FFCP PHASE1:Hg19::chr13:76363052..76363077,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6646|TSSclassifier=S|UniProt=E9PLU6|association_with_transcript=78bp_to_ENST00000497947_5end|coexpression_cluster_id=C1190|description=CAGE_peak_7_at_LMO7_5end|id=chr13:76363052..76363077,+|ontology_enrichment_celltype=CL:0000188!3.00e-10!9;CL:0002620!5.07e-09!23|ontology_enrichment_celltype_v019=CL:0000188;8.63e-14;9!CL:0000680;5.39e-13;7!CL:0000056;1.01e-10;4!CL:0000515;2.19e-08;3|ontology_enrichment_celltype_v019_2=CL:0000188,9.26e-14,9;CL:0000515,1.17e-10,4|ontology_enrichment_development_v019=CL:0000515;1.01e-10;4!UBERON:0008947;8.27e-09;29|ontology_enrichment_disease=DOID:305!7.94e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.92e-08,106|ontology_enrichment_uberon=UBERON:0001737!1.52e-11!9;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0001007!5.44e-07!155;UBERON:0001555!5.44e-07!155;UBERON:0007026!5.44e-07!155;UBERON:0001557!5.69e-07!19;UBERON:0004119!7.92e-07!169;UBERON:0000925!7.92e-07!169;UBERON:0006595!7.92e-07!169|ontology_enrichment_uberon_v019=UBERON:0001134;1.31e-24;16!UBERON:0002036;1.31e-24;16!UBERON:0001737;1.24e-23;9!UBERON:0001557;1.24e-23;9!UBERON:0002385;5.52e-11;31!UBERON:0001015;5.52e-11;31!UBERON:0000383;5.52e-11;31|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.30e-23,9;UBERON:0001557,7.83e-15,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.675668882899933,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,1.22492502752936,0.122834317311768,0.516628905878827,0,0,0,0,0.505008341862199,0.125118519871964,1.6623846929051,0.438977620880838,0,0,0,0.179389635688862,0.427114777637135,0.423863802319124,0.600182192168805,3.91599611106068,0.772921620136887,0.558350568994769,0,0.0974370051611986,0.252433774244115,0.460249493211497,0.323292113637624,0.355009592516614,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1743848034266,11.1265895451547,14.7016728228924,12.2426309732957,10.8939722046203,9.01628352622167,11.5954925017741,10.203516186518,16.1593805917484,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,7.13184525203592,6.22559618670591,2.05476322550383,9.49023105171447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,3.5622281931914,0,3.0882908142977,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0.308419387605311,0.355123450626254,0.821271560138091,3.11552657510173,0.232420756919918,0,0,1.10497186723076,2.75554675595056,0.910455840033585,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,1.55668090191184,1.32015199872941,0,0,0,18.4641071937953,0.616194468458578,3.22357716924872,5.65129947186575,0.537101224341368,4.35050081742686,8.43743611419399,56.0011504217978,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,1.116475108079,1.89827654831236,0,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,1.77449884830381,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,1.04980416073495,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,1.53580351049616,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.945550727071745,0,0,0,0,0,0,0,0,0,1.52513848926586,0,0.0769502585037971,2.50672522863403,0,0.0897576444097721,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0.284609546029793,0.138674673013139,0.173559738335131,0.685946781900644,0,0.698906672968121,0,5.32159822089968,4.45844834225732,4.92692742319255,0.387956065953678,0.0882561266915003,0.677942222341597,0,0,0,0.782205530939212,1.84365286578528,0,0.19980960958213,0,0,0,20.8879457082817,0,1.88555227693436,7.746539746196,7.00839070292632,0,0,0,0,0,0,0,0.837847203816763,2.7499250881402,3.58936512288407,0,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0.137539436597234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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |||
|TSSclassifier=S | |||
|UniProt=E9PLU6 | |||
|association_with_transcript=78bp_to_ENST00000497947_5end | |||
|coexpression_cluster_id=C1190 | |||
|description=CAGE_peak_7_at_LMO7_5end | |||
|id=chr13:76363052..76363077,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.00e-10!9;CL:0002620!5.07e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0000188;8.63e-14;9!CL:0000680;5.39e-13;7!CL:0000056;1.01e-10;4!CL:0000515;2.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,9.26e-14,9;CL:0000515,1.17e-10,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.01e-10;4!UBERON:0008947;8.27e-09;29 | |||
|ontology_enrichment_disease=DOID:305!7.94e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.92e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.52e-11!9;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0001007!5.44e-07!155;UBERON:0001555!5.44e-07!155;UBERON:0007026!5.44e-07!155;UBERON:0001557!5.69e-07!19;UBERON:0004119!7.92e-07!169;UBERON:0000925!7.92e-07!169;UBERON:0006595!7.92e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.31e-24;16!UBERON:0002036;1.31e-24;16!UBERON:0001737;1.24e-23;9!UBERON:0001557;1.24e-23;9!UBERON:0002385;5.52e-11;31!UBERON:0001015;5.52e-11;31!UBERON:0000383;5.52e-11;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.30e-23,9;UBERON:0001557,7.83e-15,19 | |||
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| |||
|short_description=p7@LMO7 | |||
}} |
Revision as of 02:47, 11 September 2013
Short description: | p7@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 78bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 9.26e-14 | 9 |
skeletal muscle myoblast | 1.17e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.30e-23 | 9 |
upper respiratory tract | 7.83e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.92e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.