FFCP PHASE1:Hg19::chr14:36983118..36983142,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18387|TSSclassifier=S|UniProt=|association_with_transcript=-84bp_to_ENST00000518529_5end|coexpression_cluster_id=C1393|description=CAGE_peak_3_at_SFTA3_5end|id=chr14:36983118..36983142,-|ontology_enrichment_celltype=CL:0000322!2.55e-08!3;CL:0000082!3.12e-07!19;CL:0002553!4.43e-07!1;CL:0000167!6.99e-07!1;CL:0000164!6.99e-07!1;CL:0000502!6.99e-07!1;CL:0000172!6.99e-07!1;CL:0000173!6.99e-07!1;CL:0002351!6.99e-07!1|ontology_enrichment_celltype_v019=CL:0002553;1.48e-12;1!CL:0000167;4.07e-12;1!CL:0000164;4.07e-12;1!CL:0000502;4.07e-12;1!CL:0000172;4.07e-12;1!CL:0000173;4.07e-12;1!CL:0000082;1.19e-09;19|ontology_enrichment_celltype_v019_2=CL:0002553,1.57e-12,1;CL:0000167,3.85e-12,1;CL:0000164,3.85e-12,1;CL:0000502,3.85e-12,1;CL:0000172,3.85e-12,1;CL:0000173,3.85e-12,1;CL:0002351,3.85e-12,1;CL:0000082,1.19e-09,19|ontology_enrichment_development_v019=UBERON:0007123;4.55e-21;5!UBERON:0008947;2.95e-18;29!UBERON:0001041;1.25e-17;30!CL:0002351;4.07e-12;1|ontology_enrichment_disease=DOID:4430!6.99e-07!1;DOID:3112!9.25e-07!1|ontology_enrichment_disease_v019=DOID:1324;3.63e-12;15!DOID:4430;4.07e-12;1!DOID:3905;9.26e-12;9!DOID:0050615;2.02e-11;16!DOID:3908;6.65e-10;5!DOID:1325;2.86e-07;7!DOID:3904;2.86e-07;7!DOID:3910;7.61e-07;2|ontology_enrichment_disease_v019_2=DOID:1324,3.63e-12,15;DOID:4430,3.85e-12,1;DOID:3905,9.09e-12,9;DOID:0050615,2.02e-11,16;DOID:3908,6.51e-10,5;DOID:1325,2.86e-07,7;DOID:3904,2.86e-07,7;DOID:3910,7.61e-07,2|ontology_enrichment_uberon=UBERON:0002046!1.31e-18!5;UBERON:0004117!1.31e-18!5;UBERON:0007689!1.31e-18!5;UBERON:0007123!1.31e-18!5;UBERON:0003091!1.31e-18!5;UBERON:0002048!2.30e-15!22;UBERON:0000117!2.30e-15!22;UBERON:0000171!2.30e-15!22;UBERON:0000170!2.30e-15!22;UBERON:0005597!2.30e-15!22;UBERON:0000118!2.30e-15!22;UBERON:0005178!1.11e-14!34;UBERON:0002224!1.11e-14!34;UBERON:0005181!3.29e-14!35;UBERON:0008947!6.09e-13!38;UBERON:0003258!6.09e-13!38;UBERON:0000341!1.91e-12!2;UBERON:0003127!1.13e-11!2;UBERON:0005153!6.59e-11!37;UBERON:0000065!1.42e-10!53;UBERON:0005911!5.16e-09!82;UBERON:0000915!5.78e-09!52;UBERON:0001004!1.11e-08!72;UBERON:0009722!1.65e-08!11;UBERON:0007690!1.65e-08!11;UBERON:0004821!2.55e-08!3;UBERON:0003215!2.55e-08!3;UBERON:0002299!2.55e-08!3;UBERON:0006524!2.55e-08!3;UBERON:0008874!2.55e-08!3;UBERON:0002169!2.55e-08!3;UBERON:0004894!2.55e-08!3;UBERON:0005157!1.72e-07!51;UBERON:0004802!3.12e-07!19;UBERON:0000115!3.12e-07!19;UBERON:0002171!3.95e-07!1;UBERON:0006518!3.95e-07!1;UBERON:0008949!3.95e-07!1;UBERON:0000101!3.95e-07!1;UBERON:0002167!3.95e-07!1|ontology_enrichment_uberon_v019=UBERON:0002048;3.04e-24;22!UBERON:0000117;3.04e-24;22!UBERON:0000171;3.04e-24;22!UBERON:0000170;3.04e-24;22!UBERON:0000341;3.49e-23;2!UBERON:0002046;4.55e-21;5!UBERON:0005178;2.70e-13;34!UBERON:0002224;2.70e-13;34!UBERON:0002171;1.18e-12;1!UBERON:0006518;1.18e-12;1!UBERON:0008949;1.18e-12;1!UBERON:0000101;1.18e-12;1!UBERON:0002167;1.18e-12;1!UBERON:0005181;4.56e-12;35!UBERON:0004802;1.19e-09;19!UBERON:0000115;1.19e-09;19!UBERON:0000065;5.27e-09;44!UBERON:0004807;2.33e-08;22!UBERON:0000974;2.34e-08;6!UBERON:0004903;7.61e-07;2!UBERON:0002173;7.61e-07;2!UBERON:0002186;7.61e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.99e-24,22;UBERON:0000117,2.99e-24,22;UBERON:0000171,2.99e-24,22;UBERON:0000170,2.99e-24,22;UBERON:0005597,2.99e-24,22;UBERON:0000118,2.99e-24,22;UBERON:0000341,3.49e-23,2;UBERON:0002046,4.55e-21,5;UBERON:0004117,4.55e-21,5;UBERON:0007689,4.55e-21,5;UBERON:0007123,4.55e-21,5;UBERON:0003091,4.55e-21,5;UBERON:0005153,2.10e-18,37;UBERON:0005178,1.73e-15,34;UBERON:0002224,1.73e-15,34;UBERON:0005181,4.97e-15,35;UBERON:0005911,5.11e-15,82;UBERON:0005157,2.62e-14,47;UBERON:0008947,8.55e-14,38;UBERON:0003258,8.55e-14,38;UBERON:0002171,1.25e-12,1;UBERON:0006518,1.25e-12,1;UBERON:0008949,1.25e-12,1;UBERON:0000101,1.25e-12,1;UBERON:0002167,1.25e-12,1;UBERON:0000915,6.60e-10,52;UBERON:0009722,6.76e-10,11;UBERON:0007690,6.76e-10,11;UBERON:0004802,1.19e-09,19;UBERON:0000115,1.19e-09,19;UBERON:0000065,1.63e-09,54;UBERON:0001007,9.43e-08,145;UBERON:0001555,9.43e-08,145;UBERON:0007026,9.43e-08,145;UBERON:0004119,7.01e-07,160;UBERON:0000925,7.01e-07,160;UBERON:0006595,7.01e-07,160;UBERON:0004903,7.61e-07,2;UBERON:0002173,7.61e-07,2;UBERON:0002186,7.61e-07,2;UBERON:0001004,9.28e-07,74|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=253970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_ENST00000518529_5end | |||
|coexpression_cluster_id=C1393 | |||
|description=CAGE_peak_3_at_SFTA3_5end | |||
|id=chr14:36983118..36983142,- | |||
|ontology_enrichment_celltype=CL:0000322!2.55e-08!3;CL:0000082!3.12e-07!19;CL:0002553!4.43e-07!1;CL:0000167!6.99e-07!1;CL:0000164!6.99e-07!1;CL:0000502!6.99e-07!1;CL:0000172!6.99e-07!1;CL:0000173!6.99e-07!1;CL:0002351!6.99e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.48e-12;1!CL:0000167;4.07e-12;1!CL:0000164;4.07e-12;1!CL:0000502;4.07e-12;1!CL:0000172;4.07e-12;1!CL:0000173;4.07e-12;1!CL:0000082;1.19e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.57e-12,1;CL:0000167,3.85e-12,1;CL:0000164,3.85e-12,1;CL:0000502,3.85e-12,1;CL:0000172,3.85e-12,1;CL:0000173,3.85e-12,1;CL:0002351,3.85e-12,1;CL:0000082,1.19e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.55e-21;5!UBERON:0008947;2.95e-18;29!UBERON:0001041;1.25e-17;30!CL:0002351;4.07e-12;1 | |||
|ontology_enrichment_disease=DOID:4430!6.99e-07!1;DOID:3112!9.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1324;3.63e-12;15!DOID:4430;4.07e-12;1!DOID:3905;9.26e-12;9!DOID:0050615;2.02e-11;16!DOID:3908;6.65e-10;5!DOID:1325;2.86e-07;7!DOID:3904;2.86e-07;7!DOID:3910;7.61e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,3.63e-12,15;DOID:4430,3.85e-12,1;DOID:3905,9.09e-12,9;DOID:0050615,2.02e-11,16;DOID:3908,6.51e-10,5;DOID:1325,2.86e-07,7;DOID:3904,2.86e-07,7;DOID:3910,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.31e-18!5;UBERON:0004117!1.31e-18!5;UBERON:0007689!1.31e-18!5;UBERON:0007123!1.31e-18!5;UBERON:0003091!1.31e-18!5;UBERON:0002048!2.30e-15!22;UBERON:0000117!2.30e-15!22;UBERON:0000171!2.30e-15!22;UBERON:0000170!2.30e-15!22;UBERON:0005597!2.30e-15!22;UBERON:0000118!2.30e-15!22;UBERON:0005178!1.11e-14!34;UBERON:0002224!1.11e-14!34;UBERON:0005181!3.29e-14!35;UBERON:0008947!6.09e-13!38;UBERON:0003258!6.09e-13!38;UBERON:0000341!1.91e-12!2;UBERON:0003127!1.13e-11!2;UBERON:0005153!6.59e-11!37;UBERON:0000065!1.42e-10!53;UBERON:0005911!5.16e-09!82;UBERON:0000915!5.78e-09!52;UBERON:0001004!1.11e-08!72;UBERON:0009722!1.65e-08!11;UBERON:0007690!1.65e-08!11;UBERON:0004821!2.55e-08!3;UBERON:0003215!2.55e-08!3;UBERON:0002299!2.55e-08!3;UBERON:0006524!2.55e-08!3;UBERON:0008874!2.55e-08!3;UBERON:0002169!2.55e-08!3;UBERON:0004894!2.55e-08!3;UBERON:0005157!1.72e-07!51;UBERON:0004802!3.12e-07!19;UBERON:0000115!3.12e-07!19;UBERON:0002171!3.95e-07!1;UBERON:0006518!3.95e-07!1;UBERON:0008949!3.95e-07!1;UBERON:0000101!3.95e-07!1;UBERON:0002167!3.95e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;3.04e-24;22!UBERON:0000117;3.04e-24;22!UBERON:0000171;3.04e-24;22!UBERON:0000170;3.04e-24;22!UBERON:0000341;3.49e-23;2!UBERON:0002046;4.55e-21;5!UBERON:0005178;2.70e-13;34!UBERON:0002224;2.70e-13;34!UBERON:0002171;1.18e-12;1!UBERON:0006518;1.18e-12;1!UBERON:0008949;1.18e-12;1!UBERON:0000101;1.18e-12;1!UBERON:0002167;1.18e-12;1!UBERON:0005181;4.56e-12;35!UBERON:0004802;1.19e-09;19!UBERON:0000115;1.19e-09;19!UBERON:0000065;5.27e-09;44!UBERON:0004807;2.33e-08;22!UBERON:0000974;2.34e-08;6!UBERON:0004903;7.61e-07;2!UBERON:0002173;7.61e-07;2!UBERON:0002186;7.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.99e-24,22;UBERON:0000117,2.99e-24,22;UBERON:0000171,2.99e-24,22;UBERON:0000170,2.99e-24,22;UBERON:0005597,2.99e-24,22;UBERON:0000118,2.99e-24,22;UBERON:0000341,3.49e-23,2;UBERON:0002046,4.55e-21,5;UBERON:0004117,4.55e-21,5;UBERON:0007689,4.55e-21,5;UBERON:0007123,4.55e-21,5;UBERON:0003091,4.55e-21,5;UBERON:0005153,2.10e-18,37;UBERON:0005178,1.73e-15,34;UBERON:0002224,1.73e-15,34;UBERON:0005181,4.97e-15,35;UBERON:0005911,5.11e-15,82;UBERON:0005157,2.62e-14,47;UBERON:0008947,8.55e-14,38;UBERON:0003258,8.55e-14,38;UBERON:0002171,1.25e-12,1;UBERON:0006518,1.25e-12,1;UBERON:0008949,1.25e-12,1;UBERON:0000101,1.25e-12,1;UBERON:0002167,1.25e-12,1;UBERON:0000915,6.60e-10,52;UBERON:0009722,6.76e-10,11;UBERON:0007690,6.76e-10,11;UBERON:0004802,1.19e-09,19;UBERON:0000115,1.19e-09,19;UBERON:0000065,1.63e-09,54;UBERON:0001007,9.43e-08,145;UBERON:0001555,9.43e-08,145;UBERON:0007026,9.43e-08,145;UBERON:0004119,7.01e-07,160;UBERON:0000925,7.01e-07,160;UBERON:0006595,7.01e-07,160;UBERON:0004903,7.61e-07,2;UBERON:0002173,7.61e-07,2;UBERON:0002186,7.61e-07,2;UBERON:0001004,9.28e-07,74 | |||
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|short_description=p3@SFTA3 | |||
}} |
Revision as of 04:28, 11 September 2013
Short description: | p3@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SFTA3_5end |
Coexpression cluster: | C1393_thyroid_lung_throat_Alveolar_small_nonsmall_papillary |
Association with transcript: | -84bp_to_ENST00000518529_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.57e-12 | 1 |
peptide hormone secreting cell | 3.85e-12 | 1 |
enteroendocrine cell | 3.85e-12 | 1 |
type D enteroendocrine cell | 3.85e-12 | 1 |
somatostatin secreting cell | 3.85e-12 | 1 |
pancreatic D cell | 3.85e-12 | 1 |
progenitor cell of endocrine pancreas | 3.85e-12 | 1 |
epithelial cell of lung | 1.19e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 3.63e-12 | 15 |
somatostatinoma | 3.85e-12 | 1 |
lung carcinoma | 9.09e-12 | 9 |
respiratory system cancer | 2.02e-11 | 16 |
non-small cell lung carcinoma | 6.51e-10 | 5 |
bronchus cancer | 2.86e-07 | 7 |
bronchogenic carcinoma | 2.86e-07 | 7 |
lung adenocarcinoma | 7.61e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.