FFCP PHASE1:Hg19::chr14:106330458..106330479,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=5538|TSSclassifier=S|UniProt=P01857|association_with_transcript=0bp_to_ENST00000461719,uc001yrs.2,uc001yrx.1,uc001yrz.1,uc001yse.2,uc001ysm.1_5end|coexpression_cluster_id=C282|description=CAGE_peak_1_at_IGHJ4_5end|id=chr14:106330458..106330479,-|ontology_enrichment_celltype=CL:0000945!1.06e-38!24;CL:0000826!1.06e-38!24;CL:0000236!2.17e-30!14;CL:0000542!3.11e-16!53;CL:0000051!3.11e-16!53;CL:0000838!8.74e-15!52;CL:0002087!2.64e-08!119;CL:0000738!3.93e-08!140;CL:0000784!5.82e-08!3;CL:0000037!9.69e-08!172;CL:0000566!9.69e-08!172;CL:0000842!2.17e-07!3;CL:0000988!6.79e-07!182|ontology_enrichment_celltype_v019=CL:0000236;5.39e-49;13!CL:0000945;3.86e-41;24!CL:0000542;4.93e-14;53|ontology_enrichment_celltype_v019_2=CL:0000236,2.42e-45,14;CL:0000945,3.21e-41,24;CL:0000826,3.21e-41,24;CL:0000542,8.53e-20,53;CL:0000051,8.53e-20,53;CL:0000838,2.11e-17,52;CL:0002087,1.89e-08,115;CL:0002031,8.06e-07,120|ontology_enrichment_development_v019=CL:0000051;4.93e-14;53!UBERON:0004872;2.24e-07;7!UBERON:0001045;4.58e-07;1!UBERON:0008801;5.91e-07;1!UBERON:0006298;7.39e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;4.09e-07;1|ontology_enrichment_disease_v019_2=DOID:12603,4.09e-07,1|ontology_enrichment_uberon=UBERON:0007023!1.57e-24!115;UBERON:0000178!9.61e-12!15;UBERON:0000179!9.61e-12!15;UBERON:0000463!9.61e-12!15|ontology_enrichment_uberon_v019=UBERON:0001829;3.75e-12;2!UBERON:0001044;9.97e-09;6!UBERON:0003293;9.97e-09;6!UBERON:0003294;9.97e-09;6!UBERON:0010047;9.97e-09;6!UBERON:0003408;9.97e-09;6!UBERON:0000167;9.97e-09;6!UBERON:0002106;5.44e-08;3!UBERON:0004921;6.30e-08;33!UBERON:0000029;4.33e-07;1!UBERON:0001154;4.58e-07;1!UBERON:0001153;4.58e-07;1!UBERON:0009854;4.58e-07;1!UBERON:0001831;5.91e-07;1!UBERON:0001567;5.91e-07;1!UBERON:0001736;7.39e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-15,114;UBERON:0001829,4.19e-12,2;UBERON:0001044,1.04e-08,6;UBERON:0003293,1.04e-08,6;UBERON:0003294,1.04e-08,6;UBERON:0010047,1.04e-08,6;UBERON:0000167,1.04e-08,6;UBERON:0002106,4.72e-08,3;UBERON:0004854,4.72e-08,3;UBERON:0009034,4.72e-08,3;UBERON:0002095,4.72e-08,3;UBERON:0004782,4.72e-08,3;UBERON:0003281,4.72e-08,3;UBERON:0009664,4.72e-08,3;UBERON:0002296,4.72e-08,3;UBERON:0005602,4.72e-08,3;UBERON:0001179,4.72e-08,3;UBERON:0006293,4.72e-08,3;UBERON:0000029,4.33e-07,1;UBERON:0001154,4.58e-07,1;UBERON:0001153,4.58e-07,1;UBERON:0001045,4.58e-07,1;UBERON:0001831,5.75e-07,1;UBERON:0001567,5.75e-07,1;UBERON:0008801,5.75e-07,1;UBERON:0001736,8.49e-07,1;UBERON:0006298,8.49e-07,1;UBERON:0002372,9.48e-07,1;UBERON:0001961,9.48e-07,1;UBERON:0001744,9.48e-07,1;UBERON:0001735,9.48e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.236132343941038,0,0,0.154816123316076,0,0,0,0.0774672005803016,1.56386155736164,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,4.36910889009705,3.55803701545422,4.26730222566507,6.80673177961221,8.04653415936277,6.61044872784862,6.67837628174755,6.83055562931338,8.80855784056408,9.17455747500549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,0,1.13929437434833,0.238231775457789,0.822724546172388,0,1.08006287447623,0,0,0,0,32.3297524718751,0,0,0,0.59873811429845,0,0.635020748171649,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,10.4987887901836,0,0,1.47701766553283,0,0,0,0,0.690503839458535,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06687918137261,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64095327882873,0,0,0,0,0,0,0,0,0,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,1.49502377594773,0,1.24271716604159,11.9079845234868,0.19761163189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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5538 | |||
|TSSclassifier=S | |||
|UniProt=P01857 | |||
|association_with_transcript=0bp_to_ENST00000461719,uc001yrs.2,uc001yrx.1,uc001yrz.1,uc001yse.2,uc001ysm.1_5end | |||
|coexpression_cluster_id=C282 | |||
|description=CAGE_peak_1_at_IGHJ4_5end | |||
|id=chr14:106330458..106330479,- | |||
|ontology_enrichment_celltype=CL:0000945!1.06e-38!24;CL:0000826!1.06e-38!24;CL:0000236!2.17e-30!14;CL:0000542!3.11e-16!53;CL:0000051!3.11e-16!53;CL:0000838!8.74e-15!52;CL:0002087!2.64e-08!119;CL:0000738!3.93e-08!140;CL:0000784!5.82e-08!3;CL:0000037!9.69e-08!172;CL:0000566!9.69e-08!172;CL:0000842!2.17e-07!3;CL:0000988!6.79e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.39e-49;13!CL:0000945;3.86e-41;24!CL:0000542;4.93e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.42e-45,14;CL:0000945,3.21e-41,24;CL:0000826,3.21e-41,24;CL:0000542,8.53e-20,53;CL:0000051,8.53e-20,53;CL:0000838,2.11e-17,52;CL:0002087,1.89e-08,115;CL:0002031,8.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.93e-14;53!UBERON:0004872;2.24e-07;7!UBERON:0001045;4.58e-07;1!UBERON:0008801;5.91e-07;1!UBERON:0006298;7.39e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;4.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-24!115;UBERON:0000178!9.61e-12!15;UBERON:0000179!9.61e-12!15;UBERON:0000463!9.61e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.75e-12;2!UBERON:0001044;9.97e-09;6!UBERON:0003293;9.97e-09;6!UBERON:0003294;9.97e-09;6!UBERON:0010047;9.97e-09;6!UBERON:0003408;9.97e-09;6!UBERON:0000167;9.97e-09;6!UBERON:0002106;5.44e-08;3!UBERON:0004921;6.30e-08;33!UBERON:0000029;4.33e-07;1!UBERON:0001154;4.58e-07;1!UBERON:0001153;4.58e-07;1!UBERON:0009854;4.58e-07;1!UBERON:0001831;5.91e-07;1!UBERON:0001567;5.91e-07;1!UBERON:0001736;7.39e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-15,114;UBERON:0001829,4.19e-12,2;UBERON:0001044,1.04e-08,6;UBERON:0003293,1.04e-08,6;UBERON:0003294,1.04e-08,6;UBERON:0010047,1.04e-08,6;UBERON:0000167,1.04e-08,6;UBERON:0002106,4.72e-08,3;UBERON:0004854,4.72e-08,3;UBERON:0009034,4.72e-08,3;UBERON:0002095,4.72e-08,3;UBERON:0004782,4.72e-08,3;UBERON:0003281,4.72e-08,3;UBERON:0009664,4.72e-08,3;UBERON:0002296,4.72e-08,3;UBERON:0005602,4.72e-08,3;UBERON:0001179,4.72e-08,3;UBERON:0006293,4.72e-08,3;UBERON:0000029,4.33e-07,1;UBERON:0001154,4.58e-07,1;UBERON:0001153,4.58e-07,1;UBERON:0001045,4.58e-07,1;UBERON:0001831,5.75e-07,1;UBERON:0001567,5.75e-07,1;UBERON:0008801,5.75e-07,1;UBERON:0001736,8.49e-07,1;UBERON:0006298,8.49e-07,1;UBERON:0002372,9.48e-07,1;UBERON:0001961,9.48e-07,1;UBERON:0001744,9.48e-07,1;UBERON:0001735,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.236132343941038,0,0,0.154816123316076,0,0,0,0.0774672005803016,1.56386155736164,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,4.36910889009705,3.55803701545422,4.26730222566507,6.80673177961221,8.04653415936277,6.61044872784862,6.67837628174755,6.83055562931338,8.80855784056408,9.17455747500549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,0,1.13929437434833,0.238231775457789,0.822724546172388,0,1.08006287447623,0,0,0,0,32.3297524718751,0,0,0,0.59873811429845,0,0.635020748171649,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,10.4987887901836,0,0,1.47701766553283,0,0,0,0,0.690503839458535,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06687918137261,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64095327882873,0,0,0,0,0,0,0,0,0,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,1.49502377594773,0,1.24271716604159,11.9079845234868,0.197611631897944,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,0,0,0,0,0,0,7.67560873600055,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,2.58136415292167,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55001127296545,0.218559560503957,0,0,0,0,0,0,0,6.6728581765696,1.93373663920732,0,0,0,0,0,6.42220996766357,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,3.62497769231668,0,0.258355639344024,0.124149428591716,0,0,0,1.08858373948481,0,4.98405192307948,1.93649954560226,0,0,0,0,0,0,0,0,0.665756774185513,4.6292972525936,0 | |||
|short_description=p1@IGHJ4 | |||
}} |
Revision as of 03:36, 11 September 2013
Short description: | p1@IGHJ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IGHJ4_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | 0bp_to_ENST00000461719, uc001yrs.2, uc001yrx.1, uc001yrz.1, uc001yse.2, uc001ysm.1_5end |
EntrezGene: | NA |
HGNC: | 5538 |
UniProt: | P01857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.42e-45 | 14 |
lymphocyte of B lineage | 3.21e-41 | 24 |
pro-B cell | 3.21e-41 | 24 |
lymphocyte | 8.53e-20 | 53 |
common lymphoid progenitor | 8.53e-20 | 53 |
lymphoid lineage restricted progenitor cell | 2.11e-17 | 52 |
nongranular leukocyte | 1.89e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-15 | 114 |
major salivary gland | 4.19e-12 | 2 |
saliva-secreting gland | 1.04e-08 | 6 |
gland of oral region | 1.04e-08 | 6 |
gland of foregut | 1.04e-08 | 6 |
oral gland | 1.04e-08 | 6 |
oral cavity | 1.04e-08 | 6 |
spleen | 4.72e-08 | 3 |
gastrointestinal system mesentery | 4.72e-08 | 3 |
stomach region | 4.72e-08 | 3 |
mesentery | 4.72e-08 | 3 |
gastrointestinal system serosa | 4.72e-08 | 3 |
mesentery of stomach | 4.72e-08 | 3 |
gut mesentery | 4.72e-08 | 3 |
dorsal mesentery | 4.72e-08 | 3 |
dorsal mesogastrium | 4.72e-08 | 3 |
peritoneal cavity | 4.72e-08 | 3 |
spleen primordium | 4.72e-08 | 3 |
lymph node | 4.33e-07 | 1 |
vermiform appendix | 4.58e-07 | 1 |
caecum | 4.58e-07 | 1 |
midgut | 4.58e-07 | 1 |
parotid gland | 5.75e-07 | 1 |
cheek | 5.75e-07 | 1 |
parotid gland primordium | 5.75e-07 | 1 |
submandibular gland | 8.49e-07 | 1 |
submandibular gland primordium | 8.49e-07 | 1 |
tonsil | 9.48e-07 | 1 |
mucosa-associated lymphoid tissue | 9.48e-07 | 1 |
lymphoid tissue | 9.48e-07 | 1 |
tonsillar ring | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.09e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.