FFCP PHASE1:Hg19::chr13:108922574..108922585,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10673|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11929|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000479435_5end|coexpression_cluster_id=C1186|description=CAGE_peak_8_at_TNFSF13B_5end|id=chr13:108922574..108922585,+|ontology_enrichment_celltype=CL:0000763!3.85e-46!112;CL:0000049!3.85e-46!112;CL:0000766!1.26e-38!76;CL:0000037!4.38e-37!172;CL:0000566!4.38e-37!172;CL:0002194!6.16e-37!63;CL:0000576!6.16e-37!63;CL:0000040!6.16e-37!63;CL:0000559!6.16e-37!63;CL:0002009!2.66e-35!65;CL:0002057!5.39e-34!42;CL:0002032!1.24e-33!165;CL:0000837!1.24e-33!165;CL:0000988!1.56e-33!182;CL:0000860!1.50e-32!45;CL:0000839!1.25e-31!70;CL:0000557!5.88e-31!71;CL:0000738!1.26e-28!140;CL:0002087!5.81e-24!119;CL:0002031!2.77e-19!124;CL:0002393!1.04e-11!9;CL:0002397!1.04e-11!9;CL:0000134!7.72e-07!358;CL:0000094!8.14e-07!8|ontology_enrichment_celltype_v019=CL:0000576;4.74e-32;48!CL:0000860;1.54e-27;33!CL:0002057;1.54e-27;33!CL:0000473;1.07e-26;39!CL:0000234;1.07e-26;39!CL:0000763;7.38e-22;100!CL:0000766;6.68e-20;69!CL:0000775;3.60e-12;3!CL:0000094;1.04e-11;8!CL:0000988;2.33e-10;177!CL:0002393;2.98e-09;6!CL:0002397;2.98e-09;6!CL:0000771;1.66e-08;2!CL:0000081;2.08e-08;11!CL:0000738;3.08e-07;136|ontology_enrichment_celltype_v019_2=CL:0000763,3.62e-59,108;CL:0000049,3.62e-59,108;CL:0000766,4.60e-51,72;CL:0000473,6.49e-47,48;CL:0000234,6.49e-47,48;CL:0002194,4.49e-45,59;CL:0000576,4.49e-45,59;CL:0000040,4.49e-45,59;CL:0000559,4.49e-45,59;CL:0002009,2.28e-43,61;CL:0000860,1.54e-42,42;CL:0002057,1.54e-42,42;CL:0000839,1.50e-39,66;CL:0000557,7.42e-39,67;CL:0000037,4.74e-38,168;CL:0002032,2.54e-36,161;CL:0000837,2.54e-36,161;CL:0000988,1.42e-35,177;CL:0000738,1.06e-24,136;CL:0002087,1.29e-19,115;CL:0002031,1.70e-18,120;CL:0002393,6.08e-13,9;CL:0002397,6.08e-13,9;CL:0000134,2.13e-12,354;CL:0000775,2.89e-12,3;CL:0002320,5.99e-12,361;CL:0000094,8.18e-12,8;CL:0000219,2.28e-10,386;CL:0000771,1.39e-08,2;CL:0000081,1.76e-08,11;CL:0000048,1.92e-08,427;CL:0000723,3.53e-08,433;CL:0000034,7.74e-08,441|ontology_enrichment_development_v019=CL:0002057;1.11e-29;42!CL:0000049;1.42e-18;108|ontology_enrichment_disease=DOID:8692!4.02e-08!31|ontology_enrichment_disease_v019=DOID:8692;9.78e-12;31!DOID:1240;6.22e-08;39|ontology_enrichment_disease_v019_2=DOID:8692,7.98e-12,31;DOID:1240,6.33e-09,39|ontology_enrichment_uberon=UBERON:0002390!1.12e-38!102;UBERON:0003061!1.12e-38!102;UBERON:0002193!8.30e-36!112;UBERON:0002371!3.44e-27!80;UBERON:0001474!3.52e-24!86;UBERON:0004765!2.70e-19!101;UBERON:0001434!2.70e-19!101;UBERON:0002405!3.25e-19!115;UBERON:0007023!1.79e-13!115;UBERON:0000178!1.03e-11!15;UBERON:0000179!1.03e-11!15;UBERON:0000463!1.03e-11!15;UBERON:0003081!8.83e-11!216;UBERON:0002204!3.43e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;5.37e-17;15!UBERON:0000179;5.37e-17;15!UBERON:0000463;5.37e-17;15!UBERON:0002390;4.70e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.58e-47,98;UBERON:0003061,6.58e-47,98;UBERON:0002193,1.03e-41,108;UBERON:0002371,6.69e-36,76;UBERON:0001474,9.89e-33,82;UBERON:0004765,3.71e-29,90;UBERON:0002405,5.64e-28,93;UBERON:0001434,1.72e-25,100;UBERON:0003081,5.47e-19,203;UBERON:0000178,5.35e-17,15;UBERON:0000179,5.35e-17,15;UBERON:0000463,5.35e-17,15;UBERON:0002204,2.78e-12,167;UBERON:0002384,2.45e-11,371;UBERON:0000926,6.65e-09,315;UBERON:0004120,6.65e-09,315;UBERON:0006603,6.65e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0.383829398097213,0,0,0,0,0,0,1.46800219667424,1.10799081706375,0.601633342410425,0.217010870715852,1.34349284543955,0,1.28787783817093,1.45398238779565,0.755751887377619,1.21292030593908,0.697287110717054,0,0.309706370895104,2.8769239232215,1.7931249457037,3.31075121844019,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.918251677112708,0.641858054152187,0,9.56568770541477,6.18337338627059,4.68847225585964,3.19230162491442,0,0,3.51748131359441,1.0429658368404,2.17188844705117,7.26479403160043,3.68277635987565,2.21523671208619,2.32380814943136,1.27562579979026,1.88692780957538,2.13424399178341,2.85336096398862,3.37523732063868,1.99508920618874,1.39241674039363,0.91332076882317,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.390178042679635,0.493313713811028,0,0.289803085735052,0,0,0,0,0,0,0.759059076058509,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,1.29818957461873,0.870648686496336,0.398873881556595,0,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,0.234004265139238,0.891786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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10673 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000479435_5end | |||
|coexpression_cluster_id=C1186 | |||
|description=CAGE_peak_8_at_TNFSF13B_5end | |||
|id=chr13:108922574..108922585,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.85e-46!112;CL:0000049!3.85e-46!112;CL:0000766!1.26e-38!76;CL:0000037!4.38e-37!172;CL:0000566!4.38e-37!172;CL:0002194!6.16e-37!63;CL:0000576!6.16e-37!63;CL:0000040!6.16e-37!63;CL:0000559!6.16e-37!63;CL:0002009!2.66e-35!65;CL:0002057!5.39e-34!42;CL:0002032!1.24e-33!165;CL:0000837!1.24e-33!165;CL:0000988!1.56e-33!182;CL:0000860!1.50e-32!45;CL:0000839!1.25e-31!70;CL:0000557!5.88e-31!71;CL:0000738!1.26e-28!140;CL:0002087!5.81e-24!119;CL:0002031!2.77e-19!124;CL:0002393!1.04e-11!9;CL:0002397!1.04e-11!9;CL:0000134!7.72e-07!358;CL:0000094!8.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.74e-32;48!CL:0000860;1.54e-27;33!CL:0002057;1.54e-27;33!CL:0000473;1.07e-26;39!CL:0000234;1.07e-26;39!CL:0000763;7.38e-22;100!CL:0000766;6.68e-20;69!CL:0000775;3.60e-12;3!CL:0000094;1.04e-11;8!CL:0000988;2.33e-10;177!CL:0002393;2.98e-09;6!CL:0002397;2.98e-09;6!CL:0000771;1.66e-08;2!CL:0000081;2.08e-08;11!CL:0000738;3.08e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.62e-59,108;CL:0000049,3.62e-59,108;CL:0000766,4.60e-51,72;CL:0000473,6.49e-47,48;CL:0000234,6.49e-47,48;CL:0002194,4.49e-45,59;CL:0000576,4.49e-45,59;CL:0000040,4.49e-45,59;CL:0000559,4.49e-45,59;CL:0002009,2.28e-43,61;CL:0000860,1.54e-42,42;CL:0002057,1.54e-42,42;CL:0000839,1.50e-39,66;CL:0000557,7.42e-39,67;CL:0000037,4.74e-38,168;CL:0002032,2.54e-36,161;CL:0000837,2.54e-36,161;CL:0000988,1.42e-35,177;CL:0000738,1.06e-24,136;CL:0002087,1.29e-19,115;CL:0002031,1.70e-18,120;CL:0002393,6.08e-13,9;CL:0002397,6.08e-13,9;CL:0000134,2.13e-12,354;CL:0000775,2.89e-12,3;CL:0002320,5.99e-12,361;CL:0000094,8.18e-12,8;CL:0000219,2.28e-10,386;CL:0000771,1.39e-08,2;CL:0000081,1.76e-08,11;CL:0000048,1.92e-08,427;CL:0000723,3.53e-08,433;CL:0000034,7.74e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-29;42!CL:0000049;1.42e-18;108 | |||
|ontology_enrichment_disease=DOID:8692!4.02e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.78e-12;31!DOID:1240;6.22e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.98e-12,31;DOID:1240,6.33e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-38!102;UBERON:0003061!1.12e-38!102;UBERON:0002193!8.30e-36!112;UBERON:0002371!3.44e-27!80;UBERON:0001474!3.52e-24!86;UBERON:0004765!2.70e-19!101;UBERON:0001434!2.70e-19!101;UBERON:0002405!3.25e-19!115;UBERON:0007023!1.79e-13!115;UBERON:0000178!1.03e-11!15;UBERON:0000179!1.03e-11!15;UBERON:0000463!1.03e-11!15;UBERON:0003081!8.83e-11!216;UBERON:0002204!3.43e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.37e-17;15!UBERON:0000179;5.37e-17;15!UBERON:0000463;5.37e-17;15!UBERON:0002390;4.70e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.58e-47,98;UBERON:0003061,6.58e-47,98;UBERON:0002193,1.03e-41,108;UBERON:0002371,6.69e-36,76;UBERON:0001474,9.89e-33,82;UBERON:0004765,3.71e-29,90;UBERON:0002405,5.64e-28,93;UBERON:0001434,1.72e-25,100;UBERON:0003081,5.47e-19,203;UBERON:0000178,5.35e-17,15;UBERON:0000179,5.35e-17,15;UBERON:0000463,5.35e-17,15;UBERON:0002204,2.78e-12,167;UBERON:0002384,2.45e-11,371;UBERON:0000926,6.65e-09,315;UBERON:0004120,6.65e-09,315;UBERON:0006603,6.65e-09,315 | |||
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|short_description=p8@TNFSF13B | |||
}} |
Revision as of 01:24, 11 September 2013
Short description: | p8@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | 0bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.58e-47 | 98 |
blood island | 6.58e-47 | 98 |
hemolymphoid system | 1.03e-41 | 108 |
bone marrow | 6.69e-36 | 76 |
bone element | 9.89e-33 | 82 |
skeletal element | 3.71e-29 | 90 |
immune system | 5.64e-28 | 93 |
skeletal system | 1.72e-25 | 100 |
lateral plate mesoderm | 5.47e-19 | 203 |
blood | 5.35e-17 | 15 |
haemolymphatic fluid | 5.35e-17 | 15 |
organism substance | 5.35e-17 | 15 |
musculoskeletal system | 2.78e-12 | 167 |
connective tissue | 2.45e-11 | 371 |
mesoderm | 6.65e-09 | 315 |
mesoderm-derived structure | 6.65e-09 | 315 |
presumptive mesoderm | 6.65e-09 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.98e-12 | 31 |
leukemia | 6.33e-09 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.