FFCP PHASE1:Hg19::chr13:109281953..109281967,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23026|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29822|TSSclassifier=N|UniProt=B4DZI1,Q9Y6X6|association_with_transcript=382bp_to_NM_001198950_5end|coexpression_cluster_id=C212|description=CAGE_peak_1_at_MYO16_5end|id=chr13:109281953..109281967,+|ontology_enrichment_celltype=CL:0002274!3.25e-10!5;CL:0000457!3.25e-10!5;CL:0002191!3.25e-10!5;CL:0000097!3.25e-10!5;CL:0000831!3.25e-10!5;CL:0002028!3.25e-10!5|ontology_enrichment_celltype_v019=CL:0000097;2.56e-13;5!CL:0000163;1.28e-07;9|ontology_enrichment_celltype_v019_2=CL:0000097,4.18e-13,5;CL:0002028,4.18e-13,5;CL:0000163,1.67e-07,9|ontology_enrichment_development_v019=UBERON:0006601;2.79e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!1.79e-61!22;UBERON:0001049!1.57e-59!57;UBERON:0005068!1.57e-59!57;UBERON:0006241!1.57e-59!57;UBERON:0007135!1.57e-59!57;UBERON:0001893!2.75e-58!34;UBERON:0002020!3.31e-58!34;UBERON:0003528!3.31e-58!34;UBERON:0001869!6.29e-58!32;UBERON:0001950!1.32e-55!20;UBERON:0002791!2.03e-55!33;UBERON:0000956!1.21e-53!25;UBERON:0000203!1.21e-53!25;UBERON:0001017!5.56e-51!82;UBERON:0002780!6.46e-51!41;UBERON:0001890!6.46e-51!41;UBERON:0006240!6.46e-51!41;UBERON:0002616!1.72e-50!59;UBERON:0000955!5.07e-50!69;UBERON:0006238!5.07e-50!69;UBERON:0003080!1.52e-49!42;UBERON:0005743!3.66e-48!86;UBERON:0000073!1.13e-42!94;UBERON:0001016!1.13e-42!94;UBERON:0003075!7.30e-41!86;UBERON:0007284!7.30e-41!86;UBERON:0002346!1.30e-38!90;UBERON:0003056!6.35e-32!61;UBERON:0007023!9.02e-30!115;UBERON:0000033!3.31e-27!123;UBERON:0000153!3.92e-27!129;UBERON:0007811!3.92e-27!129;UBERON:0004121!1.54e-20!169;UBERON:0000924!7.90e-20!173;UBERON:0006601!7.90e-20!173;UBERON:0001871!7.76e-19!7;UBERON:0000200!8.15e-19!6;UBERON:0000349!4.95e-16!5;UBERON:0002021!9.40e-16!5;UBERON:0001872!2.00e-15!5;UBERON:0000025!9.13e-13!194;UBERON:0002298!1.41e-12!8;UBERON:0003076!2.98e-11!15;UBERON:0003057!2.98e-11!15;UBERON:0002771!5.64e-10!3;UBERON:0000988!1.98e-09!3;UBERON:0001896!2.89e-09!3;UBERON:0005290!2.89e-09!3;UBERON:0010096!2.89e-09!3;UBERON:0004111!3.60e-09!241;UBERON:0002420!2.92e-08!9;UBERON:0007245!2.92e-08!9;UBERON:0010009!2.92e-08!9;UBERON:0010011!2.92e-08!9;UBERON:0000454!2.92e-08!9;UBERON:0004733!3.71e-08!12;UBERON:0002028!3.71e-08!12;UBERON:0007277!3.71e-08!12;UBERON:0000064!4.86e-08!219;UBERON:0002308!6.35e-08!9;UBERON:0000125!6.35e-08!9;UBERON:0001870!1.39e-07!2;UBERON:0004732!1.77e-07!13;UBERON:0001876!1.85e-07!2;UBERON:0001954!1.91e-07!2;UBERON:0003022!1.91e-07!2;UBERON:0002421!1.91e-07!2;UBERON:0002600!1.91e-07!2;UBERON:0000477!6.59e-07!286;UBERON:0002148!8.48e-07!2;UBERON:0009662!8.48e-07!2;UBERON:0000483!8.55e-07!309|ontology_enrichment_uberon_v019=UBERON:0002619;2.01e-76;22!UBERON:0001950;1.77e-73;20!UBERON:0000956;2.87e-67;25!UBERON:0000203;2.87e-67;25!UBERON:0001869;3.32e-60;32!UBERON:0001893;3.22e-55;34!UBERON:0002791;1.82e-54;32!UBERON:0003528;3.36e-48;34!UBERON:0002020;3.36e-48;34!UBERON:0002780;9.31e-36;41!UBERON:0001890;9.31e-36;41!UBERON:0000200;2.92e-29;6!UBERON:0002021;7.96e-23;5!UBERON:0001870;8.54e-22;3!UBERON:0000073;1.09e-21;53!UBERON:0002616;1.09e-21;53!UBERON:0000955;1.01e-18;68!UBERON:0001871;7.15e-17;6!UBERON:0001017;2.87e-16;75!UBERON:0002702;3.98e-15;2!UBERON:0001016;4.22e-15;83!UBERON:0000349;7.70e-14;5!UBERON:0001872;1.54e-13;5!UBERON:0002022;8.44e-09;1!UBERON:0002581;2.05e-08;1!UBERON:0002902;2.05e-08;1!UBERON:0001882;2.05e-08;1!UBERON:0009899;2.05e-08;1!UBERON:0007190;2.05e-08;1!UBERON:0005403;2.05e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.38e-76,22;UBERON:0001950,1.29e-73,20;UBERON:0000956,2.05e-67,25;UBERON:0000203,2.05e-67,25;UBERON:0001869,8.61e-67,32;UBERON:0001893,8.70e-63,34;UBERON:0002791,2.63e-59,32;UBERON:0003528,9.70e-56,34;UBERON:0002020,9.70e-56,34;UBERON:0002780,9.02e-52,41;UBERON:0001890,9.02e-52,41;UBERON:0003080,9.02e-52,41;UBERON:0006240,9.02e-52,41;UBERON:0001049,9.22e-42,56;UBERON:0005068,9.22e-42,56;UBERON:0006241,9.22e-42,56;UBERON:0007135,9.22e-42,56;UBERON:0000073,1.60e-39,53;UBERON:0002616,1.60e-39,53;UBERON:0000955,3.62e-37,68;UBERON:0006238,3.62e-37,68;UBERON:0001017,3.50e-34,81;UBERON:0003056,5.47e-34,61;UBERON:0001016,1.84e-30,89;UBERON:0000200,1.49e-29,6;UBERON:0003075,1.44e-27,82;UBERON:0007284,1.44e-27,82;UBERON:0002346,3.90e-26,86;UBERON:0002021,6.37e-23,5;UBERON:0001870,4.34e-22,3;UBERON:0010371,4.88e-21,104;UBERON:0001871,6.89e-17,6;UBERON:0010314,7.60e-16,132;UBERON:0002702,2.59e-15,2;UBERON:0004121,2.92e-14,171;UBERON:0000924,2.92e-14,171;UBERON:0006601,2.92e-14,171;UBERON:0000349,8.61e-14,5;UBERON:0001872,2.22e-13,5;UBERON:0007023,2.77e-11,114;UBERON:0011216,3.01e-11,223;UBERON:0000025,8.70e-10,192;UBERON:0002022,8.15e-09,1;UBERON:0007190,1.02e-08,1;UBERON:0002902,1.48e-08,1;UBERON:0009899,1.48e-08,1;UBERON:0002581,1.84e-08,1;UBERON:0001882,2.84e-08,1;UBERON:0005403,2.84e-08,1;UBERON:0004111,4.09e-07,240|phase1_expression=0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29822 | |||
|TSSclassifier=N | |||
|UniProt=B4DZI1,Q9Y6X6 | |||
|association_with_transcript=382bp_to_NM_001198950_5end | |||
|coexpression_cluster_id=C212 | |||
|description=CAGE_peak_1_at_MYO16_5end | |||
|id=chr13:109281953..109281967,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.25e-10!5;CL:0000457!3.25e-10!5;CL:0002191!3.25e-10!5;CL:0000097!3.25e-10!5;CL:0000831!3.25e-10!5;CL:0002028!3.25e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.56e-13;5!CL:0000163;1.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.18e-13,5;CL:0002028,4.18e-13,5;CL:0000163,1.67e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.79e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@MYO16 | |||
}} |
Revision as of 01:25, 11 September 2013
Short description: | p1@MYO16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYO16_5end |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | 382bp_to_NM_001198950_5end |
EntrezGene: | MYO16 |
HGNC: | 29822 |
UniProt: | B4DZI1Q9Y6X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.18e-13 | 5 |
basophil mast progenitor cell | 4.18e-13 | 5 |
endocrine cell | 1.67e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.