FFCP PHASE1:Hg19::chr14:78637313..78637317,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:78637313..78637317,+|id=chr14:78637313..78637317,+|ontology_enrichment_celltype=CL:0000242!2.13e-09!2|ontology_enrichment_celltype_v019=CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9|ontology_enrichment_celltype_v019_2=CL:0000242,7.05e-34,2;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000362,1.21e-08,9|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3!CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.27e-51!57;UBERON:0005068!7.27e-51!57;UBERON:0006241!7.27e-51!57;UBERON:0007135!7.27e-51!57;UBERON:0001893!9.81e-46!34;UBERON:0002020!1.30e-45!34;UBERON:0003528!1.30e-45!34;UBERON:0002616!2.93e-45!59;UBERON:0002780!4.41e-45!41;UBERON:0001890!4.41e-45!41;UBERON:0006240!4.41e-45!41;UBERON:0001869!2.13e-44!32;UBERON:0003080!6.77e-44!42;UBERON:0000955!3.15e-43!69;UBERON:0006238!3.15e-43!69;UBERON:0002791!1.30e-42!33;UBERON:0002619!1.28e-41!22;UBERON:0005743!2.09e-41!86;UBERON:0001017!6.75e-41!82;UBERON:0001950!2.69e-40!20;UBERON:0000073!1.54e-39!94;UBERON:0001016!1.54e-39!94;UBERON:0003075!1.43e-36!86;UBERON:0007284!1.43e-36!86;UBERON:0000956!2.36e-36!25;UBERON:0000203!2.36e-36!25;UBERON:0002346!1.26e-34!90;UBERON:0007023!8.62e-32!115;UBERON:0003056!2.21e-31!61;UBERON:0000033!7.90e-25!123;UBERON:0000153!2.46e-23!129;UBERON:0007811!2.46e-23!129;UBERON:0004121!2.78e-23!169;UBERON:0000924!1.48e-22!173;UBERON:0006601!1.48e-22!173;UBERON:0001871!2.70e-17!7;UBERON:0000200!3.62e-16!6;UBERON:0000025!1.66e-15!194;UBERON:0002021!1.37e-13!5;UBERON:0002771!5.53e-12!3;UBERON:0004111!5.86e-11!241;UBERON:0002308!1.14e-10!9;UBERON:0000125!1.14e-10!9;UBERON:0004732!2.97e-10!13;UBERON:0000064!5.56e-10!219;UBERON:0000483!7.98e-10!309;UBERON:0000119!1.20e-09!312;UBERON:0000477!1.55e-09!286;UBERON:0005162!7.13e-09!2;UBERON:0000122!7.13e-09!2;UBERON:0003076!1.02e-08!15;UBERON:0003057!1.02e-08!15;UBERON:0002148!2.29e-08!2;UBERON:0009662!2.29e-08!2;UBERON:0000349!4.99e-08!5;UBERON:0001872!5.11e-08!5;UBERON:0002298!6.71e-08!8;UBERON:0004733!9.66e-08!12;UBERON:0002028!9.66e-08!12;UBERON:0007277!9.66e-08!12;UBERON:0002420!2.05e-07!9;UBERON:0007245!2.05e-07!9;UBERON:0010009!2.05e-07!9;UBERON:0010011!2.05e-07!9;UBERON:0000454!2.05e-07!9|ontology_enrichment_uberon_v019=UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0002021;1.60e-14;5!UBERON:0000010;1.12e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.23e-66,1;UBERON:0001785,1.23e-66,1;UBERON:0002464,1.23e-66,1;UBERON:0004904,1.23e-66,1;UBERON:0001021,1.23e-66,1;UBERON:0003902,1.23e-66,1;UBERON:0005425,1.23e-66,1;UBERON:0003714,3.61e-34,2;UBERON:0005162,3.61e-34,2;UBERON:0000122,3.61e-34,2;UBERON:0001781,7.35e-18,4;UBERON:0002021,1.60e-14,5;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000010,1.04e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:78637313..78637317,+ | |||
|id=chr14:78637313..78637317,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.13e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.05e-34,2;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000362,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3!CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.27e-51!57;UBERON:0005068!7.27e-51!57;UBERON:0006241!7.27e-51!57;UBERON:0007135!7.27e-51!57;UBERON:0001893!9.81e-46!34;UBERON:0002020!1.30e-45!34;UBERON:0003528!1.30e-45!34;UBERON:0002616!2.93e-45!59;UBERON:0002780!4.41e-45!41;UBERON:0001890!4.41e-45!41;UBERON:0006240!4.41e-45!41;UBERON:0001869!2.13e-44!32;UBERON:0003080!6.77e-44!42;UBERON:0000955!3.15e-43!69;UBERON:0006238!3.15e-43!69;UBERON:0002791!1.30e-42!33;UBERON:0002619!1.28e-41!22;UBERON:0005743!2.09e-41!86;UBERON:0001017!6.75e-41!82;UBERON:0001950!2.69e-40!20;UBERON:0000073!1.54e-39!94;UBERON:0001016!1.54e-39!94;UBERON:0003075!1.43e-36!86;UBERON:0007284!1.43e-36!86;UBERON:0000956!2.36e-36!25;UBERON:0000203!2.36e-36!25;UBERON:0002346!1.26e-34!90;UBERON:0007023!8.62e-32!115;UBERON:0003056!2.21e-31!61;UBERON:0000033!7.90e-25!123;UBERON:0000153!2.46e-23!129;UBERON:0007811!2.46e-23!129;UBERON:0004121!2.78e-23!169;UBERON:0000924!1.48e-22!173;UBERON:0006601!1.48e-22!173;UBERON:0001871!2.70e-17!7;UBERON:0000200!3.62e-16!6;UBERON:0000025!1.66e-15!194;UBERON:0002021!1.37e-13!5;UBERON:0002771!5.53e-12!3;UBERON:0004111!5.86e-11!241;UBERON:0002308!1.14e-10!9;UBERON:0000125!1.14e-10!9;UBERON:0004732!2.97e-10!13;UBERON:0000064!5.56e-10!219;UBERON:0000483!7.98e-10!309;UBERON:0000119!1.20e-09!312;UBERON:0000477!1.55e-09!286;UBERON:0005162!7.13e-09!2;UBERON:0000122!7.13e-09!2;UBERON:0003076!1.02e-08!15;UBERON:0003057!1.02e-08!15;UBERON:0002148!2.29e-08!2;UBERON:0009662!2.29e-08!2;UBERON:0000349!4.99e-08!5;UBERON:0001872!5.11e-08!5;UBERON:0002298!6.71e-08!8;UBERON:0004733!9.66e-08!12;UBERON:0002028!9.66e-08!12;UBERON:0007277!9.66e-08!12;UBERON:0002420!2.05e-07!9;UBERON:0007245!2.05e-07!9;UBERON:0010009!2.05e-07!9;UBERON:0010011!2.05e-07!9;UBERON:0000454!2.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0002021;1.60e-14;5!UBERON:0000010;1.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.23e-66,1;UBERON:0001785,1.23e-66,1;UBERON:0002464,1.23e-66,1;UBERON:0004904,1.23e-66,1;UBERON:0001021,1.23e-66,1;UBERON:0003902,1.23e-66,1;UBERON:0005425,1.23e-66,1;UBERON:0003714,3.61e-34,2;UBERON:0005162,3.61e-34,2;UBERON:0000122,3.61e-34,2;UBERON:0001781,7.35e-18,4;UBERON:0002021,1.60e-14,5;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000010,1.04e-08,8 | |||
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|short_description=p@chr14:78637313..78637317,+ | |||
}} |
Revision as of 05:43, 11 September 2013
Short description: | p@chr14:78637313..78637317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:78637313..78637317, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.05e-34 | 2 |
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.23e-66 | 1 |
cranial nerve | 1.23e-66 | 1 |
nerve trunk | 1.23e-66 | 1 |
nerve connecting eye with brain | 1.23e-66 | 1 |
nerve | 1.23e-66 | 1 |
retinal neural layer | 1.23e-66 | 1 |
presumptive neural retina | 1.23e-66 | 1 |
neural tissue | 3.61e-34 | 2 |
multi cell component structure | 3.61e-34 | 2 |
neuron projection bundle | 3.61e-34 | 2 |
layer of retina | 7.35e-18 | 4 |
occipital lobe | 1.60e-14 | 5 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
peripheral nervous system | 1.04e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.