FFCP PHASE1:Hg19::chr13:28867552..28867558,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255967|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29991|TSSclassifier=N|UniProt=Q6UXP2|association_with_transcript=-275bp_to_AY358261_5end|description=CAGE_peak_10_at_PAN3_5end|id=chr13:28867552..28867558,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;1.00e-10;3|ontology_enrichment_celltype_v019_2=CL:0000775,5.87e-11,3|ontology_enrichment_development_v019=UBERON:0006215;1.96e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005795;1.90e-08;1!UBERON:0001874;1.90e-08;1!UBERON:0007195;1.90e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001874,1.27e-08,1;UBERON:0007195,3.06e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0.993374274723366,0.57470412614962,0.393553906568396,0,0,0.928896739896456,0,0.30120591877825,0,0.0774672005803016,0.568676929949686,0,0,0.200544447470142,0.651032612147555,0,0.647787332037959,0,0.726991193897824,0,0,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0,1.03423704220986,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,1.25624332628372,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0,0.628975936525128,0,0,0,0,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,2.34894875748376,1.14681968437569,0,0,0.526768169550154,0.590129310341499,0.786021525498329,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0.812411591295047,0.384273959177026,0.520237390239513,0.328875809207352,1.10540007114339,0,0,0.535081656179426,0,0.226618685395132,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0.403213486449465,0.534880391567015,1.15859523106239,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.252433774244115,0.276149695926898,0,0.710019185033229,0,0,0,0.545492241181669,0,0.487894824518382,0.397589304964456,0.69716365721711,0.207322110030741,1.00928340350251,0,0,0,0,1.39310378409594,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0.383382679165211,0,0.792435906119034,1.24396869324463,0.864719720501769,0,0.317489471460845,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,0.394061520403854,0.862510299438069,0.898401253958239,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.368323955743585,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.338583555603207,0.321176150207399,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.703347082052564,0.111308705022906,0.494411622680279,1.47787785689595,1.19548792950642,0,0.251932747854276,0,0.123084805461069,0,0,0,2.04628948090749,0.0986434056369336,2.3948309234694,1.11136990144637,0.969332746095218,0,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,1.52581736317083,1.10579259931225,0.886642856860642,0,0.21787692703798,0,0,0,0.23056390438806,0,0.217294743844016,0.31900115973192,0,0,0,0.470940769185074,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0.706765357169704,0.216388639742091,0.995261931078505,0.530745387020035,2.4441205797345,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0.483781656445426,0.65780385377567,0.492692742319255,0.0969890164884194,0.0882561266915003,0.451961481561065,0.274083849293502,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0.229073192331831,0,0.14405479798815,0.372757606696298,0,0,0,0.101998217636322,0,0,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0.236349546921671,0.494495150286999,0.26961417541674,0,0.254019996197353,0,0.681017030557878,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.66116300871345,0.171086837884329,0,0,0,0.828478110694391,0.992332043623902,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.500763722825999,0.573409195690071,0.332787154610557,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.915360273587694,0.151230923763239,0.15543720058278,0.295710299979268,0.63718706865481,0,0,0,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0.490696182767533,0,0,0.422624246717254,0.39997479170986,0.213383459388282,0.172214979660816,0,0,0.279759015438889,0,0,0,0.943595651135378,0.218419276384028,0.169732529954025,0,0.619678821295011,0.558644917973244,0,0.23658523500376,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.645902582527404,0,0,0,0,0.462102664601353,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.413373593002368,0.19024743058172,0.546974809018219,0,0,0,0.127762427639595,0.535701835878287,0,1.82089681270989,0.455324382702595,0,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,1.25692471932802,0.280272163313789,2.73947616152849,0,0,0.0714765441766563,0,0.23248285073625,0.173858272302579,0,0.207216164163037,0.51215543128185,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0.233939463462106,0,0,0.11294608203896,0.329821550236287,0,0.463044948647668,0.437119121007915,0,0.735444965261716,0,0,0.594092800654172,0.8453114551668,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0.430018749454354,0.157771562193185,0,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,0.252332849670158,0,0.253397002022874,0.917899467677836,0,0.18378979906969,0,0.151557396436479,0,0.829169439458779,0.413731983447581,0,0.476128862927481,0.0645889098360061,0.124149428591716,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0.651226148887796,0,0,0.0898252021065869,0,0.122241444182866,1.22068853494722,0,0,0|short_description=p10@PAN3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=255967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29991 | |||
|TSSclassifier=N | |||
|UniProt=Q6UXP2 | |||
|association_with_transcript=-275bp_to_AY358261_5end | |||
|description=CAGE_peak_10_at_PAN3_5end | |||
|id=chr13:28867552..28867558,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.00e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.87e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.96e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.90e-08;1!UBERON:0001874;1.90e-08;1!UBERON:0007195;1.90e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,1.27e-08,1;UBERON:0007195,3.06e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0.993374274723366,0.57470412614962,0.393553906568396,0,0,0.928896739896456,0,0.30120591877825,0,0.0774672005803016,0.568676929949686,0,0,0.200544447470142,0.651032612147555,0,0.647787332037959,0,0.726991193897824,0,0,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0,1.03423704220986,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0.398927315243264,0,0,0,0,1.25624332628372,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0,0.628975936525128,0,0,0,0,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,1.1384259382189,2.34894875748376,1.14681968437569,0,0,0.526768169550154,0.590129310341499,0.786021525498329,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0.812411591295047,0.384273959177026,0.520237390239513,0.328875809207352,1.10540007114339,0,0,0.535081656179426,0,0.226618685395132,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0.403213486449465,0.534880391567015,1.15859523106239,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.252433774244115,0.276149695926898,0,0.710019185033229,0,0,0,0.545492241181669,0,0.487894824518382,0.397589304964456,0.69716365721711,0.207322110030741,1.00928340350251,0,0,0,0,1.39310378409594,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0.383382679165211,0,0.792435906119034,1.24396869324463,0.864719720501769,0,0.317489471460845,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0.224170287987055,0.394061520403854,0.862510299438069,0.898401253958239,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.368323955743585,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.338583555603207,0.321176150207399,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.703347082052564,0.111308705022906,0.494411622680279,1.47787785689595,1.19548792950642,0,0.251932747854276,0,0.123084805461069,0,0,0,2.04628948090749,0.0986434056369336,2.3948309234694,1.11136990144637,0.969332746095218,0,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,1.52581736317083,1.10579259931225,0.886642856860642,0,0.21787692703798,0,0,0,0.23056390438806,0,0.217294743844016,0.31900115973192,0,0,0,0.470940769185074,0.332423363800313,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0.706765357169704,0.216388639742091,0.995261931078505,0.530745387020035,2.4441205797345,0,0,0.104421949505455,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0.483781656445426,0.65780385377567,0.492692742319255,0.0969890164884194,0.0882561266915003,0.451961481561065,0.274083849293502,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0,0.288180834308212,0.229073192331831,0,0.14405479798815,0.372757606696298,0,0,0,0.101998217636322,0,0,0.958337652243951,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0,0,0.236349546921671,0.494495150286999,0.26961417541674,0,0.254019996197353,0,0.681017030557878,0.160753148465019,0.137539436597234,0,0.449947783103001,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.66116300871345,0.171086837884329,0,0,0,0.828478110694391,0.992332043623902,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.500763722825999,0.573409195690071,0.332787154610557,0,0.276697269872462,0,0.303298235083296,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.915360273587694,0.151230923763239,0.15543720058278,0.295710299979268,0.63718706865481,0,0,0,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0,1.19428766609585,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0.490696182767533,0,0,0.422624246717254,0.39997479170986,0.213383459388282,0.172214979660816,0,0,0.279759015438889,0,0,0,0.943595651135378,0.218419276384028,0.169732529954025,0,0.619678821295011,0.558644917973244,0,0.23658523500376,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.645902582527404,0,0,0,0,0.462102664601353,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.413373593002368,0.19024743058172,0.546974809018219,0,0,0,0.127762427639595,0.535701835878287,0,1.82089681270989,0.455324382702595,0,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,1.25692471932802,0.280272163313789,2.73947616152849,0,0,0.0714765441766563,0,0.23248285073625,0.173858272302579,0,0.207216164163037,0.51215543128185,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0.233939463462106,0,0,0.11294608203896,0.329821550236287,0,0.463044948647668,0.437119121007915,0,0.735444965261716,0,0,0.594092800654172,0.8453114551668,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0.430018749454354,0.157771562193185,0,0.436350690340377,0.5290268405154,0.371995018166751,0.462175628631418,0,0.252332849670158,0,0.253397002022874,0.917899467677836,0,0.18378979906969,0,0.151557396436479,0,0.829169439458779,0.413731983447581,0,0.476128862927481,0.0645889098360061,0.124149428591716,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0.651226148887796,0,0,0.0898252021065869,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p10@PAN3 | |||
}} |
Revision as of 01:55, 11 September 2013
Short description: | p10@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PAN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -275bp_to_AY358261_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | Q6UXP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.87e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
putamen | 1.27e-08 | 1 |
stroma of bone marrow | 3.06e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.