FFCP PHASE1:Hg19::chr14:106114704..106114716,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=175bp_to_ENST00000460164_5end|coexpression_cluster_id=C2281|description=CAGE_peak_1_at_ENST00000460164_5end|id=chr14:106114704..106114716,-|ontology_enrichment_celltype=CL:0000236!1.99e-39!14;CL:0000945!4.29e-26!24;CL:0000826!4.29e-26!24;CL:0000838!1.18e-12!52;CL:0000542!2.32e-12!53;CL:0000051!2.32e-12!53;CL:0002087!5.37e-12!119;CL:0000738!1.26e-10!140;CL:0002031!6.06e-09!124;CL:0000037!9.34e-08!172;CL:0000566!9.34e-08!172;CL:0000988!4.51e-07!182;CL:0000842!7.17e-07!3|ontology_enrichment_celltype_v019=CL:0000236;2.24e-101;13!CL:0000945;2.33e-54;24!CL:0000542;4.23e-23;53|ontology_enrichment_celltype_v019_2=CL:0000236,3.95e-94,14;CL:0000945,2.11e-54,24;CL:0000826,2.11e-54,24;CL:0000838,3.48e-29,52;CL:0000542,1.32e-28,53;CL:0000051,1.32e-28,53;CL:0002087,3.58e-12,115;CL:0002031,1.34e-11,120;CL:0000738,4.84e-10,136;CL:0002032,3.21e-08,161;CL:0000837,3.21e-08,161;CL:0000037,8.33e-08,168;CL:0000988,2.54e-07,177|ontology_enrichment_development_v019=CL:0000051;4.23e-23;53!UBERON:0001045;2.91e-12;1!UBERON:0004872;2.95e-07;7!UBERON:0006965;5.26e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!3.49e-18!15;UBERON:0000179!3.49e-18!15;UBERON:0000463!3.49e-18!15;UBERON:0004177!3.67e-15!7;UBERON:0002106!1.14e-13!3;UBERON:0004854!1.14e-13!3;UBERON:0009034!1.14e-13!3;UBERON:0002095!1.14e-13!3;UBERON:0004782!1.14e-13!3;UBERON:0003281!1.14e-13!3;UBERON:0009664!1.14e-13!3;UBERON:0002296!1.14e-13!3;UBERON:0005602!1.14e-13!3;UBERON:0001179!1.14e-13!3;UBERON:0006293!1.14e-13!3;UBERON:0002390!4.90e-11!102;UBERON:0003061!4.90e-11!102;UBERON:0002193!5.38e-11!112|ontology_enrichment_uberon_v019=UBERON:0002372;2.33e-12;1!UBERON:0001961;2.33e-12;1!UBERON:0001744;2.33e-12;1!UBERON:0001042;2.33e-12;1!UBERON:0001735;2.33e-12;1!UBERON:0001154;2.91e-12;1!UBERON:0001153;2.91e-12;1!UBERON:0009854;2.91e-12;1!UBERON:0006562;8.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.20e-12,1;UBERON:0001961,2.20e-12,1;UBERON:0001744,2.20e-12,1;UBERON:0001735,2.20e-12,1;UBERON:0001154,3.08e-12,1;UBERON:0001153,3.08e-12,1;UBERON:0001045,3.08e-12,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,8.19207916893197,6.22656477704488,4.69403244823158,4.00395987036012,6.8970292794538,10.5767179645578,2.86216126360609,1.70763890732835,28.1873850898051,3.05818582500183,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,0.569647187174163,0.952927101831156,1.23408681925858,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5619033195968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03382309777839,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,3.30025059771479,0.0717222053926763,0,0,0,0,0,0,0,0,0,10.0636896795513,0|short_description=p1@ENST00000460164}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=175bp_to_ENST00000460164_5end | |||
|coexpression_cluster_id=C2281 | |||
|description=CAGE_peak_1_at_ENST00000460164_5end | |||
|id=chr14:106114704..106114716,- | |||
|ontology_enrichment_celltype=CL:0000236!1.99e-39!14;CL:0000945!4.29e-26!24;CL:0000826!4.29e-26!24;CL:0000838!1.18e-12!52;CL:0000542!2.32e-12!53;CL:0000051!2.32e-12!53;CL:0002087!5.37e-12!119;CL:0000738!1.26e-10!140;CL:0002031!6.06e-09!124;CL:0000037!9.34e-08!172;CL:0000566!9.34e-08!172;CL:0000988!4.51e-07!182;CL:0000842!7.17e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.24e-101;13!CL:0000945;2.33e-54;24!CL:0000542;4.23e-23;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.95e-94,14;CL:0000945,2.11e-54,24;CL:0000826,2.11e-54,24;CL:0000838,3.48e-29,52;CL:0000542,1.32e-28,53;CL:0000051,1.32e-28,53;CL:0002087,3.58e-12,115;CL:0002031,1.34e-11,120;CL:0000738,4.84e-10,136;CL:0002032,3.21e-08,161;CL:0000837,3.21e-08,161;CL:0000037,8.33e-08,168;CL:0000988,2.54e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.23e-23;53!UBERON:0001045;2.91e-12;1!UBERON:0004872;2.95e-07;7!UBERON:0006965;5.26e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.49e-18!15;UBERON:0000179!3.49e-18!15;UBERON:0000463!3.49e-18!15;UBERON:0004177!3.67e-15!7;UBERON:0002106!1.14e-13!3;UBERON:0004854!1.14e-13!3;UBERON:0009034!1.14e-13!3;UBERON:0002095!1.14e-13!3;UBERON:0004782!1.14e-13!3;UBERON:0003281!1.14e-13!3;UBERON:0009664!1.14e-13!3;UBERON:0002296!1.14e-13!3;UBERON:0005602!1.14e-13!3;UBERON:0001179!1.14e-13!3;UBERON:0006293!1.14e-13!3;UBERON:0002390!4.90e-11!102;UBERON:0003061!4.90e-11!102;UBERON:0002193!5.38e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.33e-12;1!UBERON:0001961;2.33e-12;1!UBERON:0001744;2.33e-12;1!UBERON:0001042;2.33e-12;1!UBERON:0001735;2.33e-12;1!UBERON:0001154;2.91e-12;1!UBERON:0001153;2.91e-12;1!UBERON:0009854;2.91e-12;1!UBERON:0006562;8.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.20e-12,1;UBERON:0001961,2.20e-12,1;UBERON:0001744,2.20e-12,1;UBERON:0001735,2.20e-12,1;UBERON:0001154,3.08e-12,1;UBERON:0001153,3.08e-12,1;UBERON:0001045,3.08e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,8.19207916893197,6.22656477704488,4.69403244823158,4.00395987036012,6.8970292794538,10.5767179645578,2.86216126360609,1.70763890732835,28.1873850898051,3.05818582500183,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,0.569647187174163,0.952927101831156,1.23408681925858,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48655523978033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5619033195968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03382309777839,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,3.30025059771479,0.0717222053926763,0,0,0,0,0,0,0,0,0,10.0636896795513,0 | |||
|short_description=p1@ENST00000460164 | |||
}} |
Revision as of 03:33, 11 September 2013
Short description: | p1@ENST00000460164 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000460164_5end |
Coexpression cluster: | C2281_hairy_CD19_b_vein_appendix_lymph_tonsil |
Association with transcript: | 175bp_to_ENST00000460164_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.95e-94 | 14 |
lymphocyte of B lineage | 2.11e-54 | 24 |
pro-B cell | 2.11e-54 | 24 |
lymphoid lineage restricted progenitor cell | 3.48e-29 | 52 |
lymphocyte | 1.32e-28 | 53 |
common lymphoid progenitor | 1.32e-28 | 53 |
nongranular leukocyte | 3.58e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.34e-11 | 120 |
leukocyte | 4.84e-10 | 136 |
hematopoietic oligopotent progenitor cell | 3.21e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.21e-08 | 161 |
hematopoietic stem cell | 8.33e-08 | 168 |
hematopoietic cell | 2.54e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.20e-12 | 1 |
mucosa-associated lymphoid tissue | 2.20e-12 | 1 |
lymphoid tissue | 2.20e-12 | 1 |
tonsillar ring | 2.20e-12 | 1 |
vermiform appendix | 3.08e-12 | 1 |
caecum | 3.08e-12 | 1 |
midgut | 3.08e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.