FFCP PHASE1:Hg19::chr14:58798147..58798156,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9885|TSSclassifier=S|UniProt=|association_with_transcript=48bp_to_uc010apg.1_5end|description=CAGE_peak_27_at_ARID4A_5end|id=chr14:58798147..58798156,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;3.99e-50;1!CL:0000047;7.14e-26;2|ontology_enrichment_celltype_v019_2=CL:0002553,2.42e-50,1;CL:0000047,1.80e-07,8|ontology_enrichment_development_v019=UBERON:0006215;9.45e-18;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.95e-48!57;UBERON:0005068!8.95e-48!57;UBERON:0006241!8.95e-48!57;UBERON:0007135!8.95e-48!57;UBERON:0002616!5.58e-46!59;UBERON:0000955!4.64e-41!69;UBERON:0006238!4.64e-41!69;UBERON:0001017!8.99e-40!82;UBERON:0002780!4.60e-39!41;UBERON:0001890!4.60e-39!41;UBERON:0006240!4.60e-39!41;UBERON:0003080!4.81e-38!42;UBERON:0005743!1.16e-37!86;UBERON:0000073!2.96e-36!94;UBERON:0001016!2.96e-36!94;UBERON:0002346!7.06e-36!90;UBERON:0003075!5.21e-35!86;UBERON:0007284!5.21e-35!86;UBERON:0001893!6.78e-34!34;UBERON:0001869!4.63e-32!32;UBERON:0002791!5.33e-31!33;UBERON:0003056!1.67e-30!61;UBERON:0002020!3.55e-30!34;UBERON:0003528!3.55e-30!34;UBERON:0001950!2.77e-29!20;UBERON:0007023!4.82e-29!115;UBERON:0000033!2.24e-28!123;UBERON:0000153!9.27e-27!129;UBERON:0007811!9.27e-27!129;UBERON:0002619!1.62e-26!22;UBERON:0000956!3.66e-23!25;UBERON:0000203!3.66e-23!25;UBERON:0000924!2.42e-21!173;UBERON:0006601!2.42e-21!173;UBERON:0001871!1.43e-20!7;UBERON:0004121!2.05e-20!169;UBERON:0000200!6.04e-19!6;UBERON:0002771!4.33e-15!3;UBERON:0001872!4.98e-15!5;UBERON:0004733!1.49e-13!12;UBERON:0002028!1.49e-13!12;UBERON:0007277!1.49e-13!12;UBERON:0002680!4.57e-13!9;UBERON:0001895!4.57e-13!9;UBERON:0010092!4.57e-13!9;UBERON:0004732!1.83e-12!13;UBERON:0000025!3.40e-12!194;UBERON:0000064!4.99e-11!219;UBERON:0003076!1.02e-10!15;UBERON:0003057!1.02e-10!15;UBERON:0004111!1.26e-08!241;UBERON:0000477!1.54e-08!286;UBERON:0002308!2.05e-08!9;UBERON:0000125!2.05e-08!9;UBERON:0002420!2.44e-08!9;UBERON:0007245!2.44e-08!9;UBERON:0010009!2.44e-08!9;UBERON:0010011!2.44e-08!9;UBERON:0000454!2.44e-08!9;UBERON:0002037!8.22e-08!6;UBERON:0006215!8.22e-08!6;UBERON:0005383!2.68e-07!3;UBERON:0005382!2.68e-07!3;UBERON:0000475!3.96e-07!365;UBERON:0000988!4.01e-07!3|ontology_enrichment_uberon_v019=UBERON:0002037;1.44e-09;6!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.44e-09,6;UBERON:0006215,1.44e-09,6;UBERON:0002680,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,1.52581736317083,0.442317039724898,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.610131324509816,0.751145584238999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,0,1.60114149657094,0,0,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.40781839786099,0.0657727735628491,0,0,0,0.628462359664008,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98426162742052,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p27@ARID4A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9885 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=48bp_to_uc010apg.1_5end | |||
|description=CAGE_peak_27_at_ARID4A_5end | |||
|id=chr14:58798147..58798156,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.99e-50;1!CL:0000047;7.14e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.42e-50,1;CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.45e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.95e-48!57;UBERON:0005068!8.95e-48!57;UBERON:0006241!8.95e-48!57;UBERON:0007135!8.95e-48!57;UBERON:0002616!5.58e-46!59;UBERON:0000955!4.64e-41!69;UBERON:0006238!4.64e-41!69;UBERON:0001017!8.99e-40!82;UBERON:0002780!4.60e-39!41;UBERON:0001890!4.60e-39!41;UBERON:0006240!4.60e-39!41;UBERON:0003080!4.81e-38!42;UBERON:0005743!1.16e-37!86;UBERON:0000073!2.96e-36!94;UBERON:0001016!2.96e-36!94;UBERON:0002346!7.06e-36!90;UBERON:0003075!5.21e-35!86;UBERON:0007284!5.21e-35!86;UBERON:0001893!6.78e-34!34;UBERON:0001869!4.63e-32!32;UBERON:0002791!5.33e-31!33;UBERON:0003056!1.67e-30!61;UBERON:0002020!3.55e-30!34;UBERON:0003528!3.55e-30!34;UBERON:0001950!2.77e-29!20;UBERON:0007023!4.82e-29!115;UBERON:0000033!2.24e-28!123;UBERON:0000153!9.27e-27!129;UBERON:0007811!9.27e-27!129;UBERON:0002619!1.62e-26!22;UBERON:0000956!3.66e-23!25;UBERON:0000203!3.66e-23!25;UBERON:0000924!2.42e-21!173;UBERON:0006601!2.42e-21!173;UBERON:0001871!1.43e-20!7;UBERON:0004121!2.05e-20!169;UBERON:0000200!6.04e-19!6;UBERON:0002771!4.33e-15!3;UBERON:0001872!4.98e-15!5;UBERON:0004733!1.49e-13!12;UBERON:0002028!1.49e-13!12;UBERON:0007277!1.49e-13!12;UBERON:0002680!4.57e-13!9;UBERON:0001895!4.57e-13!9;UBERON:0010092!4.57e-13!9;UBERON:0004732!1.83e-12!13;UBERON:0000025!3.40e-12!194;UBERON:0000064!4.99e-11!219;UBERON:0003076!1.02e-10!15;UBERON:0003057!1.02e-10!15;UBERON:0004111!1.26e-08!241;UBERON:0000477!1.54e-08!286;UBERON:0002308!2.05e-08!9;UBERON:0000125!2.05e-08!9;UBERON:0002420!2.44e-08!9;UBERON:0007245!2.44e-08!9;UBERON:0010009!2.44e-08!9;UBERON:0010011!2.44e-08!9;UBERON:0000454!2.44e-08!9;UBERON:0002037!8.22e-08!6;UBERON:0006215!8.22e-08!6;UBERON:0005383!2.68e-07!3;UBERON:0005382!2.68e-07!3;UBERON:0000475!3.96e-07!365;UBERON:0000988!4.01e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.44e-09;6!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.44e-09,6;UBERON:0006215,1.44e-09,6;UBERON:0002680,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,1.52581736317083,0.442317039724898,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.610131324509816,0.751145584238999,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0.558644917973244,0,0,1.60114149657094,0,0,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.620060389503552,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.40781839786099,0.0657727735628491,0,0,0,0.628462359664008,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98426162742052,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@ARID4A | |||
}} |
Revision as of 04:54, 11 September 2013
Short description: | p27@ARID4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_ARID4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_uc010apg.1_5end |
EntrezGene: | ARID4A |
HGNC: | 9885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.42e-50 | 1 |
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.44e-09 | 6 |
rhombic lip | 1.44e-09 | 6 |
regional part of metencephalon | 8.37e-07 | 9 |
metencephalon | 8.37e-07 | 9 |
future metencephalon | 8.37e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.