FFCP PHASE1:Hg19::chr14:51955948..51955957,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=122786|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19839|TSSclassifier=S|UniProt=Q96NE9|association_with_transcript=93bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end|coexpression_cluster_id=C362|description=CAGE_peak_34_at_FRMD6_5end|id=chr14:51955948..51955957,+|ontology_enrichment_celltype=CL:0002076!5.31e-35!43;CL:0002368!2.87e-25!13;CL:0000223!3.54e-24!59;CL:0002251!2.60e-18!21;CL:0002621!4.10e-14!3;CL:0000068!5.80e-14!3;CL:0000069!5.80e-14!3;CL:0000307!5.80e-14!3;CL:0000377!5.80e-14!3;CL:0000066!6.46e-14!254;CL:0002202!7.33e-12!9;CL:0002632!7.33e-12!9;CL:0000244!1.43e-10!4;CL:0000731!1.43e-10!4;CL:0002166!4.87e-07!3;CL:0000240!6.07e-07!6;CL:0000311!6.07e-07!6;CL:0000079!6.07e-07!6;CL:0000237!6.07e-07!6;CL:0000036!6.07e-07!6;CL:0000357!6.07e-07!6;CL:0000114!6.07e-07!6|ontology_enrichment_celltype_v019=CL:0000307;7.01e-25;3!CL:0002368;1.98e-22;13!CL:1001319;2.71e-19;1!CL:1000600;2.71e-19;1!CL:0002076;4.06e-16;42!CL:0002202;5.86e-09;9!CL:0002632;5.86e-09;9!CL:0002166;1.87e-07;3!CL:0002231;1.87e-07;3!CL:0002621;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0000068,1.14e-24,3;CL:0000069,1.14e-24,3;CL:0000307,1.14e-24,3;CL:0000377,1.14e-24,3;CL:0002368,2.21e-22,13;CL:0002076,1.19e-20,42;CL:1001319,1.88e-19,1;CL:1000600,1.88e-19,1;CL:0000223,6.89e-15,58;CL:0002202,6.88e-09,9;CL:0002632,6.88e-09,9;CL:0000066,6.20e-08,253;CL:0002166,1.82e-07,3;CL:0002231,1.93e-07,3;CL:0002621,2.47e-07,3|ontology_enrichment_development_v019=CL:0000377;7.01e-25;3!CL:0000223;5.21e-09;58|ontology_enrichment_disease=DOID:1749!8.78e-18!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003729!1.16e-20!5;UBERON:0000161!9.22e-18!35;UBERON:0003343!5.24e-17!4;UBERON:0004785!5.24e-17!4;UBERON:0001004!1.06e-16!72;UBERON:0000344!2.51e-16!12;UBERON:0000166!8.21e-15!21;UBERON:0000365!1.42e-14!5;UBERON:0004119!3.20e-14!169;UBERON:0000925!3.20e-14!169;UBERON:0006595!3.20e-14!169;UBERON:0001949!4.10e-14!3;UBERON:0000165!3.52e-13!28;UBERON:0000930!3.52e-13!28;UBERON:0005910!3.71e-12!6;UBERON:0007196!2.22e-10!14;UBERON:0001558!2.22e-10!14;UBERON:0003102!2.82e-10!95;UBERON:0003126!5.32e-10!7;UBERON:0001005!5.32e-10!7;UBERON:0001255!7.24e-10!2;UBERON:0001556!7.24e-10!2;UBERON:0000065!5.67e-09!53;UBERON:0001007!6.12e-08!155;UBERON:0001555!6.12e-08!155;UBERON:0007026!6.12e-08!155;UBERON:0001444!6.51e-07!48;UBERON:0000974!7.49e-07!10|ontology_enrichment_uberon_v019=UBERON:0004645;2.71e-19;1!UBERON:0001256;2.71e-19;1!UBERON:0001259;2.71e-19;1!UBERON:0000365;2.33e-15;5!UBERON:0000486;3.95e-14;12!UBERON:0005910;5.76e-13;6!UBERON:0003126;2.98e-11;7!UBERON:0001005;2.98e-11;7!UBERON:0001255;2.48e-10;2!UBERON:0001556;2.48e-10;2!UBERON:0003350;5.79e-10;8!UBERON:0000344;1.00e-08;20!UBERON:0001949;2.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.88e-19,1;UBERON:0001256,1.88e-19,1;UBERON:0001259,1.88e-19,1;UBERON:0000365,1.51e-15,5;UBERON:0005910,4.01e-13,6;UBERON:0003126,3.66e-11,7;UBERON:0001005,3.66e-11,7;UBERON:0001255,2.07e-10,2;UBERON:0001556,2.07e-10,2;UBERON:0003350,5.06e-10,8;UBERON:0000344,9.74e-09,20;UBERON:0001004,1.37e-08,74;UBERON:0004119,1.74e-08,160;UBERON:0000925,1.74e-08,160;UBERON:0006595,1.74e-08,160;UBERON:0000161,2.21e-08,36;UBERON:0001949,2.47e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35174979478403,0.708875486211932,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,0.192190067365106,1.65896526242959,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,1.08890984861323,0,0.43050537267123,0,0.443430153536676,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.174118413160805,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=122786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |||
|TSSclassifier=S | |||
|UniProt=Q96NE9 | |||
|association_with_transcript=93bp_to_ENST00000356218,NM_001042481,uc001wzb.2_5end | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_34_at_FRMD6_5end | |||
|id=chr14:51955948..51955957,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.31e-35!43;CL:0002368!2.87e-25!13;CL:0000223!3.54e-24!59;CL:0002251!2.60e-18!21;CL:0002621!4.10e-14!3;CL:0000068!5.80e-14!3;CL:0000069!5.80e-14!3;CL:0000307!5.80e-14!3;CL:0000377!5.80e-14!3;CL:0000066!6.46e-14!254;CL:0002202!7.33e-12!9;CL:0002632!7.33e-12!9;CL:0000244!1.43e-10!4;CL:0000731!1.43e-10!4;CL:0002166!4.87e-07!3;CL:0000240!6.07e-07!6;CL:0000311!6.07e-07!6;CL:0000079!6.07e-07!6;CL:0000237!6.07e-07!6;CL:0000036!6.07e-07!6;CL:0000357!6.07e-07!6;CL:0000114!6.07e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000307;7.01e-25;3!CL:0002368;1.98e-22;13!CL:1001319;2.71e-19;1!CL:1000600;2.71e-19;1!CL:0002076;4.06e-16;42!CL:0002202;5.86e-09;9!CL:0002632;5.86e-09;9!CL:0002166;1.87e-07;3!CL:0002231;1.87e-07;3!CL:0002621;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.14e-24,3;CL:0000069,1.14e-24,3;CL:0000307,1.14e-24,3;CL:0000377,1.14e-24,3;CL:0002368,2.21e-22,13;CL:0002076,1.19e-20,42;CL:1001319,1.88e-19,1;CL:1000600,1.88e-19,1;CL:0000223,6.89e-15,58;CL:0002202,6.88e-09,9;CL:0002632,6.88e-09,9;CL:0000066,6.20e-08,253;CL:0002166,1.82e-07,3;CL:0002231,1.93e-07,3;CL:0002621,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;7.01e-25;3!CL:0000223;5.21e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!8.78e-18!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!1.16e-20!5;UBERON:0000161!9.22e-18!35;UBERON:0003343!5.24e-17!4;UBERON:0004785!5.24e-17!4;UBERON:0001004!1.06e-16!72;UBERON:0000344!2.51e-16!12;UBERON:0000166!8.21e-15!21;UBERON:0000365!1.42e-14!5;UBERON:0004119!3.20e-14!169;UBERON:0000925!3.20e-14!169;UBERON:0006595!3.20e-14!169;UBERON:0001949!4.10e-14!3;UBERON:0000165!3.52e-13!28;UBERON:0000930!3.52e-13!28;UBERON:0005910!3.71e-12!6;UBERON:0007196!2.22e-10!14;UBERON:0001558!2.22e-10!14;UBERON:0003102!2.82e-10!95;UBERON:0003126!5.32e-10!7;UBERON:0001005!5.32e-10!7;UBERON:0001255!7.24e-10!2;UBERON:0001556!7.24e-10!2;UBERON:0000065!5.67e-09!53;UBERON:0001007!6.12e-08!155;UBERON:0001555!6.12e-08!155;UBERON:0007026!6.12e-08!155;UBERON:0001444!6.51e-07!48;UBERON:0000974!7.49e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.71e-19;1!UBERON:0001256;2.71e-19;1!UBERON:0001259;2.71e-19;1!UBERON:0000365;2.33e-15;5!UBERON:0000486;3.95e-14;12!UBERON:0005910;5.76e-13;6!UBERON:0003126;2.98e-11;7!UBERON:0001005;2.98e-11;7!UBERON:0001255;2.48e-10;2!UBERON:0001556;2.48e-10;2!UBERON:0003350;5.79e-10;8!UBERON:0000344;1.00e-08;20!UBERON:0001949;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.88e-19,1;UBERON:0001256,1.88e-19,1;UBERON:0001259,1.88e-19,1;UBERON:0000365,1.51e-15,5;UBERON:0005910,4.01e-13,6;UBERON:0003126,3.66e-11,7;UBERON:0001005,3.66e-11,7;UBERON:0001255,2.07e-10,2;UBERON:0001556,2.07e-10,2;UBERON:0003350,5.06e-10,8;UBERON:0000344,9.74e-09,20;UBERON:0001004,1.37e-08,74;UBERON:0004119,1.74e-08,160;UBERON:0000925,1.74e-08,160;UBERON:0006595,1.74e-08,160;UBERON:0000161,2.21e-08,36;UBERON:0001949,2.47e-07,3 | |||
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|short_description=p34@FRMD6 | |||
}} |
Revision as of 04:41, 11 September 2013
Short description: | p34@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | 93bp_to_ENST00000356218, NM_001042481, uc001wzb.2_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | Q96NE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.14e-24 | 3 |
branched duct epithelial cell | 1.14e-24 | 3 |
tracheal epithelial cell | 1.14e-24 | 3 |
tracheoblast | 1.14e-24 | 3 |
respiratory epithelial cell | 2.21e-22 | 13 |
endo-epithelial cell | 1.19e-20 | 42 |
bladder cell | 1.88e-19 | 1 |
lower urinary tract cell | 1.88e-19 | 1 |
endodermal cell | 6.89e-15 | 58 |
epithelial cell of tracheobronchial tree | 6.88e-09 | 9 |
epithelial cell of lower respiratory tract | 6.88e-09 | 9 |
epithelial cell | 6.20e-08 | 253 |
epithelial cell of Malassez | 1.82e-07 | 3 |
epithelial cell of prostate | 1.93e-07 | 3 |
gingival epithelial cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.88e-19 | 1 |
wall of urinary bladder | 1.88e-19 | 1 |
mucosa of urinary bladder | 1.88e-19 | 1 |
urothelium | 1.51e-15 | 5 |
transitional epithelium | 4.01e-13 | 6 |
trachea | 3.66e-11 | 7 |
respiratory airway | 3.66e-11 | 7 |
urinary bladder | 2.07e-10 | 2 |
lower urinary tract | 2.07e-10 | 2 |
epithelium of mucosa | 5.06e-10 | 8 |
mucosa | 9.74e-09 | 20 |
respiratory system | 1.37e-08 | 74 |
endoderm-derived structure | 1.74e-08 | 160 |
endoderm | 1.74e-08 | 160 |
presumptive endoderm | 1.74e-08 | 160 |
orifice | 2.21e-08 | 36 |
gingival epithelium | 2.47e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.