FFCP PHASE1:Hg19::chr13:108217411..108217413,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:108217411..108217413,-|id=chr13:108217411..108217413,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002174;2.13e-07;1!CL:0002553;2.13e-07;1!CL:0000501;2.13e-07;1|ontology_enrichment_celltype_v019_2=CL:0002174,1.25e-07,1;CL:0000501,1.25e-07,1;CL:0002553,1.42e-07,1|ontology_enrichment_development_v019=UBERON:0000358;7.97e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.28e-25!57;UBERON:0005068!1.28e-25!57;UBERON:0006241!1.28e-25!57;UBERON:0007135!1.28e-25!57;UBERON:0000073!3.10e-25!94;UBERON:0001016!3.10e-25!94;UBERON:0001017!2.83e-24!82;UBERON:0002616!9.35e-23!59;UBERON:0005743!2.78e-22!86;UBERON:0000955!3.71e-22!69;UBERON:0006238!3.71e-22!69;UBERON:0002780!9.02e-22!41;UBERON:0001890!9.02e-22!41;UBERON:0006240!9.02e-22!41;UBERON:0003080!5.70e-21!42;UBERON:0001950!5.22e-19!20;UBERON:0003075!6.54e-19!86;UBERON:0007284!6.54e-19!86;UBERON:0002619!1.02e-18!22;UBERON:0000956!1.45e-18!25;UBERON:0000203!1.45e-18!25;UBERON:0002346!4.58e-18!90;UBERON:0002020!1.06e-17!34;UBERON:0003528!1.06e-17!34;UBERON:0001893!1.22e-17!34;UBERON:0002791!7.36e-17!33;UBERON:0001869!1.19e-16!32;UBERON:0003056!1.46e-15!61;UBERON:0004121!4.07e-13!169;UBERON:0000924!8.26e-13!173;UBERON:0006601!8.26e-13!173;UBERON:0000033!9.41e-13!123;UBERON:0000153!5.79e-12!129;UBERON:0007811!5.79e-12!129;UBERON:0007023!2.59e-09!115;UBERON:0000483!2.62e-09!309;UBERON:0000025!4.28e-09!194;UBERON:0000119!5.73e-09!312;UBERON:0001871!6.59e-09!7;UBERON:0004111!7.87e-09!241;UBERON:0000477!8.03e-09!286;UBERON:0002021!8.06e-07!5;UBERON:0000468!8.40e-07!659;UBERON:0000922!8.99e-07!612|ontology_enrichment_uberon_v019=UBERON:0001950;1.39e-39;20!UBERON:0002619;6.07e-36;22!UBERON:0000956;1.57e-31;25!UBERON:0000203;1.57e-31;25!UBERON:0001869;1.21e-22;32!UBERON:0002791;5.58e-22;32!UBERON:0002780;1.69e-20;41!UBERON:0001890;1.69e-20;41!UBERON:0002021;5.18e-20;5!UBERON:0001893;1.35e-19;34!UBERON:0003528;5.46e-19;34!UBERON:0002020;5.46e-19;34!UBERON:0001871;4.50e-14;6!UBERON:0000073;4.10e-12;53!UBERON:0002616;4.10e-12;53!UBERON:0001872;8.93e-12;5!UBERON:0001017;1.54e-08;75!UBERON:0001016;1.05e-07;83!UBERON:0001282;2.13e-07;1!UBERON:0007195;2.13e-07;1!UBERON:0009842;2.13e-07;1!UBERON:0003704;2.13e-07;1!UBERON:0001171;2.13e-07;1!UBERON:0001172;2.13e-07;1!UBERON:0003296;3.45e-07;4!UBERON:0010133;3.45e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.76e-39,20;UBERON:0002619,7.50e-36,22;UBERON:0000956,1.89e-31,25;UBERON:0000203,1.89e-31,25;UBERON:0002780,1.41e-25,41;UBERON:0001890,1.41e-25,41;UBERON:0003080,1.41e-25,41;UBERON:0006240,1.41e-25,41;UBERON:0002791,2.72e-24,32;UBERON:0001869,2.72e-24,32;UBERON:0003528,8.99e-23,34;UBERON:0002020,8.99e-23,34;UBERON:0001893,8.99e-23,34;UBERON:0000073,3.14e-22,53;UBERON:0002616,3.14e-22,53;UBERON:0001049,6.73e-21,56;UBERON:0005068,6.73e-21,56;UBERON:0006241,6.73e-21,56;UBERON:0007135,6.73e-21,56;UBERON:0002021,2.44e-20,5;UBERON:0001016,1.36e-17,89;UBERON:0000955,1.90e-16,68;UBERON:0006238,1.90e-16,68;UBERON:0003056,2.05e-16,61;UBERON:0001017,2.22e-15,81;UBERON:0001871,4.70e-14,6;UBERON:0003075,2.15e-13,82;UBERON:0007284,2.15e-13,82;UBERON:0002346,1.22e-12,86;UBERON:0001872,1.16e-11,5;UBERON:0011216,1.31e-10,223;UBERON:0010371,5.88e-10,104;UBERON:0004121,1.29e-08,171;UBERON:0000924,1.29e-08,171;UBERON:0006601,1.29e-08,171;UBERON:0001282,1.18e-07,1;UBERON:0009842,1.18e-07,1;UBERON:0003704,1.18e-07,1;UBERON:0001171,1.18e-07,1;UBERON:0001172,1.18e-07,1;UBERON:0000025,1.77e-07,192;UBERON:0007195,2.66e-07,1;UBERON:0010314,3.05e-07,132;UBERON:0003296,5.22e-07,4;UBERON:0010133,5.22e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.61417158655884,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.772921620136887,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,1.04007436911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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:108217411..108217413,- | |||
|id=chr13:108217411..108217413,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;2.13e-07;1!CL:0002553;2.13e-07;1!CL:0000501;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,1.25e-07,1;CL:0000501,1.25e-07,1;CL:0002553,1.42e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-25!57;UBERON:0005068!1.28e-25!57;UBERON:0006241!1.28e-25!57;UBERON:0007135!1.28e-25!57;UBERON:0000073!3.10e-25!94;UBERON:0001016!3.10e-25!94;UBERON:0001017!2.83e-24!82;UBERON:0002616!9.35e-23!59;UBERON:0005743!2.78e-22!86;UBERON:0000955!3.71e-22!69;UBERON:0006238!3.71e-22!69;UBERON:0002780!9.02e-22!41;UBERON:0001890!9.02e-22!41;UBERON:0006240!9.02e-22!41;UBERON:0003080!5.70e-21!42;UBERON:0001950!5.22e-19!20;UBERON:0003075!6.54e-19!86;UBERON:0007284!6.54e-19!86;UBERON:0002619!1.02e-18!22;UBERON:0000956!1.45e-18!25;UBERON:0000203!1.45e-18!25;UBERON:0002346!4.58e-18!90;UBERON:0002020!1.06e-17!34;UBERON:0003528!1.06e-17!34;UBERON:0001893!1.22e-17!34;UBERON:0002791!7.36e-17!33;UBERON:0001869!1.19e-16!32;UBERON:0003056!1.46e-15!61;UBERON:0004121!4.07e-13!169;UBERON:0000924!8.26e-13!173;UBERON:0006601!8.26e-13!173;UBERON:0000033!9.41e-13!123;UBERON:0000153!5.79e-12!129;UBERON:0007811!5.79e-12!129;UBERON:0007023!2.59e-09!115;UBERON:0000483!2.62e-09!309;UBERON:0000025!4.28e-09!194;UBERON:0000119!5.73e-09!312;UBERON:0001871!6.59e-09!7;UBERON:0004111!7.87e-09!241;UBERON:0000477!8.03e-09!286;UBERON:0002021!8.06e-07!5;UBERON:0000468!8.40e-07!659;UBERON:0000922!8.99e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.39e-39;20!UBERON:0002619;6.07e-36;22!UBERON:0000956;1.57e-31;25!UBERON:0000203;1.57e-31;25!UBERON:0001869;1.21e-22;32!UBERON:0002791;5.58e-22;32!UBERON:0002780;1.69e-20;41!UBERON:0001890;1.69e-20;41!UBERON:0002021;5.18e-20;5!UBERON:0001893;1.35e-19;34!UBERON:0003528;5.46e-19;34!UBERON:0002020;5.46e-19;34!UBERON:0001871;4.50e-14;6!UBERON:0000073;4.10e-12;53!UBERON:0002616;4.10e-12;53!UBERON:0001872;8.93e-12;5!UBERON:0001017;1.54e-08;75!UBERON:0001016;1.05e-07;83!UBERON:0001282;2.13e-07;1!UBERON:0007195;2.13e-07;1!UBERON:0009842;2.13e-07;1!UBERON:0003704;2.13e-07;1!UBERON:0001171;2.13e-07;1!UBERON:0001172;2.13e-07;1!UBERON:0003296;3.45e-07;4!UBERON:0010133;3.45e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.76e-39,20;UBERON:0002619,7.50e-36,22;UBERON:0000956,1.89e-31,25;UBERON:0000203,1.89e-31,25;UBERON:0002780,1.41e-25,41;UBERON:0001890,1.41e-25,41;UBERON:0003080,1.41e-25,41;UBERON:0006240,1.41e-25,41;UBERON:0002791,2.72e-24,32;UBERON:0001869,2.72e-24,32;UBERON:0003528,8.99e-23,34;UBERON:0002020,8.99e-23,34;UBERON:0001893,8.99e-23,34;UBERON:0000073,3.14e-22,53;UBERON:0002616,3.14e-22,53;UBERON:0001049,6.73e-21,56;UBERON:0005068,6.73e-21,56;UBERON:0006241,6.73e-21,56;UBERON:0007135,6.73e-21,56;UBERON:0002021,2.44e-20,5;UBERON:0001016,1.36e-17,89;UBERON:0000955,1.90e-16,68;UBERON:0006238,1.90e-16,68;UBERON:0003056,2.05e-16,61;UBERON:0001017,2.22e-15,81;UBERON:0001871,4.70e-14,6;UBERON:0003075,2.15e-13,82;UBERON:0007284,2.15e-13,82;UBERON:0002346,1.22e-12,86;UBERON:0001872,1.16e-11,5;UBERON:0011216,1.31e-10,223;UBERON:0010371,5.88e-10,104;UBERON:0004121,1.29e-08,171;UBERON:0000924,1.29e-08,171;UBERON:0006601,1.29e-08,171;UBERON:0001282,1.18e-07,1;UBERON:0009842,1.18e-07,1;UBERON:0003704,1.18e-07,1;UBERON:0001171,1.18e-07,1;UBERON:0001172,1.18e-07,1;UBERON:0000025,1.77e-07,192;UBERON:0007195,2.66e-07,1;UBERON:0010314,3.05e-07,132;UBERON:0003296,5.22e-07,4;UBERON:0010133,5.22e-07,4 | |||
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| |||
|short_description=p@chr13:108217411..108217413,- | |||
}} |
Revision as of 01:23, 11 September 2013
Short description: | p@chr13:108217411..108217413, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:108217411..108217413, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 1.25e-07 | 1 |
granulosa cell | 1.25e-07 | 1 |
lung fibroblast | 1.42e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.