:0002320,4.57e-20,361;CL:0000219,3.93e-18,386;CL:0000034,2.28e-15,441;CL:0000081,3.61e-14,11;CL:0000048,4.51e-14,427;CL:0000723,1.28e-13,433;CL:0000097,6.86e-13,5;CL:0002028,6.86e-13,5;CL:0000775,9.58e-09,3;CL:0000838,1.06e-08,52;CL:0000767,1.69e-08,3;CL:0000542,1.86e-08,53;CL:0000051,1.86e-08,53;CL:0000623,2.61e-08,3;CL:0000825,2.61e-08,3;CL:0000226,3.08e-08,3;CL:0000842,3.08e-08,3;CL:0000163,6.40e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.36e-24;42!CL:0000049;3.96e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-28!102;UBERON:0003061!2.28e-28!102;UBERON:0002193!1.84e-26!112;UBERON:0002371!2.56e-22!80;UBERON:0001474!5.46e-21!86;UBERON:0002405!1.21e-16!115;UBERON:0004765!2.02e-15!101;UBERON:0001434!2.02e-15!101;UBERON:0002384!2.36e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.32e-36,76;UBERON:0002390,6.37e-36,98;UBERON:0003061,6.37e-36,98;UBERON:0001474,1.46e-32,82;UBERON:0002193,1.97e-31,108;UBERON:0004765,1.09e-28,90;UBERON:0002405,2.06e-27,93;UBERON:0001434,9.93e-25,100;UBERON:0002384,5.10e-19,371;UBERON:0003081,8.19e-12,203;UBERON:0002204,1.19e-10,167 | |||
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| |||
|short_description=p10@RIN3 | |||
}} |
Revision as of 06:01, 11 September 2013
Short description: | p10@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RIN3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -423bp_to_ENST00000556418_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.32e-36 | 76 |
hematopoietic system | 6.37e-36 | 98 |
blood island | 6.37e-36 | 98 |
bone element | 1.46e-32 | 82 |
hemolymphoid system | 1.97e-31 | 108 |
skeletal element | 1.09e-28 | 90 |
immune system | 2.06e-27 | 93 |
skeletal system | 9.93e-25 | 100 |
connective tissue | 5.10e-19 | 371 |
lateral plate mesoderm | 8.19e-12 | 203 |
musculoskeletal system | 1.19e-10 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.