FFCP PHASE1:Hg19::chr13:111806083..111806105,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000375736_5end | |||
|description=CAGE_peak_6_at_ARHGEF7_5end | |||
|id=chr13:111806083..111806105,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.36e-31!140;CL:0000037!1.77e-25!172;CL:0000566!1.77e-25!172;CL:0000988!1.05e-23!182;CL:0002032!1.61e-22!165;CL:0000837!1.61e-22!165;CL:0002087!7.73e-22!119;CL:0002031!1.37e-21!124;CL:0000766!1.63e-14!76;CL:0002057!3.03e-14!42;CL:0000860!1.00e-13!45;CL:0000557!2.96e-12!71;CL:0000542!1.04e-11!53;CL:0000051!1.04e-11!53;CL:0000763!2.40e-11!112;CL:0000049!2.40e-11!112;CL:0000838!3.13e-11!52;CL:0002009!1.87e-10!65;CL:0000839!6.51e-10!70;CL:0002194!1.66e-09!63;CL:0000576!1.66e-09!63;CL:0000040!1.66e-09!63;CL:0000559!1.66e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-18;33!CL:0002057;1.83e-18;33!CL:0000473;3.08e-12;39!CL:0000234;3.08e-12;39!CL:0000576;1.99e-10;48!CL:0000094;4.75e-10;8!CL:0000766;7.26e-10;69!CL:0002087;9.70e-09;104!CL:0000738;2.68e-08;136!CL:0000081;3.56e-08;11!CL:0000542;5.84e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.36e-41,136;CL:0000037,5.65e-35,168;CL:0000988,1.42e-32,177;CL:0002032,1.49e-30,161;CL:0000837,1.49e-30,161;CL:0002031,4.59e-27,120;CL:0002087,7.11e-27,115;CL:0000860,5.57e-21,42;CL:0002057,5.57e-21,42;CL:0000766,7.32e-21,72;CL:0000763,1.94e-17,108;CL:0000049,1.94e-17,108;CL:0000557,5.37e-17,67;CL:0000473,6.44e-17,48;CL:0000234,6.44e-17,48;CL:0002009,3.84e-14,61;CL:0000839,1.06e-13,66;CL:0002194,1.49e-12,59;CL:0000576,1.49e-12,59;CL:0000040,1.49e-12,59;CL:0000559,1.49e-12,59;CL:0000542,1.53e-12,53;CL:0000051,1.53e-12,53;CL:0000838,8.15e-12,52;CL:0000094,4.71e-10,8;CL:0000134,4.90e-09,354;CL:0002320,2.39e-08,361;CL:0000081,2.95e-08,11;CL:0000219,8.38e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.12e-16;42!CL:0000051;5.84e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.54e-11!102;UBERON:0003061!3.54e-11!102;UBERON:0002193!1.04e-10!112;UBERON:0002371!3.10e-09!80;UBERON:0001474!1.62e-08!86;UBERON:0002405!2.57e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.00e-16,98;UBERON:0003061,3.00e-16,98;UBERON:0002405,8.42e-16,93;UBERON:0002193,1.64e-15,108;UBERON:0002371,1.90e-13,76;UBERON:0001474,3.27e-12,82;UBERON:0004765,4.81e-10,90;UBERON:0001434,6.69e-08,100;UBERON:0002384,1.97e-07,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.369363174230364,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.229240217243854,0.57470412614962,0.472264687882075,3.14691421479123,3.0706351847777,2.47705797305722,0,0.6024118375565,0.739508020333575,3.64095842727418,1.56386155736164,0.587200878669695,3.32397245119126,5.21415563422368,3.47217393145363,0,0.971680998056939,0.515151135268373,1.59938062657521,2.64513160582167,1.69808842831471,1.62700325833979,5.34518254428373,3.09706370895104,2.58923153089935,3.07392847834921,1.89185783910868,1.72372840368309,1.93645405075148,1.35426486594342,1.12945403725563,1.36453075028923,1.12361742222542,0.918251677112708,3.20929027076094,2.55734850319616,1.64925650093358,2.59302754908121,1.27867425159808,1.7412554317715,2.8369261234557,0,1.00499466102697,1.5644487552606,0.868755378820466,1.21079900526674,2.94622108790052,1.89877432464531,0.845021145247767,0.212604299965044,0.838634582033504,1.23561494261145,1.35159203557356,1.12507910687956,0.285012743741249,0.39783335439818,1.82664153764634,3.51992488922645,0.546138611262131,0.889509253863555,1.70692089026603,1.20118796110804,0.574752439954483,1.32208974556972,1.90810750907073,2.84606484554724,4.11066032559657,4.58727873750275,2.64342657158052,3.92355994087075,1.31692042387539,2.9506465517075,2.75107533924415,5.75684197198626,0.167186495390678,4.88883399950386,1.4203434172042,5.84480185223734,0.445641827540694,0.883817722424512,1.55073726208535,0.270803863765016,0.384273959177026,0.520237390239513,0.657751618414705,0.276350017785848,0.869409257205157,2.07601188426885,4.81573490561484,1.04535523804977,0.793165398882963,1.53288197440768,0.68725489096526,0.759059076058509,0,0.651083453856419,0,0.903450714466637,0.639933055772092,0,0.236777252044017,0.821127996921047,5.84659555351724,4.27904313253612,5.21367853978076,0,0,0.255725123687061,1.0843174571537,0,0.144846518960824,0,0,0.472674085820339,0,0.263504357079378,0.523916301990851,0,1.11235332835329,0,0.348259474598534,0.26591592103773,19.556231193038,17.731842234184,18.9443325678078,0.993812036833525,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.417989933073621,1.03366703667732,1.42306505074684,2.00832367658802,0.402829317109147,0,1.70843440283719,0,0,0.446498641420399,0.898117490504679,0.788280363383256,1.53316637465883,0,0.732806975721629,3.9534125230819,7.75560528296651,0.436094052142534,0.496971951695318,0.506522046658319,0.662045904066094,0.573673241497627,0.709336764396714,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0.469737994575059,0,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.751190294532984,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0.257640540045629,0.37223371266318,0.506328996723799,0.194874010322397,0.504867548488229,0.368199594569197,0.969876340912871,1.06502877754984,0.503760491138201,1.01736355386293,0.57978255948989,0.545492241181669,1.14721838155602,0.487894824518382,0.397589304964456,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,5.73902029239046,0.122988438543114,0.171567810298526,0.548751427043128,0,0.904760751704678,0,0.977424915930974,0,0,0.115930404975077,0.117408694235822,0.577465791044295,0,0.570762456703795,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0.743155811443641,0,0.16798212819886,0.425325291727159,0,0.290633938513962,0.383382679165211,1.47798971368783,0.44024217006613,2.28060927094849,1.44119953416961,1.64115163454294,0.317489471460845,0.381988425558278,0,0,0.822619941626588,0.600686115687835,0.285826432630578,0.112131084345361,0,0,0.387815147273333,0,0,0,2.08014873822732,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0.791951872933429,1.20575750823834,0,0.299918973546171,0,0.502257091432126,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0,0.672510863961164,2.75843064282698,2.15627574859517,4.2353201972317,0.76228387266739,0,1.54657762555539,0.335032530668698,0.637938751653163,2.24702107184155,2.99161459204025,5.8018171881045,0.36807447515742,0.500170521059677,0.542530047399471,2.9115920614313,0.535286966391485,0.473107245101804,0.702848489956279,0,0,1.03473071292505,0,1.29058417979192,0.0868836144680828,0,0.686286847621712,1.03384013061444,3.01999881146064,4.802740101155,0.303127571446259,0,0.30239029332968,0.744323423456331,0.306923946576125,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.697262270759755,0,0.40101294060657,0.0920809889358963,0.459257792658427,0.182091168006717,0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| |||
|short_description=p6@ARHGEF7 | |||
}} |
Revision as of 01:31, 11 September 2013
Short description: | p6@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ARHGEF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375736_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.36e-41 | 136 |
hematopoietic stem cell | 5.65e-35 | 168 |
hematopoietic cell | 1.42e-32 | 177 |
hematopoietic oligopotent progenitor cell | 1.49e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-30 | 161 |
hematopoietic lineage restricted progenitor cell | 4.59e-27 | 120 |
nongranular leukocyte | 7.11e-27 | 115 |
classical monocyte | 5.57e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.57e-21 | 42 |
myeloid leukocyte | 7.32e-21 | 72 |
myeloid cell | 1.94e-17 | 108 |
common myeloid progenitor | 1.94e-17 | 108 |
granulocyte monocyte progenitor cell | 5.37e-17 | 67 |
defensive cell | 6.44e-17 | 48 |
phagocyte | 6.44e-17 | 48 |
macrophage dendritic cell progenitor | 3.84e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.06e-13 | 66 |
monopoietic cell | 1.49e-12 | 59 |
monocyte | 1.49e-12 | 59 |
monoblast | 1.49e-12 | 59 |
promonocyte | 1.49e-12 | 59 |
lymphocyte | 1.53e-12 | 53 |
common lymphoid progenitor | 1.53e-12 | 53 |
lymphoid lineage restricted progenitor cell | 8.15e-12 | 52 |
granulocyte | 4.71e-10 | 8 |
mesenchymal cell | 4.90e-09 | 354 |
connective tissue cell | 2.39e-08 | 361 |
blood cell | 2.95e-08 | 11 |
motile cell | 8.38e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.00e-16 | 98 |
blood island | 3.00e-16 | 98 |
immune system | 8.42e-16 | 93 |
hemolymphoid system | 1.64e-15 | 108 |
bone marrow | 1.90e-13 | 76 |
bone element | 3.27e-12 | 82 |
skeletal element | 4.81e-10 | 90 |
skeletal system | 6.69e-08 | 100 |
connective tissue | 1.97e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.