FFCP PHASE1:Hg19::chr13:76363081..76363091,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6646|TSSclassifier=S|UniProt=E9PLU6|association_with_transcript=107bp_to_ENST00000497947_5end|coexpression_cluster_id=C1190|description=CAGE_peak_29_at_LMO7_5end|id=chr13:76363081..76363091,+|ontology_enrichment_celltype=CL:0000188!2.70e-15!9;CL:0000515!6.37e-08!4|ontology_enrichment_celltype_v019=CL:0000188;2.36e-26;9!CL:0000680;2.26e-15;7!CL:0002573;5.24e-10;2!CL:0000594;1.33e-09;3!CL:0000222;2.90e-08;1!CL:0000228;3.96e-08;1!CL:0002372;3.96e-08;1!CL:0000056;1.03e-07;4|ontology_enrichment_celltype_v019_2=CL:0000188,3.16e-26,9;CL:0002573,6.00e-10,2;CL:0000594,1.66e-09,3;CL:0000228,3.58e-08,1;CL:0002372,3.58e-08,1;CL:0000515,9.01e-08,4|ontology_enrichment_development_v019=UBERON:0008947;5.66e-17;29!CL:0000515;1.03e-07;4|ontology_enrichment_disease=DOID:305!2.45e-10!106;DOID:0050687!2.94e-08!143;DOID:14566!8.41e-07!239|ontology_enrichment_disease_v019=DOID:3111;2.44e-08;1!DOID:3603;2.44e-08;1|ontology_enrichment_disease_v019_2=DOID:3111,2.71e-08,1;DOID:3603,2.71e-08,1;DOID:305,4.42e-08,106;DOID:0050687,1.64e-07,143;DOID:14566,4.19e-07,239|ontology_enrichment_uberon=UBERON:0001737!7.93e-17!9;UBERON:0001557!2.30e-08!19;UBERON:0000490!1.95e-07!138|ontology_enrichment_uberon_v019=UBERON:0001737;1.17e-57;9!UBERON:0001557;1.17e-57;9!UBERON:0001134;6.91e-26;16!UBERON:0002036;6.91e-26;16!UBERON:0002385;2.30e-12;31!UBERON:0001015;2.30e-12;31!UBERON:0000383;2.30e-12;31!UBERON:0000072;2.57e-12;37!UBERON:0000065;2.23e-10;44|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.11e-58,9;UBERON:0001557,9.98e-27,19;UBERON:0008947,1.13e-12,38;UBERON:0003258,1.13e-12,38;UBERON:0000072,5.60e-10,47;UBERON:0000065,1.67e-08,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0.735326160691737,0.81014194788176,0.267899184852239,0.44905874525234,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0,0,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24782920075703,2.52877035117153,1.68707720918437,1.43382164552112,1.30727666455444,1.89816495288877,1.75280700608214,1.96221465125346,4.23221872641029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.579125226670317,0.410952645100767,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.552485933615378,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,4.73686519631398,0.154048617114644,0.614014698904518,1.10269257987624,0.107420244868274,1.0151168573996,1.70453254832202,9.79352392114111,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,1.16107597546902,1.31560770755134,0.656923656425674,0.193978032976839,0,0,0,0,0,0.391102765469606,0.320635281006135,0,0,0,0,0,4.32164393964449,0.248505071130865,0.471388069233591,2.03856309110421,0.732219924186332,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,2.90294345488599,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,9.60066635191569,0,0.336749488765919,3.78554694685953,0.963099152036517,0.214441591374926,0,0,0,0.489473409012935,0,0.308801447160972,0,0,0,0.168942440653073,0,1.72715170865599,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,4.22624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.818859587550484,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=S | |||
|UniProt=E9PLU6 | |||
|association_with_transcript=107bp_to_ENST00000497947_5end | |||
|coexpression_cluster_id=C1190 | |||
|description=CAGE_peak_29_at_LMO7_5end | |||
|id=chr13:76363081..76363091,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.70e-15!9;CL:0000515!6.37e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.36e-26;9!CL:0000680;2.26e-15;7!CL:0002573;5.24e-10;2!CL:0000594;1.33e-09;3!CL:0000222;2.90e-08;1!CL:0000228;3.96e-08;1!CL:0002372;3.96e-08;1!CL:0000056;1.03e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.16e-26,9;CL:0002573,6.00e-10,2;CL:0000594,1.66e-09,3;CL:0000228,3.58e-08,1;CL:0002372,3.58e-08,1;CL:0000515,9.01e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.66e-17;29!CL:0000515;1.03e-07;4 | |||
|ontology_enrichment_disease=DOID:305!2.45e-10!106;DOID:0050687!2.94e-08!143;DOID:14566!8.41e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.44e-08;1!DOID:3603;2.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.71e-08,1;DOID:3603,2.71e-08,1;DOID:305,4.42e-08,106;DOID:0050687,1.64e-07,143;DOID:14566,4.19e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.93e-17!9;UBERON:0001557!2.30e-08!19;UBERON:0000490!1.95e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.17e-57;9!UBERON:0001557;1.17e-57;9!UBERON:0001134;6.91e-26;16!UBERON:0002036;6.91e-26;16!UBERON:0002385;2.30e-12;31!UBERON:0001015;2.30e-12;31!UBERON:0000383;2.30e-12;31!UBERON:0000072;2.57e-12;37!UBERON:0000065;2.23e-10;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.11e-58,9;UBERON:0001557,9.98e-27,19;UBERON:0008947,1.13e-12,38;UBERON:0003258,1.13e-12,38;UBERON:0000072,5.60e-10,47;UBERON:0000065,1.67e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0.735326160691737,0.81014194788176,0.267899184852239,0.44905874525234,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0,0,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24782920075703,2.52877035117153,1.68707720918437,1.43382164552112,1.30727666455444,1.89816495288877,1.75280700608214,1.96221465125346,4.23221872641029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.579125226670317,0.410952645100767,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.552485933615378,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,4.73686519631398,0.154048617114644,0.614014698904518,1.10269257987624,0.107420244868274,1.0151168573996,1.70453254832202,9.79352392114111,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,1.16107597546902,1.31560770755134,0.656923656425674,0.193978032976839,0,0,0,0,0,0.391102765469606,0.320635281006135,0,0,0,0,0,4.32164393964449,0.248505071130865,0.471388069233591,2.03856309110421,0.732219924186332,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,2.90294345488599,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,9.60066635191569,0,0.336749488765919,3.78554694685953,0.963099152036517,0.214441591374926,0,0,0,0.489473409012935,0,0.308801447160972,0,0,0,0.168942440653073,0,1.72715170865599,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,4.22624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.818859587550484,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0.590969204419841,0,0,0,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0,0,5.73732298598512,0,0,0,0,0,2.12997601315018,2.38597533325642,0,0.22910686854405,0.31020638566432,0,0,0,0,0.647428837187895,0.307988420568741,5.799072156691,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.952257725854961,0,0,0.224263725161227,0,0,0,0.684466602170562,0,0,0,0,0.533636729388577,1.9307228228694,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p29@LMO7 | |||
}} |
Revision as of 02:47, 11 September 2013
Short description: | p29@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 107bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.16e-26 | 9 |
Schwann cell | 6.00e-10 | 2 |
skeletal muscle satellite cell | 1.66e-09 | 3 |
multinucleate cell | 3.58e-08 | 1 |
myotube | 3.58e-08 | 1 |
skeletal muscle myoblast | 9.01e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.11e-58 | 9 |
upper respiratory tract | 9.98e-27 | 19 |
respiratory primordium | 1.13e-12 | 38 |
endoderm of foregut | 1.13e-12 | 38 |
segment of respiratory tract | 5.60e-10 | 47 |
respiratory tract | 1.67e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.71e-08 | 1 |
mucinous cystadenocarcinoma | 2.71e-08 | 1 |
carcinoma | 4.42e-08 | 106 |
cell type cancer | 1.64e-07 | 143 |
disease of cellular proliferation | 4.19e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.