FFCP PHASE1:Hg19::chr12:95611536..95611543,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55591|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18258|TSSclassifier=S|UniProt=F8VVS3|association_with_transcript=0bp_to_ENST00000546557,ENST00000547997,ENST00000549002_5end|description=CAGE_peak_4_at_VEZT_5end|id=chr12:95611536..95611543,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.34e-11!115;UBERON:0002616!1.26e-09!59;UBERON:0001049!2.62e-09!57;UBERON:0005068!2.62e-09!57;UBERON:0006241!2.62e-09!57;UBERON:0007135!2.62e-09!57;UBERON:0003080!8.90e-09!42;UBERON:0000073!9.84e-09!94;UBERON:0001016!9.84e-09!94;UBERON:0002780!1.94e-08!41;UBERON:0001890!1.94e-08!41;UBERON:0006240!1.94e-08!41;UBERON:0001017!3.59e-08!82;UBERON:0001893!4.87e-08!34;UBERON:0002020!6.24e-08!34;UBERON:0003528!6.24e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0005743!1.31e-07!86;UBERON:0000924!2.17e-07!173;UBERON:0006601!2.17e-07!173;UBERON:0001869!2.41e-07!32;UBERON:0000955!3.43e-07!69;UBERON:0006238!3.43e-07!69;UBERON:0002346!4.37e-07!90|ontology_enrichment_uberon_v019=UBERON:0001950;1.89e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.88e-10,114;UBERON:0001016,4.89e-09,89;UBERON:0001049,5.28e-08,56;UBERON:0005068,5.28e-08,56;UBERON:0006241,5.28e-08,56;UBERON:0007135,5.28e-08,56;UBERON:0001017,6.86e-08,81;UBERON:0000073,3.32e-07,53;UBERON:0002616,3.32e-07,53;UBERON:0002780,7.28e-07,41;UBERON:0001890,7.28e-07,41;UBERON:0003080,7.28e-07,41;UBERON:0006240,7.28e-07,41|phase1_expression=0.363356758541113,0.428201047781966,0.986680828671798,0,1.34088328328186,0,0,1.26343974685366,0,0.245733936501509,0,0.218441372130172,0.527533956456907,1.11389717664042,1.65698687863958,0,3.01347264011988,1.46062018077475,0,0.369363174230364,0.204000691244253,0.313454721478088,1.14494394852423,0.821246550437305,0.87879847716362,1.45185470921107,1.14940825229924,1.25937250101887,0,1.53531759238885,0.77408061658038,0,0,0,0,0.995184627411951,0.293600439334847,1.10799081706375,1.00272223735071,0.217010870715852,0.895661896959697,0.647787332037959,0.515151135268373,0.581592955118259,0,0.242584061187816,0.697287110717054,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,1.19678194572979,0,0.580418477257168,0.56738522469114,0,0,1.0429658368404,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.150176892841506,0.964353520182481,0,0.39783335439818,0.730656615058536,0,1.09227722252426,0.889509253863555,1.70692089026603,1.20118796110804,0,0.661044872784862,0,0,0.587237189370939,1.91136614062614,2.64342657158052,0.560508562981536,0,0,0.786021525498329,0.205601498999509,0.83593247695339,1.30368906653436,0.473447805734733,1.94826728407911,0.557052284425868,0.589211814949674,0.443067789167242,1.08321545506006,0.896639238079726,1.56071217071854,0.493313713811028,0.552700035571697,0.869409257205157,0.889719378972363,0,0,0.566546713487831,0,0.68725489096526,0.759059076058509,0.318565414324097,0.651083453856419,0.950452044448374,0.752875595388864,1.4078527226986,0,2.60454977248419,2.46338399076314,1.81446068902259,0.534880391567015,1.30341963494519,0,0.670700859703636,0.895037932904712,0.722878304769133,0,1.01392563272577,0,1.45990461090791,0.756278537312543,0.886917589850256,0.87834785693126,0.982343066232845,0,0,0.97364218096405,0.348259474598534,0.398873881556595,0.238490624305342,0,0.74291500265913,0.596287222100115,1.72046919021225,1.04142150482278,1.13061588384802,1.25849830862972,1.10047216776027,0.626984899610432,2.06733407335463,3.20189636418039,1.33888245105868,1.61131726843659,0.760272105718513,0.732186172644509,1.10298924103761,0,1.51809538082936,1.34717623575702,1.23872628531654,0,0,1.28241220751285,0,0,0.436094052142534,0.496971951695318,1.01304409331664,1.85372853138506,1.14734648299525,1.41867352879343,0.560677600142307,0,0,0.311211035399766,1.34710672069688,0.817309515567294,1.05950199351452,1.15235184896,0.234321431833797,0.312160076830321,1.1409436430889,1.49448680551801,1.29177948508141,0.647491777472526,1.12360645361799,1.63323337003915,0.737005903870608,1.23990937410919,1.18800285728205,0.741800787835671,0,0,0.673344455816265,1.25118519871964,0.831192346452549,0.877955241761676,0.30648779579902,0,0.794025282120147,0.89694817844431,1.06778694409284,1.48352330811693,0.900273288253207,1.23663035086127,0.257640540045629,0.930584281657949,0.675105328965065,0.876933046450788,1.00973509697646,0.736399189138395,1.45481451136931,1.06502877754984,0.403008392910561,0.67824236924195,0.966304265816484,1.63647672354501,2.00763216772303,0.121973706129595,0.132529768321485,0.116193942869518,0.41464422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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18258 | |||
|TSSclassifier=S | |||
|UniProt=F8VVS3 | |||
|association_with_transcript=0bp_to_ENST00000546557,ENST00000547997,ENST00000549002_5end | |||
|description=CAGE_peak_4_at_VEZT_5end | |||
|id=chr12:95611536..95611543,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-11!115;UBERON:0002616!1.26e-09!59;UBERON:0001049!2.62e-09!57;UBERON:0005068!2.62e-09!57;UBERON:0006241!2.62e-09!57;UBERON:0007135!2.62e-09!57;UBERON:0003080!8.90e-09!42;UBERON:0000073!9.84e-09!94;UBERON:0001016!9.84e-09!94;UBERON:0002780!1.94e-08!41;UBERON:0001890!1.94e-08!41;UBERON:0006240!1.94e-08!41;UBERON:0001017!3.59e-08!82;UBERON:0001893!4.87e-08!34;UBERON:0002020!6.24e-08!34;UBERON:0003528!6.24e-08!34;UBERON:0002791!1.24e-07!33;UBERON:0005743!1.31e-07!86;UBERON:0000924!2.17e-07!173;UBERON:0006601!2.17e-07!173;UBERON:0001869!2.41e-07!32;UBERON:0000955!3.43e-07!69;UBERON:0006238!3.43e-07!69;UBERON:0002346!4.37e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.89e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.88e-10,114;UBERON:0001016,4.89e-09,89;UBERON:0001049,5.28e-08,56;UBERON:0005068,5.28e-08,56;UBERON:0006241,5.28e-08,56;UBERON:0007135,5.28e-08,56;UBERON:0001017,6.86e-08,81;UBERON:0000073,3.32e-07,53;UBERON:0002616,3.32e-07,53;UBERON:0002780,7.28e-07,41;UBERON:0001890,7.28e-07,41;UBERON:0003080,7.28e-07,41;UBERON:0006240,7.28e-07,41 | |||
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| |||
|short_description=p4@VEZT | |||
}} |
Revision as of 01:05, 11 September 2013
Short description: | p4@VEZT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_VEZT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546557, ENST00000547997, ENST00000549002_5end |
EntrezGene: | VEZT |
HGNC: | 18258 |
UniProt: | F8VVS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.88e-10 | 114 |
nervous system | 4.89e-09 | 89 |
neural tube | 5.28e-08 | 56 |
neural rod | 5.28e-08 | 56 |
future spinal cord | 5.28e-08 | 56 |
neural keel | 5.28e-08 | 56 |
central nervous system | 6.86e-08 | 81 |
regional part of nervous system | 3.32e-07 | 53 |
regional part of brain | 3.32e-07 | 53 |
regional part of forebrain | 7.28e-07 | 41 |
forebrain | 7.28e-07 | 41 |
anterior neural tube | 7.28e-07 | 41 |
future forebrain | 7.28e-07 | 41 |
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