FFCP PHASE1:Hg19::chr12:94542459..94542513,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10154|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9106|TSSclassifier=S|UniProt=O60486|association_with_transcript=0bp_to_ENST00000258526,NM_005761,uc001tdc.2_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_PLXNC1_5end|id=chr12:94542459..94542513,+|ontology_enrichment_celltype=CL:0000738!5.19e-45!140;CL:0000037!1.97e-42!172;CL:0000566!1.97e-42!172;CL:0002032!1.56e-39!165;CL:0000837!1.56e-39!165;CL:0000988!1.35e-38!182;CL:0002087!1.41e-36!119;CL:0002031!6.52e-35!124;CL:0000766!1.73e-30!76;CL:0000763!2.70e-28!112;CL:0000049!2.70e-28!112;CL:0000557!5.44e-27!71;CL:0002009!1.24e-26!65;CL:0002057!5.61e-26!42;CL:0002194!1.19e-25!63;CL:0000576!1.19e-25!63;CL:0000040!1.19e-25!63;CL:0000559!1.19e-25!63;CL:0000839!3.41e-24!70;CL:0000860!2.49e-22!45;CL:0000542!4.23e-10!53;CL:0000051!4.23e-10!53;CL:0000838!4.36e-10!52;CL:0000219!6.09e-10!390;CL:0000134!1.06e-09!358;CL:0002320!1.73e-08!365;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9|ontology_enrichment_celltype_v019=CL:0000473;2.34e-21;39!CL:0000234;2.34e-21;39!CL:0000860;1.16e-20;33!CL:0002057;1.16e-20;33!CL:0000576;1.05e-19;48!CL:0000766;8.32e-17;69!CL:0002087;2.51e-12;104!CL:0000738;1.12e-11;136!CL:0000763;1.37e-10;100!CL:0000988;1.28e-07;177!CL:0000094;1.96e-07;8|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-51,136;CL:0000037,2.47e-47,168;CL:0002032,1.37e-44,161;CL:0000837,1.37e-44,161;CL:0000988,4.90e-44,177;CL:0002087,1.02e-42,115;CL:0002031,2.87e-40,120;CL:0000766,3.96e-39,72;CL:0000557,5.85e-35,67;CL:0002009,6.71e-35,61;CL:0000473,2.72e-34,48;CL:0000234,2.72e-34,48;CL:0000763,3.23e-34,108;CL:0000049,3.23e-34,108;CL:0002194,9.28e-34,59;CL:0000576,9.28e-34,59;CL:0000040,9.28e-34,59;CL:0000559,9.28e-34,59;CL:0000839,4.53e-31,66;CL:0000860,1.58e-29,42;CL:0002057,1.58e-29,42;CL:0000542,1.41e-09,53;CL:0000051,1.41e-09,53;CL:0000838,1.50e-09,52;CL:0002393,2.68e-08,9;CL:0002397,2.68e-08,9;CL:0000134,8.28e-08,354;CL:0000094,2.01e-07,8;CL:0002320,7.01e-07,361;CL:0000219,9.40e-07,386|ontology_enrichment_development_v019=CL:0002057;2.42e-21;42!CL:0000049;1.74e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.70e-33!102;UBERON:0003061!2.70e-33!102;UBERON:0002193!1.21e-28!112;UBERON:0002371!1.68e-23!80;UBERON:0001474!7.41e-22!86;UBERON:0007023!2.04e-21!115;UBERON:0002405!8.37e-21!115;UBERON:0004765!5.46e-18!101;UBERON:0001434!5.46e-18!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15;UBERON:0001049!2.87e-08!57;UBERON:0005068!2.87e-08!57;UBERON:0006241!2.87e-08!57;UBERON:0007135!2.87e-08!57;UBERON:0002384!5.58e-08!375;UBERON:0002204!1.32e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-09;15!UBERON:0000179;3.93e-09;15!UBERON:0000463;3.93e-09;15!UBERON:0002390;7.79e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-41,98;UBERON:0003061,1.18e-41,98;UBERON:0002193,1.93e-36,108;UBERON:0002371,1.07e-30,76;UBERON:0002405,2.37e-28,93;UBERON:0001474,3.97e-26,82;UBERON:0007023,2.83e-21,114;UBERON:0004765,4.08e-21,90;UBERON:0001434,1.20e-19,100;UBERON:0000178,4.51e-09,15;UBERON:0000179,4.51e-09,15;UBERON:0000463,4.51e-09,15;UBERON:0003081,3.16e-08,203;UBERON:0001049,1.94e-07,56;UBERON:0005068,1.94e-07,56;UBERON:0006241,1.94e-07,56;UBERON:0007135,1.94e-07,56;UBERON:0002204,3.06e-07,167|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.136874425072884,0.627713197974014,6.80079311156766,8.6205618922443,6.53299484903538,14.1611139665605,11.1310525448192,30.653592416583,0,0,0,0.852139206383318,0,8.51441274071057,65.3714582067615,63.3720454005648,70.311522111936,93.5966682322884,114.982251436738,131.105963925801,29.9520371885903,28.3406957766607,38.8134497900506,44.8588041227971,22.6142338412004,26.3250415260838,22.1523142088056,11.0149103807513,7.56743135643473,41.0247360076576,32.9197188627751,29.7938270507552,25.9774428568794,19.376336654107,18.2026022400519,45.9125838556354,30.809186599305,42.1962503027367,23.4194423132568,12.7656740877844,15.344091019177,45.2726412260591,34.6104987061595,37.3693349397345,19.597395890026,13.037072960505,11.0766310799609,35.7185706553688,25.7794345191295,28.7980772571205,34.0121010962226,43.3712771928689,45.2862674298092,39.9889926881523,35.591923603437,44.8424386884854,52.727357592131,42.3692522434062,48.9539932089219,14.0796995569058,5.46138611262132,7.11607403090844,8.10787422876364,5.60554381850417,9.19603903927173,3.96626923670917,10.494591299889,7.96898156753228,5.28513470433845,6.49864487812889,11.8954195721123,9.52864557068611,13.1692042387539,3.34406609193516,2.75107533924415,4.93443597598822,3.00935691703221,1.30368906653436,1.4203434172042,0,0.222820913770347,0.589211814949674,0.443067789167242,1.62482318259009,1.5370958367081,0.650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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10154 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9106 | |||
|TSSclassifier=S | |||
|UniProt=O60486 | |||
|association_with_transcript=0bp_to_ENST00000258526,NM_005761,uc001tdc.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_PLXNC1_5end | |||
|id=chr12:94542459..94542513,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.19e-45!140;CL:0000037!1.97e-42!172;CL:0000566!1.97e-42!172;CL:0002032!1.56e-39!165;CL:0000837!1.56e-39!165;CL:0000988!1.35e-38!182;CL:0002087!1.41e-36!119;CL:0002031!6.52e-35!124;CL:0000766!1.73e-30!76;CL:0000763!2.70e-28!112;CL:0000049!2.70e-28!112;CL:0000557!5.44e-27!71;CL:0002009!1.24e-26!65;CL:0002057!5.61e-26!42;CL:0002194!1.19e-25!63;CL:0000576!1.19e-25!63;CL:0000040!1.19e-25!63;CL:0000559!1.19e-25!63;CL:0000839!3.41e-24!70;CL:0000860!2.49e-22!45;CL:0000542!4.23e-10!53;CL:0000051!4.23e-10!53;CL:0000838!4.36e-10!52;CL:0000219!6.09e-10!390;CL:0000134!1.06e-09!358;CL:0002320!1.73e-08!365;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.34e-21;39!CL:0000234;2.34e-21;39!CL:0000860;1.16e-20;33!CL:0002057;1.16e-20;33!CL:0000576;1.05e-19;48!CL:0000766;8.32e-17;69!CL:0002087;2.51e-12;104!CL:0000738;1.12e-11;136!CL:0000763;1.37e-10;100!CL:0000988;1.28e-07;177!CL:0000094;1.96e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-51,136;CL:0000037,2.47e-47,168;CL:0002032,1.37e-44,161;CL:0000837,1.37e-44,161;CL:0000988,4.90e-44,177;CL:0002087,1.02e-42,115;CL:0002031,2.87e-40,120;CL:0000766,3.96e-39,72;CL:0000557,5.85e-35,67;CL:0002009,6.71e-35,61;CL:0000473,2.72e-34,48;CL:0000234,2.72e-34,48;CL:0000763,3.23e-34,108;CL:0000049,3.23e-34,108;CL:0002194,9.28e-34,59;CL:0000576,9.28e-34,59;CL:0000040,9.28e-34,59;CL:0000559,9.28e-34,59;CL:0000839,4.53e-31,66;CL:0000860,1.58e-29,42;CL:0002057,1.58e-29,42;CL:0000542,1.41e-09,53;CL:0000051,1.41e-09,53;CL:0000838,1.50e-09,52;CL:0002393,2.68e-08,9;CL:0002397,2.68e-08,9;CL:0000134,8.28e-08,354;CL:0000094,2.01e-07,8;CL:0002320,7.01e-07,361;CL:0000219,9.40e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-21;42!CL:0000049;1.74e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-33!102;UBERON:0003061!2.70e-33!102;UBERON:0002193!1.21e-28!112;UBERON:0002371!1.68e-23!80;UBERON:0001474!7.41e-22!86;UBERON:0007023!2.04e-21!115;UBERON:0002405!8.37e-21!115;UBERON:0004765!5.46e-18!101;UBERON:0001434!5.46e-18!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15;UBERON:0001049!2.87e-08!57;UBERON:0005068!2.87e-08!57;UBERON:0006241!2.87e-08!57;UBERON:0007135!2.87e-08!57;UBERON:0002384!5.58e-08!375;UBERON:0002204!1.32e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-09;15!UBERON:0000179;3.93e-09;15!UBERON:0000463;3.93e-09;15!UBERON:0002390;7.79e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-41,98;UBERON:0003061,1.18e-41,98;UBERON:0002193,1.93e-36,108;UBERON:0002371,1.07e-30,76;UBERON:0002405,2.37e-28,93;UBERON:0001474,3.97e-26,82;UBERON:0007023,2.83e-21,114;UBERON:0004765,4.08e-21,90;UBERON:0001434,1.20e-19,100;UBERON:0000178,4.51e-09,15;UBERON:0000179,4.51e-09,15;UBERON:0000463,4.51e-09,15;UBERON:0003081,3.16e-08,203;UBERON:0001049,1.94e-07,56;UBERON:0005068,1.94e-07,56;UBERON:0006241,1.94e-07,56;UBERON:0007135,1.94e-07,56;UBERON:0002204,3.06e-07,167 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0.572471974262113,0.136874425072884,0.627713197974014,6.80079311156766,8.6205618922443,6.53299484903538,14.1611139665605,11.1310525448192,30.653592416583,0,0,0,0.852139206383318,0,8.51441274071057,65.3714582067615,63.3720454005648,70.311522111936,93.5966682322884,114.982251436738,131.105963925801,29.9520371885903,28.3406957766607,38.8134497900506,44.8588041227971,22.6142338412004,26.3250415260838,22.1523142088056,11.0149103807513,7.56743135643473,41.0247360076576,32.9197188627751,29.7938270507552,25.9774428568794,19.376336654107,18.2026022400519,45.9125838556354,30.809186599305,42.1962503027367,23.4194423132568,12.7656740877844,15.344091019177,45.2726412260591,34.6104987061595,37.3693349397345,19.597395890026,13.037072960505,11.0766310799609,35.7185706553688,25.7794345191295,28.7980772571205,34.0121010962226,43.3712771928689,45.2862674298092,39.9889926881523,35.591923603437,44.8424386884854,52.727357592131,42.3692522434062,48.9539932089219,14.0796995569058,5.46138611262132,7.11607403090844,8.10787422876364,5.60554381850417,9.19603903927173,3.96626923670917,10.494591299889,7.96898156753228,5.28513470433845,6.49864487812889,11.8954195721123,9.52864557068611,13.1692042387539,3.34406609193516,2.75107533924415,4.93443597598822,3.00935691703221,1.30368906653436,1.4203434172042,0,0.222820913770347,0.589211814949674,0.443067789167242,1.62482318259009,1.5370958367081,0.650296737799391,6.74195408875072,8.84320056914715,3.18783394308558,1.77943875794473,1.33770414044857,1.04535523804977,1.58633079776593,4.21542542962113,3.77990190030893,2.78321661221453,5.09704662918555,4.55758417699493,1.90090408889675,4.66782869141096,3.32765189001488,8.74515085866421,6.62976305723247,4.10563998460523,4.43534835094411,3.7441627409691,2.89648807765598,0,5.36560687762909,1.40648818027883,0,0,0,0.795285947051099,0,0,0,0,4.32230949142452,0,0,2.92092654289215,3.13433527138681,4.52057065764142,7.87019060207628,3.43196946468077,7.4291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,255.654009825963,414.924882638708,0,0.496971951695318,0,0,0.286836620748814,2.12801029319014,0.560677600142307,0,0,1.8672662123986,0.404132016209064,0.326923806226917,1.36221684880438,0,0,0,0,0,0,0,0,0,0,0.103325781175765,15.4440371446667,8.65434252474949,0,0.718618141816238,0,0.125118519871964,0,1.31693286264251,2.45190236639216,9.6152357700222,0,4.48474089222155,7.04739383101272,0.635795703478686,2.40072876867522,0.515262646192195,0.772921620136887,0.558350568994769,0.168776332241266,0.292311015483596,2.77677151668526,2.94559675655358,0.646584227275248,8.52023022039874,2.01504196455281,0.169560592310488,0,0,0,0.975789649036763,0.530119073285941,0.464775771478074,0.725627385107593,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,4.41026134156626,0,2.94848165003288,0.590789906681404,0.882926198829301,2.21379189377604,0,0,0,0.100528972411631,0,1.3032332212413,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,64.2626385888107,47.5028658232653,64.6545555955968,0.93733833986777,0,0,0,0,0,0,0.088048434013226,10.9883901236609,20.1767934783746,2.77733353538036,45.5914881017774,22.5373171079384,31.6487107467127,10.2643467613623,17.0693637887517,60.6692976844713,62.5959887460966,0.224262168690721,0.87192013766656,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,2.28764789853036,0,0.823240336780769,0,2.13235169245527,0,0,0,0,40.1358476115929,63.7866506118801,50.6001454759276,0,1.14861935834114,0,0,0.410952645100767,0.179060963239896,1.00876629594175,5.51686128565396,1.94064817373566,3.9786341246722,2.54094624222463,1.30139853857622,3.09315525111078,2.68026024534958,1.27587750330633,337.802167800179,415.834428293595,573.136655082037,0.12269149171914,0,0,0.415941723061614,0,1.10391690523754,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.955719759148911,0,0,20.263266560043,28.9057029096947,27.1087996820749,0,0,0,0.744323423456331,0,1.68396056659844,0.384417447767103,0,0.321707842287215,0,0,0.355123450626254,0,0,0,1.57117284469109,0,0,0,0.182091168006717,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,5.97637867556789,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.275673144969061,1.6113036730241,1.30515024522806,0.852266274161009,0.712256285173899,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0.953150969619124,0.511795582622668,7.70290178461057,0,0,1.43897966066652,1.64722217841633,1.17812402345686,0,0,0,3.41343617362713,0,0,0.136499911407986,0,0,0,0,0,1.15755106853338,10.4943160327461,0,1.54911749049875,0,0.286822704408103,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,1.34060455107157,0,5.93105944893709,0,0,0,0,51.2522085324491,64.9941626071019,76.9023702685119,35.4965345432106,33.3203441199817,70.6835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| |||
|short_description=p1@PLXNC1 | |||
}} |
Revision as of 01:03, 11 September 2013
Short description: | p1@PLXNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLXNC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000258526, NM_005761, uc001tdc.2_5end |
EntrezGene: | PLXNC1 |
HGNC: | 9106 |
UniProt: | O60486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-41 | 98 |
blood island | 1.18e-41 | 98 |
hemolymphoid system | 1.93e-36 | 108 |
bone marrow | 1.07e-30 | 76 |
immune system | 2.37e-28 | 93 |
bone element | 3.97e-26 | 82 |
adult organism | 2.83e-21 | 114 |
skeletal element | 4.08e-21 | 90 |
skeletal system | 1.20e-19 | 100 |
blood | 4.51e-09 | 15 |
haemolymphatic fluid | 4.51e-09 | 15 |
organism substance | 4.51e-09 | 15 |
lateral plate mesoderm | 3.16e-08 | 203 |
neural tube | 1.94e-07 | 56 |
neural rod | 1.94e-07 | 56 |
future spinal cord | 1.94e-07 | 56 |
neural keel | 1.94e-07 | 56 |
musculoskeletal system | 3.06e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.