FFCP PHASE1:Hg19::chr14:71108613..71108678,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23508|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20267|TSSclassifier=S|UniProt=Q92623|association_with_transcript=109bp_to_ENST00000256367,NM_015351,uc001xmi.2_5end|description=CAGE_peak_1_at_TTC9_5end|id=chr14:71108613..71108678,+|ontology_enrichment_celltype=CL:0000838!1.17e-10!52;CL:0000542!1.24e-10!53;CL:0000051!1.24e-10!53;CL:0000945!5.46e-09!24;CL:0000826!5.46e-09!24;CL:0002087!7.58e-08!119;CL:0000791!6.90e-07!18;CL:0000789!6.90e-07!18;CL:0002420!6.90e-07!18;CL:0002419!6.90e-07!18;CL:0000790!6.90e-07!18|ontology_enrichment_celltype_v019=CL:0000945;2.20e-10;24!CL:0000791;9.27e-08;18!CL:0000789;9.27e-08;18!CL:0002419;9.27e-08;18!CL:0000542;1.63e-07;53!CL:1000507;3.68e-07;10!CL:1000494;3.68e-07;10!CL:0000236;4.28e-07;13|ontology_enrichment_celltype_v019_2=CL:0000838,9.26e-13,52;CL:0000542,1.00e-12,53;CL:0000051,1.00e-12,53;CL:0000945,2.70e-10,24;CL:0000826,2.70e-10,24;CL:0002087,2.58e-08,115;CL:0000791,6.88e-08,18;CL:0000789,6.88e-08,18;CL:0002420,6.88e-08,18;CL:0002419,6.88e-08,18;CL:0000790,6.88e-08,18;CL:1000507,3.25e-07,10;CL:1000494,3.25e-07,10;CL:0000236,4.42e-07,14|ontology_enrichment_development_v019=CL:0000790;9.27e-08;18!CL:0000051;1.63e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.18e-24!115;UBERON:0001049!3.79e-16!57;UBERON:0005068!3.79e-16!57;UBERON:0006241!3.79e-16!57;UBERON:0007135!3.79e-16!57;UBERON:0005743!1.45e-14!86;UBERON:0001017!9.29e-14!82;UBERON:0002020!9.38e-13!34;UBERON:0003528!9.38e-13!34;UBERON:0003080!1.03e-12!42;UBERON:0002780!1.15e-12!41;UBERON:0001890!1.15e-12!41;UBERON:0006240!1.15e-12!41;UBERON:0001869!1.17e-12!32;UBERON:0001893!2.16e-12!34;UBERON:0003075!4.35e-12!86;UBERON:0007284!4.35e-12!86;UBERON:0002616!6.29e-12!59;UBERON:0002791!7.53e-12!33;UBERON:0002619!1.01e-11!22;UBERON:0000956!2.86e-11!25;UBERON:0000203!2.86e-11!25;UBERON:0000073!3.90e-11!94;UBERON:0001016!3.90e-11!94;UBERON:0001950!1.10e-10!20;UBERON:0002346!2.01e-10!90;UBERON:0000955!2.02e-10!69;UBERON:0006238!2.02e-10!69;UBERON:0003056!2.37e-09!61;UBERON:0000153!6.51e-07!129;UBERON:0007811!6.51e-07!129|ontology_enrichment_uberon_v019=UBERON:0002619;2.84e-13;22!UBERON:0000956;2.51e-12;25!UBERON:0000203;2.51e-12;25!UBERON:0001950;4.68e-12;20!UBERON:0001869;1.05e-11;32!UBERON:0003528;1.21e-11;34!UBERON:0002020;1.21e-11;34!UBERON:0001893;3.83e-11;34!UBERON:0002791;3.98e-11;32!UBERON:0002780;1.57e-09;41!UBERON:0001890;1.57e-09;41!UBERON:0000073;2.43e-09;53!UBERON:0002616;2.43e-09;53!UBERON:0004211;3.68e-07;10!UBERON:0009773;3.68e-07;10!UBERON:0001231;3.68e-07;10!UBERON:0004810;3.68e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.31e-24,114;UBERON:0001049,3.59e-16,56;UBERON:0005068,3.59e-16,56;UBERON:0006241,3.59e-16,56;UBERON:0007135,3.59e-16,56;UBERON:0000073,2.02e-15,53;UBERON:0002616,2.02e-15,53;UBERON:0001017,6.47e-14,81;UBERON:0003528,2.78e-13,34;UBERON:0002020,2.78e-13,34;UBERON:0002619,3.42e-13,22;UBERON:0001869,3.81e-13,32;UBERON:0001893,6.94e-13,34;UBERON:0002780,6.97e-13,41;UBERON:0001890,6.97e-13,41;UBERON:0003080,6.97e-13,41;UBERON:0006240,6.97e-13,41;UBERON:0002791,2.45e-12,32;UBERON:0000956,4.35e-12,25;UBERON:0000203,4.35e-12,25;UBERON:0001950,5.21e-12,20;UBERON:0001016,1.16e-10,89;UBERON:0003075,1.37e-10,82;UBERON:0007284,1.37e-10,82;UBERON:0000955,3.18e-10,68;UBERON:0006238,3.18e-10,68;UBERON:0002346,3.48e-09,86;UBERON:0003056,2.29e-08,61;UBERON:0010371,2.85e-07,104;UBERON:0004810,3.25e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,7.61775203154677,9.76921635161399,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0.738726348460727,0.204000691244253,2.5076377718247,2.0036519099174,0.821246550437305,2.00868223351684,11.4620108621927,10.0162719128934,7.63494578742689,3.54027849164014,0.767658796194425,2.16742572642506,2.75826367343678,1.8072355126695,4.43704812200145,5.03536803771961,4.54941543959749,2.34880351467878,0.553995408531877,0.802177789880567,1.51907609501096,7.83704159839735,10.6884909786263,7.7272670290256,6.10672602874172,4.1566353805769,3.39617685662943,0.697287110717054,0.411167888021826,0.619412741790207,1.1507695692886,1.0246428261164,1.41889337933151,0,1.29096936716765,0,2.07066573496865,0.818718450173537,1.12361742222542,0.918251677112708,0,1.91801137739712,8.57613380485462,2.19410023383795,3.83602275479425,1.16083695451434,0.56738522469114,0,1.25624332628372,1.0429658368404,1.3031330682307,2.42159801053347,0,0.632924774881769,3.80259515361495,3.18906449947565,1.67726916406701,2.13424399178341,0.150176892841506,0.64290234678832,7.69534408101371,6.56425034756997,4.56660384411585,31.6793240030381,24.5762375067959,28.4642961236338,16.2157484575273,20.0197993518006,14.9435634388166,11.8988077101275,20.989182599778,5.69212969109448,3.52342313622563,4.96955196562797,0,0,1.05353633910031,7.67168103443949,5.89516144123747,10.485676448975,5.51715434789238,3.58514493296949,5.6813736688168,0,5.01347055983281,2.3568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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20267 | |||
|TSSclassifier=S | |||
|UniProt=Q92623 | |||
|association_with_transcript=109bp_to_ENST00000256367,NM_015351,uc001xmi.2_5end | |||
|description=CAGE_peak_1_at_TTC9_5end | |||
|id=chr14:71108613..71108678,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.17e-10!52;CL:0000542!1.24e-10!53;CL:0000051!1.24e-10!53;CL:0000945!5.46e-09!24;CL:0000826!5.46e-09!24;CL:0002087!7.58e-08!119;CL:0000791!6.90e-07!18;CL:0000789!6.90e-07!18;CL:0002420!6.90e-07!18;CL:0002419!6.90e-07!18;CL:0000790!6.90e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.20e-10;24!CL:0000791;9.27e-08;18!CL:0000789;9.27e-08;18!CL:0002419;9.27e-08;18!CL:0000542;1.63e-07;53!CL:1000507;3.68e-07;10!CL:1000494;3.68e-07;10!CL:0000236;4.28e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.26e-13,52;CL:0000542,1.00e-12,53;CL:0000051,1.00e-12,53;CL:0000945,2.70e-10,24;CL:0000826,2.70e-10,24;CL:0002087,2.58e-08,115;CL:0000791,6.88e-08,18;CL:0000789,6.88e-08,18;CL:0002420,6.88e-08,18;CL:0002419,6.88e-08,18;CL:0000790,6.88e-08,18;CL:1000507,3.25e-07,10;CL:1000494,3.25e-07,10;CL:0000236,4.42e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;9.27e-08;18!CL:0000051;1.63e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.18e-24!115;UBERON:0001049!3.79e-16!57;UBERON:0005068!3.79e-16!57;UBERON:0006241!3.79e-16!57;UBERON:0007135!3.79e-16!57;UBERON:0005743!1.45e-14!86;UBERON:0001017!9.29e-14!82;UBERON:0002020!9.38e-13!34;UBERON:0003528!9.38e-13!34;UBERON:0003080!1.03e-12!42;UBERON:0002780!1.15e-12!41;UBERON:0001890!1.15e-12!41;UBERON:0006240!1.15e-12!41;UBERON:0001869!1.17e-12!32;UBERON:0001893!2.16e-12!34;UBERON:0003075!4.35e-12!86;UBERON:0007284!4.35e-12!86;UBERON:0002616!6.29e-12!59;UBERON:0002791!7.53e-12!33;UBERON:0002619!1.01e-11!22;UBERON:0000956!2.86e-11!25;UBERON:0000203!2.86e-11!25;UBERON:0000073!3.90e-11!94;UBERON:0001016!3.90e-11!94;UBERON:0001950!1.10e-10!20;UBERON:0002346!2.01e-10!90;UBERON:0000955!2.02e-10!69;UBERON:0006238!2.02e-10!69;UBERON:0003056!2.37e-09!61;UBERON:0000153!6.51e-07!129;UBERON:0007811!6.51e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.84e-13;22!UBERON:0000956;2.51e-12;25!UBERON:0000203;2.51e-12;25!UBERON:0001950;4.68e-12;20!UBERON:0001869;1.05e-11;32!UBERON:0003528;1.21e-11;34!UBERON:0002020;1.21e-11;34!UBERON:0001893;3.83e-11;34!UBERON:0002791;3.98e-11;32!UBERON:0002780;1.57e-09;41!UBERON:0001890;1.57e-09;41!UBERON:0000073;2.43e-09;53!UBERON:0002616;2.43e-09;53!UBERON:0004211;3.68e-07;10!UBERON:0009773;3.68e-07;10!UBERON:0001231;3.68e-07;10!UBERON:0004810;3.68e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.31e-24,114;UBERON:0001049,3.59e-16,56;UBERON:0005068,3.59e-16,56;UBERON:0006241,3.59e-16,56;UBERON:0007135,3.59e-16,56;UBERON:0000073,2.02e-15,53;UBERON:0002616,2.02e-15,53;UBERON:0001017,6.47e-14,81;UBERON:0003528,2.78e-13,34;UBERON:0002020,2.78e-13,34;UBERON:0002619,3.42e-13,22;UBERON:0001869,3.81e-13,32;UBERON:0001893,6.94e-13,34;UBERON:0002780,6.97e-13,41;UBERON:0001890,6.97e-13,41;UBERON:0003080,6.97e-13,41;UBERON:0006240,6.97e-13,41;UBERON:0002791,2.45e-12,32;UBERON:0000956,4.35e-12,25;UBERON:0000203,4.35e-12,25;UBERON:0001950,5.21e-12,20;UBERON:0001016,1.16e-10,89;UBERON:0003075,1.37e-10,82;UBERON:0007284,1.37e-10,82;UBERON:0000955,3.18e-10,68;UBERON:0006238,3.18e-10,68;UBERON:0002346,3.48e-09,86;UBERON:0003056,2.29e-08,61;UBERON:0010371,2.85e-07,104;UBERON:0004810,3.25e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,7.61775203154677,9.76921635161399,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0.738726348460727,0.204000691244253,2.5076377718247,2.0036519099174,0.821246550437305,2.00868223351684,11.4620108621927,10.0162719128934,7.63494578742689,3.54027849164014,0.767658796194425,2.16742572642506,2.75826367343678,1.8072355126695,4.43704812200145,5.03536803771961,4.54941543959749,2.34880351467878,0.553995408531877,0.802177789880567,1.51907609501096,7.83704159839735,10.6884909786263,7.7272670290256,6.10672602874172,4.1566353805769,3.39617685662943,0.697287110717054,0.411167888021826,0.619412741790207,1.1507695692886,1.0246428261164,1.41889337933151,0,1.29096936716765,0,2.07066573496865,0.818718450173537,1.12361742222542,0.918251677112708,0,1.91801137739712,8.57613380485462,2.19410023383795,3.83602275479425,1.16083695451434,0.56738522469114,0,1.25624332628372,1.0429658368404,1.3031330682307,2.42159801053347,0,0.632924774881769,3.80259515361495,3.18906449947565,1.67726916406701,2.13424399178341,0.150176892841506,0.64290234678832,7.69534408101371,6.56425034756997,4.56660384411585,31.6793240030381,24.5762375067959,28.4642961236338,16.2157484575273,20.0197993518006,14.9435634388166,11.8988077101275,20.989182599778,5.69212969109448,3.52342313622563,4.96955196562797,0,0,1.05353633910031,7.67168103443949,5.89516144123747,10.485676448975,5.51715434789238,3.58514493296949,5.6813736688168,0,5.01347055983281,2.3568472597987,5.09527957542329,2.70803863765016,7.81357050326618,2.86130564631732,9.70183637161689,5.52700035571697,10.1431080007268,10.3800594213442,8.56130649887082,11.4989076185474,8.0449633315272,6.51474839123266,6.18529401868734,6.07247260846807,11.7869203299916,11.0684187155591,6.65316431113862,7.67933107296641,8.95906278080929,4.99722906209383,16.1008531389931,9.85353596305256,3.42731463482045,1.60464117470104,5.35850294366356,0,0,0.383587685530591,3.2529523714611,3.00802746381534,2.31754430337318,2.3858578411533,1.94653948121054,0.378139268656271,0.443458794925128,0.175669571386252,2.75056058545197,4.37154345951051,3.70784442784429,3.8945687238562,3.65672448328461,3.72282289452822,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.732186172644509,0,0,0,0,0,0,0,0,2.63560834872127,0,1.3082821564276,1.98788780678127,0.12663051166458,0,0,0,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.600952235626387,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,1.73934767846967,2.18196896472668,2.29443676311203,2.07355300420312,1.59035721985782,1.16193942869518,1.55491582523056,1.7662459561294,0.72995471815166,0,2.57296375277154,0,0,0,0.473227200159376,0.674338760312407,0.723033089650446,0.772057809126758,0.871517776369625,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0.738155454624648,0,0.4115740113314,1.47008711385542,0,4.91413608338813,1.18157981336281,0.441463099414651,2.21379189377604,1.02940686179115,0,0,0.804231779293047,0.185176890317059,0,0,0,0.927443239800615,0.352226082707465,0,0,0,2.37061319387782,2.57545848628462,0.246217006087397,0.234004265139238,0.297262324577456,0,0.16798212819886,0.708875486211932,1.52249488594842,1.45316969256981,1.15014803749563,0,0,0,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,1.74306691720059,3.79897366491817,0,0,0,0,0,0,1.30303176000821,0.205476322550383,2.86497541183833,0,0.985153801009636,2.58753089831421,2.18183161675572,4.31960861178188,7.8083912314573,6.18631050222156,3.68535783735567,5.10351001322531,32.956309053676,2.99161459204025,4.97298616123243,0,0,0,0,0.713715955188647,0.157702415033935,0,0,0,0,0,0.184369168541703,0.260650843404249,0,3.0882908142977,4.34212854858063,3.23571301227925,3.842192080924,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,0.64341568457443,1.48418066444991,0,0,0,0,0,3.02148623979056,7.61924587152482,16.6666589973972,0.229628896329213,0,0,17.5967849033891,13.8627606787947,7.0591479225917,17.5367069583913,11.1884726626448,0,0.170093705276516,1.0795795805107,1.54227252690289,2.70946437543853,8.52872615553251,8.6657932835313,13.2972161428596,4.92524460388792,0,0,4.10320200186223,2.62411716559765,4.55529752530024,3.60643540767028,0,0,0.574265537996172,0.650060246036521,1.6068392984416,1.64340221096607,0.154048617114644,0.15350367472613,1.37836572484531,0.214840489736547,0.725083469571143,0.93749290157711,3.91740956845644,3.14041339185858,2.49847087574638,0.510450849978337,5.8671512896219,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,4.85547561184627,4.61012850143863,0,0,1.25088746543166,7.37332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| |||
|short_description=p1@TTC9 | |||
}} |
Revision as of 05:22, 11 September 2013
Short description: | p1@TTC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TTC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_ENST00000256367, NM_015351, uc001xmi.2_5end |
EntrezGene: | TTC9 |
HGNC: | 20267 |
UniProt: | Q92623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.26e-13 | 52 |
lymphocyte | 1.00e-12 | 53 |
common lymphoid progenitor | 1.00e-12 | 53 |
lymphocyte of B lineage | 2.70e-10 | 24 |
pro-B cell | 2.70e-10 | 24 |
nongranular leukocyte | 2.58e-08 | 115 |
mature alpha-beta T cell | 6.88e-08 | 18 |
alpha-beta T cell | 6.88e-08 | 18 |
immature T cell | 6.88e-08 | 18 |
mature T cell | 6.88e-08 | 18 |
immature alpha-beta T cell | 6.88e-08 | 18 |
kidney tubule cell | 3.25e-07 | 10 |
nephron tubule epithelial cell | 3.25e-07 | 10 |
B cell | 4.42e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.31e-24 | 114 |
neural tube | 3.59e-16 | 56 |
neural rod | 3.59e-16 | 56 |
future spinal cord | 3.59e-16 | 56 |
neural keel | 3.59e-16 | 56 |
regional part of nervous system | 2.02e-15 | 53 |
regional part of brain | 2.02e-15 | 53 |
central nervous system | 6.47e-14 | 81 |
brain grey matter | 2.78e-13 | 34 |
gray matter | 2.78e-13 | 34 |
regional part of cerebral cortex | 3.42e-13 | 22 |
cerebral hemisphere | 3.81e-13 | 32 |
telencephalon | 6.94e-13 | 34 |
regional part of forebrain | 6.97e-13 | 41 |
forebrain | 6.97e-13 | 41 |
anterior neural tube | 6.97e-13 | 41 |
future forebrain | 6.97e-13 | 41 |
regional part of telencephalon | 2.45e-12 | 32 |
cerebral cortex | 4.35e-12 | 25 |
pallium | 4.35e-12 | 25 |
neocortex | 5.21e-12 | 20 |
nervous system | 1.16e-10 | 89 |
neural plate | 1.37e-10 | 82 |
presumptive neural plate | 1.37e-10 | 82 |
brain | 3.18e-10 | 68 |
future brain | 3.18e-10 | 68 |
neurectoderm | 3.48e-09 | 86 |
pre-chordal neural plate | 2.29e-08 | 61 |
ecto-epithelium | 2.85e-07 | 104 |
nephron tubule epithelium | 3.25e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.