FFCP PHASE1:Hg19::chr14:22958441..22958470,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_uc001wel.2_5end|coexpression_cluster_id=C2287|description=CAGE_peak_1_at_uc001wel.2_5end|id=chr14:22958441..22958470,+|ontology_enrichment_celltype=CL:0000542!1.34e-39!53;CL:0000051!1.34e-39!53;CL:0000838!3.39e-38!52;CL:0000791!8.14e-29!18;CL:0000789!8.14e-29!18;CL:0002420!8.14e-29!18;CL:0002419!8.14e-29!18;CL:0000790!8.14e-29!18;CL:0000084!1.57e-21!25;CL:0000827!1.57e-21!25;CL:0002087!2.81e-21!119;CL:0000738!1.13e-20!140;CL:0000625!1.80e-18!11;CL:0002031!1.71e-17!124;CL:0000945!1.43e-14!24;CL:0000826!1.43e-14!24;CL:0000037!4.39e-14!172;CL:0000566!4.39e-14!172;CL:0002032!7.22e-13!165;CL:0000837!7.22e-13!165;CL:0000988!1.55e-12!182;CL:0000624!4.24e-10!6;CL:0000236!1.86e-09!14|ontology_enrichment_celltype_v019=CL:0000791;5.58e-25;18!CL:0000789;5.58e-25;18!CL:0002419;5.58e-25;18!CL:0000945;1.11e-21;24!CL:0000625;8.24e-19;11!CL:0000542;9.47e-19;53!CL:0000084;3.25e-17;25!CL:0000236;1.52e-11;13!CL:0000815;7.50e-08;2!CL:0000792;7.50e-08;2!CL:0002677;7.50e-08;2|ontology_enrichment_celltype_v019_2=CL:0000542,2.29e-37,53;CL:0000051,2.29e-37,53;CL:0000838,3.04e-35,52;CL:0000791,6.92e-25,18;CL:0000789,6.92e-25,18;CL:0002420,6.92e-25,18;CL:0002419,6.92e-25,18;CL:0000790,6.92e-25,18;CL:0000945,8.91e-22,24;CL:0000826,8.91e-22,24;CL:0000625,7.25e-19,11;CL:0000084,3.77e-17,25;CL:0000827,3.77e-17,25;CL:0002087,1.16e-14,115;CL:0000236,3.39e-14,14;CL:0002031,1.72e-11,120;CL:0000738,2.12e-11,136;CL:0000037,4.80e-08,168;CL:0002032,7.30e-08,161;CL:0000837,7.30e-08,161;CL:0000815,8.92e-08,2;CL:0000792,8.92e-08,2;CL:0002677,8.92e-08,2;CL:0000988,2.48e-07,177|ontology_enrichment_development_v019=CL:0000790;5.58e-25;18!CL:0000051;9.47e-19;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.61e-12!15;UBERON:0000179!1.61e-12!15;UBERON:0000463!1.61e-12!15;UBERON:0004177!8.79e-09!7;UBERON:0007023!1.34e-08!115;UBERON:0002370!1.09e-07!4;UBERON:0005058!1.09e-07!4;UBERON:0009113!1.09e-07!4;UBERON:0003295!1.09e-07!4;UBERON:0005562!1.09e-07!4|ontology_enrichment_uberon_v019=UBERON:0000178;6.02e-13;15!UBERON:0000179;6.02e-13;15!UBERON:0000463;6.02e-13;15!UBERON:0002390;1.75e-07;32!UBERON:0002370;2.79e-07;2!UBERON:0005058;2.79e-07;2!UBERON:0009113;2.79e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.35e-13,15;UBERON:0000179,9.35e-13,15;UBERON:0000463,9.35e-13,15;UBERON:0002370,3.48e-08,4;UBERON:0005058,3.48e-08,4;UBERON:0009113,3.48e-08,4;UBERON:0003295,3.48e-08,4;UBERON:0005562,3.48e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8074188368443,5.25443772479653,4.95877922276179,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,2.73069305631066,2.66852776159066,1.28019066769952,0,3.4485146397269,1.98313461835459,1.90810750907073,0,1.17447437874188,0.764546456250458,0,0,0,0.590129310341499,0.393010762749165,1.02800749499755,4.17966238476695,2.60737813306872,2.8406868344084,7.79306913631645,2.89667187901451,2.06224135232386,3.1014745241707,3.79125409271022,1.92136979588513,3.51160238411671,2.46656856905514,2.48715016007264,1.73881851441031,3.11401782640327,4.28065324943541,2.09071047609954,1.81294948316106,0.383220493601921,2.74901956386104,5.06039384039006,2.86708872891687,2.60433381542567,1.90090408889675,2.55977702432214,2.43174561193395,2.49861453104692,3.07810427657222,3.28451198768419,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0281755910744,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,4.58782324285425,2.27858874869665,1.19115887728894,2.05681136543097,2.59389324477087,1.62009431171434,0.79312517629427,0.320472213382419,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,6.12263683571181,0.19924798825107,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.394573622547734,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_uc001wel.2_5end | |||
|coexpression_cluster_id=C2287 | |||
|description=CAGE_peak_1_at_uc001wel.2_5end | |||
|id=chr14:22958441..22958470,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.34e-39!53;CL:0000051!1.34e-39!53;CL:0000838!3.39e-38!52;CL:0000791!8.14e-29!18;CL:0000789!8.14e-29!18;CL:0002420!8.14e-29!18;CL:0002419!8.14e-29!18;CL:0000790!8.14e-29!18;CL:0000084!1.57e-21!25;CL:0000827!1.57e-21!25;CL:0002087!2.81e-21!119;CL:0000738!1.13e-20!140;CL:0000625!1.80e-18!11;CL:0002031!1.71e-17!124;CL:0000945!1.43e-14!24;CL:0000826!1.43e-14!24;CL:0000037!4.39e-14!172;CL:0000566!4.39e-14!172;CL:0002032!7.22e-13!165;CL:0000837!7.22e-13!165;CL:0000988!1.55e-12!182;CL:0000624!4.24e-10!6;CL:0000236!1.86e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.58e-25;18!CL:0000789;5.58e-25;18!CL:0002419;5.58e-25;18!CL:0000945;1.11e-21;24!CL:0000625;8.24e-19;11!CL:0000542;9.47e-19;53!CL:0000084;3.25e-17;25!CL:0000236;1.52e-11;13!CL:0000815;7.50e-08;2!CL:0000792;7.50e-08;2!CL:0002677;7.50e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.29e-37,53;CL:0000051,2.29e-37,53;CL:0000838,3.04e-35,52;CL:0000791,6.92e-25,18;CL:0000789,6.92e-25,18;CL:0002420,6.92e-25,18;CL:0002419,6.92e-25,18;CL:0000790,6.92e-25,18;CL:0000945,8.91e-22,24;CL:0000826,8.91e-22,24;CL:0000625,7.25e-19,11;CL:0000084,3.77e-17,25;CL:0000827,3.77e-17,25;CL:0002087,1.16e-14,115;CL:0000236,3.39e-14,14;CL:0002031,1.72e-11,120;CL:0000738,2.12e-11,136;CL:0000037,4.80e-08,168;CL:0002032,7.30e-08,161;CL:0000837,7.30e-08,161;CL:0000815,8.92e-08,2;CL:0000792,8.92e-08,2;CL:0002677,8.92e-08,2;CL:0000988,2.48e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;5.58e-25;18!CL:0000051;9.47e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.61e-12!15;UBERON:0000179!1.61e-12!15;UBERON:0000463!1.61e-12!15;UBERON:0004177!8.79e-09!7;UBERON:0007023!1.34e-08!115;UBERON:0002370!1.09e-07!4;UBERON:0005058!1.09e-07!4;UBERON:0009113!1.09e-07!4;UBERON:0003295!1.09e-07!4;UBERON:0005562!1.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.02e-13;15!UBERON:0000179;6.02e-13;15!UBERON:0000463;6.02e-13;15!UBERON:0002390;1.75e-07;32!UBERON:0002370;2.79e-07;2!UBERON:0005058;2.79e-07;2!UBERON:0009113;2.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.35e-13,15;UBERON:0000179,9.35e-13,15;UBERON:0000463,9.35e-13,15;UBERON:0002370,3.48e-08,4;UBERON:0005058,3.48e-08,4;UBERON:0009113,3.48e-08,4;UBERON:0003295,3.48e-08,4;UBERON:0005562,3.48e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8074188368443,5.25443772479653,4.95877922276179,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,2.73069305631066,2.66852776159066,1.28019066769952,0,3.4485146397269,1.98313461835459,1.90810750907073,0,1.17447437874188,0.764546456250458,0,0,0,0.590129310341499,0.393010762749165,1.02800749499755,4.17966238476695,2.60737813306872,2.8406868344084,7.79306913631645,2.89667187901451,2.06224135232386,3.1014745241707,3.79125409271022,1.92136979588513,3.51160238411671,2.46656856905514,2.48715016007264,1.73881851441031,3.11401782640327,4.28065324943541,2.09071047609954,1.81294948316106,0.383220493601921,2.74901956386104,5.06039384039006,2.86708872891687,2.60433381542567,1.90090408889675,2.55977702432214,2.43174561193395,2.49861453104692,3.07810427657222,3.28451198768419,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0281755910744,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,4.58782324285425,2.27858874869665,1.19115887728894,2.05681136543097,2.59389324477087,1.62009431171434,0.79312517629427,0.320472213382419,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,6.12263683571181,0.19924798825107,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,4.14094834495046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0,5.07029545245429,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.655678681511872,0,0,0,0,0,0,0,0.657887425858975,0.580120991762195,0,0,0,0,0,0,0,0.315543124386369,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22718928688412,1.86224142887574,0,0,0,0,0,1.68380132536469,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,1.40891655513718,4.16739039994203 | |||
|short_description=p1@uc001wel.2 | |||
}} |
Revision as of 03:51, 11 September 2013
Short description: | p1@uc001wel.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc001wel.2_5end |
Coexpression cluster: | C2287_NK_CD4_CD8_plasma_anaplastic_B_lymphoma |
Association with transcript: | -3bp_to_uc001wel.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.29e-37 | 53 |
common lymphoid progenitor | 2.29e-37 | 53 |
lymphoid lineage restricted progenitor cell | 3.04e-35 | 52 |
mature alpha-beta T cell | 6.92e-25 | 18 |
alpha-beta T cell | 6.92e-25 | 18 |
immature T cell | 6.92e-25 | 18 |
mature T cell | 6.92e-25 | 18 |
immature alpha-beta T cell | 6.92e-25 | 18 |
lymphocyte of B lineage | 8.91e-22 | 24 |
pro-B cell | 8.91e-22 | 24 |
CD8-positive, alpha-beta T cell | 7.25e-19 | 11 |
T cell | 3.77e-17 | 25 |
pro-T cell | 3.77e-17 | 25 |
nongranular leukocyte | 1.16e-14 | 115 |
B cell | 3.39e-14 | 14 |
hematopoietic lineage restricted progenitor cell | 1.72e-11 | 120 |
leukocyte | 2.12e-11 | 136 |
hematopoietic stem cell | 4.80e-08 | 168 |
hematopoietic oligopotent progenitor cell | 7.30e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.30e-08 | 161 |
regulatory T cell | 8.92e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.92e-08 | 2 |
naive regulatory T cell | 8.92e-08 | 2 |
hematopoietic cell | 2.48e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 9.35e-13 | 15 |
haemolymphatic fluid | 9.35e-13 | 15 |
organism substance | 9.35e-13 | 15 |
thymus | 3.48e-08 | 4 |
hemolymphoid system gland | 3.48e-08 | 4 |
thymic region | 3.48e-08 | 4 |
pharyngeal gland | 3.48e-08 | 4 |
thymus primordium | 3.48e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.