FFCP PHASE1:Hg19::chr13:28712705..28712731,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255967|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29991|TSSclassifier=S|UniProt=Q58A45|association_with_transcript=62bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end|description=CAGE_peak_3_at_PAN3_5end|id=chr13:28712705..28712731,+|ontology_enrichment_celltype=CL:0000037!1.43e-12!172;CL:0000566!1.43e-12!172;CL:0000988!8.00e-12!182;CL:0002032!2.35e-10!165;CL:0000837!2.35e-10!165;CL:0000763!1.92e-08!112;CL:0000049!1.92e-08!112;CL:0000738!3.33e-07!140|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000037,2.23e-16,168;CL:0000988,1.15e-15,177;CL:0002032,1.74e-13,161;CL:0000837,1.74e-13,161;CL:0000763,1.54e-10,108;CL:0000049,1.54e-10,108;CL:0000738,5.51e-09,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:1240,4.65e-07,39;DOID:8692,6.36e-07,31|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0.791300934685361,0.495065411840187,1.65698687863958,0,0.602694528023977,0,0.487932798790507,0.738726348460727,1.42800483870977,0,2.0036519099174,1.64249310087461,0.753255837568817,0.229240217243854,0.164201178899891,0.393553906568396,1.96682138424452,1.53531759238885,1.39334510984468,0,0.30120591877825,1.10926203050036,3.25362242437267,1.42169232487422,5.87200878669694,1.10799081706375,0.802177789880567,3.47217393145363,2.68698569087909,1.6194683300949,0.77272670290256,1.74477886535478,2.26725566213286,1.4555043671269,0.697287110717054,1.23350366406548,0.309706370895104,1.43846196161075,1.0246428261164,1.41889337933151,1.03423704220986,3.22742341791913,1.35426486594342,1.50593871634084,0.545812300115692,0.449446968890169,0.612167784741805,1.60464513538047,2.55734850319616,1.9791078011203,0.797854630486527,1.70489900213078,0.870627715885752,2.26954089876456,1.86846674698672,2.00998932205395,1.0429658368404,0.434377689410233,2.42159801053347,1.10483290796269,1.26584954976354,1.26753171787165,1.4882300997553,0.628975936525128,1.01095768031846,0.901061357049038,0.803627933485401,0.855038231223746,0.19891667719909,0.91332076882317,0,1.09227722252426,0.889509253863555,1.70692089026603,1.20118796110804,0,0.661044872784862,0,1.1384259382189,2.93618594685469,0.764546456250458,14.5388461436928,3.92355994087075,3.423993102076,5.70458333330116,4.71612915298998,3.70082698199117,2.17342444007882,2.28145586643513,3.31413464014313,5.84480185223734,0.779873198196215,1.76763544484902,0.886135578334485,0.812411591295047,0.768547918354051,1.1705341280389,2.63100647365882,3.03985019564433,2.02862160014537,6.3763222159686,6.95606153033254,3.1360657141493,1.92625882585863,2.68254345521345,3.09264700934367,1.51811815211702,1.59282707162048,1.30216690771284,1.90090408889675,3.312652619711,1.91979916731628,2.49861453104692,1.4206635122641,0,2.01606743224732,1.06976078313403,3.04131248153878,2.43806866313962,0.670700859703636,0.511450247374121,1.0843174571537,0,0.144846518960824,0,1.45990461090791,2.74150969775797,3.54767035940102,4.91874799881506,0.72038491523742,0.364295288292542,0.370784442784429,0,1.0447784237956,0.531831842075461,5.24679373471752,5.71994910780128,5.94332002127304,0.79504962946682,0,0.347140501607594,1.13061588384802,0,0.825354125820202,0.626984899610432,0.516833518338658,1.42306505074684,1.00416183829401,0.805658634218294,0.760272105718513,1.46437234528902,0.367663080345869,0,0.892997282840798,2.02076435363553,1.23872628531654,0,0,1.09921046358244,5.27121669744253,0,1.74437620857014,1.49091585508596,0.633152558322899,1.05927344650575,2.0078563452417,0.354668382198357,0.560677600142307,1.06748995729705,0,0.933633106199299,2.02066008104532,1.14423332179421,6.20565453344219,11.5235184896,0.234321431833797,0.624320153660641,0,0.597794722207204,0.939475989150119,1.61872944368132,0.421352420106746,1.02077085627447,1.59684612505298,1.23990937410919,1.18800285728205,0.989067717114227,0,0,0.505008341862199,0.875829639103749,0.554128230968366,0,0.612975591598039,1.20190447125277,0.340296549480063,1.97328599257748,1.49490172172997,1.27159140695737,0.600182192168805,0.412210116953756,1.8034837803194,0.930584281657949,1.35021065793013,0.584622030967192,1.26216887122057,0.644349290496095,0.80823028409406,0.355009592516614,0.806016785821122,0.339121184620975,0.773043412653187,0,1.14721838155602,5.85473789422058,7.55419679432466,4.29917588617218,3.62813692553797,5.04641701751257,12.774207567654,1.56449532329816,3.85944562915731,0,0,0,0,0.337169380156203,0.723033089650446,0.330881918197182,0,0,0,0,0.38474715694639,0.738155454624648,0,0.8231480226628,0,1.26755034821831,1.96565443335525,0,7.06340959063441,0.737930631258681,0.686271241194102,0.658501712451753,0,0.502644862058154,0.925884451585296,0.325808305310325,0,1.44331342025273,1.27523445472584,1.05667824812239,0.288732895522148,0,0.190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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=255967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29991 | |||
|TSSclassifier=S | |||
|UniProt=Q58A45 | |||
|association_with_transcript=62bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end | |||
|description=CAGE_peak_3_at_PAN3_5end | |||
|id=chr13:28712705..28712731,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.43e-12!172;CL:0000566!1.43e-12!172;CL:0000988!8.00e-12!182;CL:0002032!2.35e-10!165;CL:0000837!2.35e-10!165;CL:0000763!1.92e-08!112;CL:0000049!1.92e-08!112;CL:0000738!3.33e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.65e-07,39;DOID:8692,6.36e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@PAN3 | |||
}} |
Revision as of 01:54, 11 September 2013
Short description: | p3@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PAN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000380958, ENST00000503791, NM_175854, uc010tdo.1_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | Q58A45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.23e-16 | 168 |
hematopoietic cell | 1.15e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.74e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-13 | 161 |
myeloid cell | 1.54e-10 | 108 |
common myeloid progenitor | 1.54e-10 | 108 |
leukocyte | 5.51e-09 | 136 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.65e-07 | 39 |
myeloid leukemia | 6.36e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.