FFCP PHASE1:Hg19::chr13:80975508..80975547,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C282|description=CAGE_peak_at_chr13:80975508..80975547,+|id=chr13:80975508..80975547,+|ontology_enrichment_celltype=CL:0000945!6.73e-23!24;CL:0000826!6.73e-23!24;CL:0000236!1.06e-19!14;CL:0000542!2.32e-15!53;CL:0000051!2.32e-15!53;CL:0000838!1.08e-13!52;CL:0002087!8.66e-08!119;CL:0002031!3.45e-07!124|ontology_enrichment_celltype_v019=CL:0000945;2.01e-43;24!CL:0000236;1.35e-31;13!CL:0000785;4.44e-18;1!CL:0000819;4.44e-18;1!CL:0000542;2.30e-15;53|ontology_enrichment_celltype_v019_2=CL:0000945,2.12e-43,24;CL:0000826,2.12e-43,24;CL:0000236,2.48e-29,14;CL:0000542,1.19e-24,53;CL:0000051,1.19e-24,53;CL:0000838,8.01e-20,52;CL:0000819,4.44e-18,1;CL:0002087,6.62e-11,115;CL:0000785,1.03e-09,2;CL:0000955,1.03e-09,2;CL:0000818,1.03e-09,2;CL:0000954,1.03e-09,2;CL:0000816,1.03e-09,2;CL:0000738,4.07e-09,136;CL:0002031,3.41e-08,120;CL:0002032,1.38e-07,161;CL:0000837,1.38e-07,161;CL:0000037,3.09e-07,168;CL:0000817,6.88e-07,3;CL:0000988,7.92e-07,177|ontology_enrichment_development_v019=UBERON:0000358;1.12e-17;1!UBERON:0001045;1.57e-17;1!CL:0000051;2.30e-15;53!CL:0000954;1.03e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;2.66e-18;1!DOID:0060073;4.44e-18;1!DOID:8675;4.44e-18;1|ontology_enrichment_disease_v019_2=DOID:12603,2.66e-18,1;DOID:0060073,4.44e-18,1;DOID:8675,4.44e-18,1|ontology_enrichment_uberon=UBERON:0002106!2.27e-11!3;UBERON:0004854!2.27e-11!3;UBERON:0009034!2.27e-11!3;UBERON:0002095!2.27e-11!3;UBERON:0004782!2.27e-11!3;UBERON:0003281!2.27e-11!3;UBERON:0009664!2.27e-11!3;UBERON:0002296!2.27e-11!3;UBERON:0005602!2.27e-11!3;UBERON:0001179!2.27e-11!3;UBERON:0006293!2.27e-11!3;UBERON:0004177!2.30e-08!7|ontology_enrichment_uberon_v019=UBERON:0001154;1.57e-17;1!UBERON:0001153;1.57e-17;1!UBERON:0009854;1.57e-17;1!UBERON:0002106;8.15e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.44e-17,1;UBERON:0001153,1.44e-17,1;UBERON:0001045,1.44e-17,1;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25264782077874,6.65014774544561,9.05173985107311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.09227722252426,3.55803701545422,0,0.400395987036012,0.574752439954483,0.661044872784862,2.86216126360609,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0,19.8809397384519,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29819156862664,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.187967835959707,3.86747327841463,0.999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.2507075392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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C282 | |||
|description=CAGE_peak_at_chr13:80975508..80975547,+ | |||
|id=chr13:80975508..80975547,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.73e-23!24;CL:0000826!6.73e-23!24;CL:0000236!1.06e-19!14;CL:0000542!2.32e-15!53;CL:0000051!2.32e-15!53;CL:0000838!1.08e-13!52;CL:0002087!8.66e-08!119;CL:0002031!3.45e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.01e-43;24!CL:0000236;1.35e-31;13!CL:0000785;4.44e-18;1!CL:0000819;4.44e-18;1!CL:0000542;2.30e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.12e-43,24;CL:0000826,2.12e-43,24;CL:0000236,2.48e-29,14;CL:0000542,1.19e-24,53;CL:0000051,1.19e-24,53;CL:0000838,8.01e-20,52;CL:0000819,4.44e-18,1;CL:0002087,6.62e-11,115;CL:0000785,1.03e-09,2;CL:0000955,1.03e-09,2;CL:0000818,1.03e-09,2;CL:0000954,1.03e-09,2;CL:0000816,1.03e-09,2;CL:0000738,4.07e-09,136;CL:0002031,3.41e-08,120;CL:0002032,1.38e-07,161;CL:0000837,1.38e-07,161;CL:0000037,3.09e-07,168;CL:0000817,6.88e-07,3;CL:0000988,7.92e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.12e-17;1!UBERON:0001045;1.57e-17;1!CL:0000051;2.30e-15;53!CL:0000954;1.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;2.66e-18;1!DOID:0060073;4.44e-18;1!DOID:8675;4.44e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.66e-18,1;DOID:0060073,4.44e-18,1;DOID:8675,4.44e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.27e-11!3;UBERON:0004854!2.27e-11!3;UBERON:0009034!2.27e-11!3;UBERON:0002095!2.27e-11!3;UBERON:0004782!2.27e-11!3;UBERON:0003281!2.27e-11!3;UBERON:0009664!2.27e-11!3;UBERON:0002296!2.27e-11!3;UBERON:0005602!2.27e-11!3;UBERON:0001179!2.27e-11!3;UBERON:0006293!2.27e-11!3;UBERON:0004177!2.30e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.57e-17;1!UBERON:0001153;1.57e-17;1!UBERON:0009854;1.57e-17;1!UBERON:0002106;8.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.44e-17,1;UBERON:0001153,1.44e-17,1;UBERON:0001045,1.44e-17,1;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25264782077874,6.65014774544561,9.05173985107311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.09227722252426,3.55803701545422,0,0.400395987036012,0.574752439954483,0.661044872784862,2.86216126360609,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0,19.8809397384519,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29819156862664,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.187967835959707,3.86747327841463,0.999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0,0.620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr13:80975508..80975547,+ | |||
}} |
Revision as of 02:54, 11 September 2013
Short description: | p@chr13:80975508..80975547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:80975508..80975547, + |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.12e-43 | 24 |
pro-B cell | 2.12e-43 | 24 |
B cell | 2.48e-29 | 14 |
lymphocyte | 1.19e-24 | 53 |
common lymphoid progenitor | 1.19e-24 | 53 |
lymphoid lineage restricted progenitor cell | 8.01e-20 | 52 |
B-1 B cell | 4.44e-18 | 1 |
nongranular leukocyte | 6.62e-11 | 115 |
mature B cell | 1.03e-09 | 2 |
pre-B-II cell | 1.03e-09 | 2 |
transitional stage B cell | 1.03e-09 | 2 |
small pre-B-II cell | 1.03e-09 | 2 |
immature B cell | 1.03e-09 | 2 |
leukocyte | 4.07e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 3.41e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-07 | 161 |
hematopoietic stem cell | 3.09e-07 | 168 |
precursor B cell | 6.88e-07 | 3 |
hematopoietic cell | 7.92e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.44e-17 | 1 |
caecum | 1.44e-17 | 1 |
midgut | 1.44e-17 | 1 |
spleen | 7.70e-07 | 3 |
gastrointestinal system mesentery | 7.70e-07 | 3 |
stomach region | 7.70e-07 | 3 |
mesentery | 7.70e-07 | 3 |
gastrointestinal system serosa | 7.70e-07 | 3 |
mesentery of stomach | 7.70e-07 | 3 |
gut mesentery | 7.70e-07 | 3 |
dorsal mesentery | 7.70e-07 | 3 |
dorsal mesogastrium | 7.70e-07 | 3 |
peritoneal cavity | 7.70e-07 | 3 |
spleen primordium | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.66e-18 | 1 |
lymphatic system cancer | 4.44e-18 | 1 |
lymphosarcoma | 4.44e-18 | 1 |
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