FFCP PHASE1:Hg19::chr14:50361127..50361150,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=382|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=659|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_BC030291_5end|description=CAGE_peak_9_at_ARF6_5end|id=chr14:50361127..50361150,+|ontology_enrichment_celltype=CL:0002087!3.03e-23!119;CL:0002031!2.97e-22!124;CL:0000738!3.94e-21!140;CL:0002032!3.45e-19!165;CL:0000837!3.45e-19!165;CL:0000037!9.14e-19!172;CL:0000566!9.14e-19!172;CL:0000988!1.12e-18!182;CL:0002057!2.77e-18!42;CL:0002009!3.97e-17!65;CL:0000860!1.94e-16!45;CL:0002194!3.67e-16!63;CL:0000576!3.67e-16!63;CL:0000040!3.67e-16!63;CL:0000559!3.67e-16!63;CL:0000557!7.48e-15!71;CL:0000839!2.00e-14!70;CL:0000766!4.05e-13!76;CL:0000763!1.70e-11!112;CL:0000049!1.70e-11!112;CL:0000134!2.86e-10!358;CL:0000063!4.65e-10!578;CL:0002320!7.91e-10!365;CL:0000219!1.60e-09!390;CL:0000542!6.31e-08!53;CL:0000051!6.31e-08!53;CL:0000548!8.27e-08!679;CL:0000004!8.27e-08!679;CL:0000255!8.27e-08!679;CL:0000003!1.27e-07!722;CL:0000012!1.55e-07!682;CL:0000838!1.65e-07!52|ontology_enrichment_celltype_v019=CL:0000860;1.32e-27;33!CL:0002057;1.32e-27;33!CL:0000473;1.19e-22;39!CL:0000234;1.19e-22;39!CL:0000576;9.32e-19;48!CL:0000766;1.61e-12;69!CL:0002087;2.68e-08;104!CL:0000738;5.35e-07;136|ontology_enrichment_celltype_v019_2=CL:0000473,2.96e-31,48;CL:0000234,2.96e-31,48;CL:0000860,6.07e-31,42;CL:0002057,6.07e-31,42;CL:0002009,1.19e-30,61;CL:0002194,1.37e-28,59;CL:0000576,1.37e-28,59;CL:0000040,1.37e-28,59;CL:0000559,1.37e-28,59;CL:0000557,1.09e-26,67;CL:0002087,2.99e-26,115;CL:0002031,1.61e-25,120;CL:0000839,3.40e-24,66;CL:0000738,1.49e-23,136;CL:0000766,2.33e-22,72;CL:0002032,3.58e-21,161;CL:0000837,3.58e-21,161;CL:0000037,1.88e-20,168;CL:0000988,3.46e-19,177;CL:0000763,8.78e-18,108;CL:0000049,8.78e-18,108;CL:0000134,7.36e-08,354;CL:0002320,2.55e-07,361|ontology_enrichment_development_v019=CL:0002057;1.51e-22;42|ontology_enrichment_disease=DOID:162!3.93e-08!235;DOID:14566!2.10e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.80e-15!80;UBERON:0001474!1.67e-14!86;UBERON:0004765!1.35e-12!101;UBERON:0001434!1.35e-12!101;UBERON:0002390!7.94e-12!102;UBERON:0003061!7.94e-12!102;UBERON:0002384!1.40e-10!375;UBERON:0002193!1.86e-10!112;UBERON:0002405!1.52e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.11e-26,76;UBERON:0001474,1.37e-24,82;UBERON:0004765,4.02e-21,90;UBERON:0002405,6.92e-21,93;UBERON:0001434,1.61e-19,100;UBERON:0002390,2.04e-19,98;UBERON:0003061,2.04e-19,98;UBERON:0002193,3.71e-17,108;UBERON:0002204,1.73e-08,167;UBERON:0002384,2.80e-08,371|phase1_expression=0.908391896352783,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0.123766352960047,0.994192127183747,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.410623275218653,0.87879847716362,0.458480434487708,0.492603536699674,0.393553906568396,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0.852139206383318,0.995184627411951,0.293600439334847,0,0.601633342410425,2.17010870715852,1.11957737119962,0.647787332037959,0.257575567634187,3.78035420826868,3.02300754951048,2.42584061187816,2.78914844286822,1.6446715520873,1.85823822537062,2.8769239232215,2.0492856522328,1.18241114944293,3.10271112662957,1.29096936716765,0,3.20011977222428,4.36649840092553,1.79778787556068,4.59125838556354,0.641858054152187,4.47535988059329,0.989553900560148,2.79249120670285,2.55734850319616,3.48251086354301,0.56738522469114,1.24564449799115,3.76872997885115,6.25779502104242,1.3031330682307,2.42159801053347,1.10483290796269,2.84816148696796,1.05627643155971,0.637812899895131,0.628975936525128,1.46027220490444,1.05123824989054,0.803627933485401,1.42506371870624,1.39241674039363,1.27864907635244,3.51992488922645,0,0.889509253863555,0.853460445133014,0,0,0,1.90810750907073,2.27685187643779,1.17447437874188,1.91136614062614,0,0,0.526768169550154,0.590129310341499,0.786021525498329,2.2616164889946,0.668745981562712,0.32592226663359,0.473447805734733,1.94826728407911,1.11410456885174,1.76763544484902,0.443067789167242,1.08321545506006,4.22701355094728,2.73124629875744,4.43982342429925,1.65810010671509,0.869409257205157,0.444859689486181,0.535081656179426,1.04535523804977,1.58633079776593,0.383220493601921,0,0,0.637130828648193,0,0.950452044448374,0.451725357233318,0.383959833463255,0,0.947109008176067,0,0.604820229674197,1.60464117470104,2.02754165435919,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0.189069634328136,0.443458794925128,0.966182642624386,0.196468613246569,0.364295288292542,0,0.324547393654683,0,1.06366368415092,1.19245312152671,2.28797964312051,0,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,1.06729878806013,0,0,0,0.732186172644509,0.367663080345869,0,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.54960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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=659 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC030291_5end | |||
|description=CAGE_peak_9_at_ARF6_5end | |||
|id=chr14:50361127..50361150,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.03e-23!119;CL:0002031!2.97e-22!124;CL:0000738!3.94e-21!140;CL:0002032!3.45e-19!165;CL:0000837!3.45e-19!165;CL:0000037!9.14e-19!172;CL:0000566!9.14e-19!172;CL:0000988!1.12e-18!182;CL:0002057!2.77e-18!42;CL:0002009!3.97e-17!65;CL:0000860!1.94e-16!45;CL:0002194!3.67e-16!63;CL:0000576!3.67e-16!63;CL:0000040!3.67e-16!63;CL:0000559!3.67e-16!63;CL:0000557!7.48e-15!71;CL:0000839!2.00e-14!70;CL:0000766!4.05e-13!76;CL:0000763!1.70e-11!112;CL:0000049!1.70e-11!112;CL:0000134!2.86e-10!358;CL:0000063!4.65e-10!578;CL:0002320!7.91e-10!365;CL:0000219!1.60e-09!390;CL:0000542!6.31e-08!53;CL:0000051!6.31e-08!53;CL:0000548!8.27e-08!679;CL:0000004!8.27e-08!679;CL:0000255!8.27e-08!679;CL:0000003!1.27e-07!722;CL:0000012!1.55e-07!682;CL:0000838!1.65e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-27;33!CL:0002057;1.32e-27;33!CL:0000473;1.19e-22;39!CL:0000234;1.19e-22;39!CL:0000576;9.32e-19;48!CL:0000766;1.61e-12;69!CL:0002087;2.68e-08;104!CL:0000738;5.35e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.96e-31,48;CL:0000234,2.96e-31,48;CL:0000860,6.07e-31,42;CL:0002057,6.07e-31,42;CL:0002009,1.19e-30,61;CL:0002194,1.37e-28,59;CL:0000576,1.37e-28,59;CL:0000040,1.37e-28,59;CL:0000559,1.37e-28,59;CL:0000557,1.09e-26,67;CL:0002087,2.99e-26,115;CL:0002031,1.61e-25,120;CL:0000839,3.40e-24,66;CL:0000738,1.49e-23,136;CL:0000766,2.33e-22,72;CL:0002032,3.58e-21,161;CL:0000837,3.58e-21,161;CL:0000037,1.88e-20,168;CL:0000988,3.46e-19,177;CL:0000763,8.78e-18,108;CL:0000049,8.78e-18,108;CL:0000134,7.36e-08,354;CL:0002320,2.55e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-22;42 | |||
|ontology_enrichment_disease=DOID:162!3.93e-08!235;DOID:14566!2.10e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.80e-15!80;UBERON:0001474!1.67e-14!86;UBERON:0004765!1.35e-12!101;UBERON:0001434!1.35e-12!101;UBERON:0002390!7.94e-12!102;UBERON:0003061!7.94e-12!102;UBERON:0002384!1.40e-10!375;UBERON:0002193!1.86e-10!112;UBERON:0002405!1.52e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.11e-26,76;UBERON:0001474,1.37e-24,82;UBERON:0004765,4.02e-21,90;UBERON:0002405,6.92e-21,93;UBERON:0001434,1.61e-19,100;UBERON:0002390,2.04e-19,98;UBERON:0003061,2.04e-19,98;UBERON:0002193,3.71e-17,108;UBERON:0002204,1.73e-08,167;UBERON:0002384,2.80e-08,371 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0.123766352960047,0.994192127183747,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.410623275218653,0.87879847716362,0.458480434487708,0.492603536699674,0.393553906568396,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0.852139206383318,0.995184627411951,0.293600439334847,0,0.601633342410425,2.17010870715852,1.11957737119962,0.647787332037959,0.257575567634187,3.78035420826868,3.02300754951048,2.42584061187816,2.78914844286822,1.6446715520873,1.85823822537062,2.8769239232215,2.0492856522328,1.18241114944293,3.10271112662957,1.29096936716765,0,3.20011977222428,4.36649840092553,1.79778787556068,4.59125838556354,0.641858054152187,4.47535988059329,0.989553900560148,2.79249120670285,2.55734850319616,3.48251086354301,0.56738522469114,1.24564449799115,3.76872997885115,6.25779502104242,1.3031330682307,2.42159801053347,1.10483290796269,2.84816148696796,1.05627643155971,0.637812899895131,0.628975936525128,1.46027220490444,1.05123824989054,0.803627933485401,1.42506371870624,1.39241674039363,1.27864907635244,3.51992488922645,0,0.889509253863555,0.853460445133014,0,0,0,1.90810750907073,2.27685187643779,1.17447437874188,1.91136614062614,0,0,0.526768169550154,0.590129310341499,0.786021525498329,2.2616164889946,0.668745981562712,0.32592226663359,0.473447805734733,1.94826728407911,1.11410456885174,1.76763544484902,0.443067789167242,1.08321545506006,4.22701355094728,2.73124629875744,4.43982342429925,1.65810010671509,0.869409257205157,0.444859689486181,0.535081656179426,1.04535523804977,1.58633079776593,0.383220493601921,0,0,0.637130828648193,0,0.950452044448374,0.451725357233318,0.383959833463255,0,0.947109008176067,0,0.604820229674197,1.60464117470104,2.02754165435919,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0.189069634328136,0.443458794925128,0.966182642624386,0.196468613246569,0.364295288292542,0,0.324547393654683,0,1.06366368415092,1.19245312152671,2.28797964312051,0,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,1.06729878806013,0,0,0,0.732186172644509,0.367663080345869,0,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0.436094052142534,1.98788780678127,0.379891534993739,0.132409180813219,0,1.77334191099179,0,0,0.24666754841716,0,0,0.817309515567294,0,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.587172493218824,1.13311061057692,0.280901613404497,1.22492502752936,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0,0,0.500474079487857,0,0,1.22595118319608,0.751190294532984,0.567160915800105,0,0.640672166455702,0.423863802319124,0,0.412210116953756,0,0.744467425326359,0.675105328965065,0,0,0.0920498986422993,0.323292113637624,0,0.201504196455281,0.169560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0,0.348581828608555,0.414644220061482,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0,0.709840800239063,0.168584690078102,0.723033089650446,0.661763836394364,0.217879444092406,0.949082476444386,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.491953754172454,0.343135620597051,0.109750285408626,0,0.603173834469785,0.555530670951178,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0.858486162094873,1.96973604869918,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0.53735113621709,0,0,0,0.352193736052904,0,0.288239906833923,0.6312121671319,0.126995788584338,0,0,0,0.308482478109971,0.901029173531752,0,0.112131084345361,0,0.36669142910475,0.775630294546667,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,1.41849132023278,0,0.142977993658148,0.542621605391443,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.799783929456456,2.43247561282381,1.00451418286425,0,0.239624855491583,1.14861935834114,1.42636905040718,0.723906533337896,0,0.716243852959582,1.45710687191585,0.394061520403854,1.07813787429759,1.79680250791648,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0.813795071099207,1.03985430765404,1.60586089917446,0.315404830067869,0.585707074963566,0.601892199455438,0,0,0,0,0.521301686808497,0.195801157462741,0,0.206768026122887,0.431428401637234,0.74709290462411,0.909382714338778,1.66435439510497,0,0.248107807818777,0.61384789315225,0,0.768834895534206,0,1.12597744800525,0,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.697262270759755,0.120859449591622,0.200506470303285,0.736647911487171,0.114814448164607,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.422206515571503,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0.501689773854853,1.01950509218015,0,0.671624264166535,0.219259876645935,0.522870902049801,0.512900250232778,0,0,0.103041011647722,0.183138929636687,0.0825094999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| |||
|short_description=p9@ARF6 | |||
}} |
Revision as of 04:37, 11 September 2013
Short description: | p9@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC030291_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.96e-31 | 48 |
phagocyte | 2.96e-31 | 48 |
classical monocyte | 6.07e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.07e-31 | 42 |
macrophage dendritic cell progenitor | 1.19e-30 | 61 |
monopoietic cell | 1.37e-28 | 59 |
monocyte | 1.37e-28 | 59 |
monoblast | 1.37e-28 | 59 |
promonocyte | 1.37e-28 | 59 |
granulocyte monocyte progenitor cell | 1.09e-26 | 67 |
nongranular leukocyte | 2.99e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.61e-25 | 120 |
myeloid lineage restricted progenitor cell | 3.40e-24 | 66 |
leukocyte | 1.49e-23 | 136 |
myeloid leukocyte | 2.33e-22 | 72 |
hematopoietic oligopotent progenitor cell | 3.58e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.58e-21 | 161 |
hematopoietic stem cell | 1.88e-20 | 168 |
hematopoietic cell | 3.46e-19 | 177 |
myeloid cell | 8.78e-18 | 108 |
common myeloid progenitor | 8.78e-18 | 108 |
mesenchymal cell | 7.36e-08 | 354 |
connective tissue cell | 2.55e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.11e-26 | 76 |
bone element | 1.37e-24 | 82 |
skeletal element | 4.02e-21 | 90 |
immune system | 6.92e-21 | 93 |
skeletal system | 1.61e-19 | 100 |
hematopoietic system | 2.04e-19 | 98 |
blood island | 2.04e-19 | 98 |
hemolymphoid system | 3.71e-17 | 108 |
musculoskeletal system | 1.73e-08 | 167 |
connective tissue | 2.80e-08 | 371 |
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