FFCP PHASE1:Hg19::chr14:81421861..81421875,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7253|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12373|TSSclassifier=S|UniProt=P16473,F5GYU5,A0PJU7,G3V2A9|association_with_transcript=0bp_to_ENST00000298171,NM_000369,NM_001018036,NM_001142626,uc001xvb.1,uc001xvc.2,uc001xvd.1,uc010tvs.1_5end|coexpression_cluster_id=C113|description=CAGE_peak_5_at_TSHR_5end|id=chr14:81421861..81421875,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;1.05e-32;5|ontology_enrichment_disease=DOID:4960!3.45e-12!1;DOID:0070004!3.45e-12!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000341!1.01e-23!2;UBERON:0003127!3.12e-23!2;UBERON:0000974!3.58e-18!10;UBERON:0009722!1.28e-16!11;UBERON:0007690!1.28e-16!11;UBERON:0008814!2.96e-12!15;UBERON:0002370!5.40e-12!4;UBERON:0005058!5.40e-12!4;UBERON:0009113!5.40e-12!4;UBERON:0003295!5.40e-12!4;UBERON:0005562!5.40e-12!4;UBERON:0003408!1.42e-10!10;UBERON:0002046!3.80e-10!5;UBERON:0004117!3.80e-10!5;UBERON:0007689!3.80e-10!5;UBERON:0007123!3.80e-10!5;UBERON:0003091!3.80e-10!5;UBERON:0003351!2.71e-08!6;UBERON:0003126!2.69e-07!7;UBERON:0001005!2.69e-07!7;UBERON:0004177!3.14e-07!7|ontology_enrichment_uberon_v019=UBERON:0000341;5.22e-79;2!UBERON:0002046;1.05e-32;5!UBERON:0000974;3.11e-27;6!UBERON:0003127;6.96e-21;2!UBERON:0003126;6.39e-07;7!UBERON:0001005;6.39e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.22e-79,2;UBERON:0002046,1.05e-32,5;UBERON:0004117,1.05e-32,5;UBERON:0007689,1.05e-32,5;UBERON:0007123,1.05e-32,5;UBERON:0003091,1.05e-32,5;UBERON:0003127,6.96e-21,2;UBERON:0000974,8.13e-17,10;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,3.83821167421766,4.52322419781107,0.193766729508018,0.372448285775147,0,34.9422898947125,19.4032501399891,0,0,0,0.215166616178029,1.33064142618405,0,0,0,0,0,0,0,0,0,0|short_description=p5@TSHR}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |||
|TSSclassifier=S | |||
|UniProt=P16473,F5GYU5,A0PJU7,G3V2A9 | |||
|association_with_transcript=0bp_to_ENST00000298171,NM_000369,NM_001018036,NM_001142626,uc001xvb.1,uc001xvc.2,uc001xvd.1,uc010tvs.1_5end | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_5_at_TSHR_5end | |||
|id=chr14:81421861..81421875,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.05e-32;5 | |||
|ontology_enrichment_disease=DOID:4960!3.45e-12!1;DOID:0070004!3.45e-12!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.01e-23!2;UBERON:0003127!3.12e-23!2;UBERON:0000974!3.58e-18!10;UBERON:0009722!1.28e-16!11;UBERON:0007690!1.28e-16!11;UBERON:0008814!2.96e-12!15;UBERON:0002370!5.40e-12!4;UBERON:0005058!5.40e-12!4;UBERON:0009113!5.40e-12!4;UBERON:0003295!5.40e-12!4;UBERON:0005562!5.40e-12!4;UBERON:0003408!1.42e-10!10;UBERON:0002046!3.80e-10!5;UBERON:0004117!3.80e-10!5;UBERON:0007689!3.80e-10!5;UBERON:0007123!3.80e-10!5;UBERON:0003091!3.80e-10!5;UBERON:0003351!2.71e-08!6;UBERON:0003126!2.69e-07!7;UBERON:0001005!2.69e-07!7;UBERON:0004177!3.14e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.22e-79;2!UBERON:0002046;1.05e-32;5!UBERON:0000974;3.11e-27;6!UBERON:0003127;6.96e-21;2!UBERON:0003126;6.39e-07;7!UBERON:0001005;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.22e-79,2;UBERON:0002046,1.05e-32,5;UBERON:0004117,1.05e-32,5;UBERON:0007689,1.05e-32,5;UBERON:0007123,1.05e-32,5;UBERON:0003091,1.05e-32,5;UBERON:0003127,6.96e-21,2;UBERON:0000974,8.13e-17,10;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,3.83821167421766,4.52322419781107,0.193766729508018,0.372448285775147,0,34.9422898947125,19.4032501399891,0,0,0,0.215166616178029,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@TSHR | |||
}} |
Revision as of 05:46, 11 September 2013
Short description: | p5@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TSHR_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 0bp_to_ENST00000298171, NM_000369, NM_001018036, NM_001142626, uc001xvb.1, uc001xvc.2, uc001xvd.1, uc010tvs.1_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | P16473F5GYU5A0PJU7G3V2A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.22e-79 | 2 |
thyroid gland | 1.05e-32 | 5 |
pharyngeal pouch | 1.05e-32 | 5 |
thyroid diverticulum | 1.05e-32 | 5 |
pharyngeal pouch 2 | 1.05e-32 | 5 |
thyroid primordium | 1.05e-32 | 5 |
open tracheal system trachea | 6.96e-21 | 2 |
neck | 8.13e-17 | 10 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
pharyngeal arch system | 6.79e-10 | 18 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.